RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 TBC1D32Q96NH3 1257 aa24.84■■□□□ 1.57
COL13A1-205ENST00000398978 TMEM57Q8N5G2 664 aa24.83■■□□□ 1.57
COL13A1-205ENST00000398978 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.83■■□□□ 1.57
COL13A1-205ENST00000398978 NEXMIFQ5QGS0 1516 aa24.83■■□□□ 1.57
COL13A1-205ENST00000398978 CABP1Q9NZU7 370 aa24.82■■□□□ 1.56
COL13A1-205ENST00000398978 THUMPD2Q9BTF0 503 aaKnown RBP24.82■■□□□ 1.56
COL13A1-205ENST00000398978 ATF7IPQ6VMQ6 1270 aa24.8■■□□□ 1.56
COL13A1-205ENST00000398978 ABCC11Q96J66 1382 aa24.8■■□□□ 1.56
COL13A1-205ENST00000398978 HMOX1P09601 288 aa24.79■■□□□ 1.56
COL13A1-205ENST00000398978 DIAPH1O60610 1272 aaKnown RBP24.79■■□□□ 1.56
COL13A1-205ENST00000398978 CDK19Q9BWU1 502 aa24.79■■□□□ 1.56
COL13A1-205ENST00000398978 ELL2O00472 640 aaPredicted RBP24.78■■□□□ 1.56
COL13A1-205ENST00000398978 TERF2IPQ9NYB0 399 aa24.78■■□□□ 1.56
COL13A1-205ENST00000398978 NSD2O96028 1365 aa24.78■■□□□ 1.56
COL13A1-205ENST00000398978 YEATS2Q9ULM3 1422 aa24.77■■□□□ 1.56
COL13A1-205ENST00000398978 WAPLQ7Z5K2 1190 aa24.77■■□□□ 1.56
COL13A1-205ENST00000398978 USP32Q8NFA0 1604 aa24.77■■□□□ 1.56
COL13A1-205ENST00000398978 STAG3Q9UJ98 1225 aa24.77■■□□□ 1.56
COL13A1-205ENST00000398978 OSCARQ8IYS5 282 aa24.77■■□□□ 1.56
COL13A1-205ENST00000398978 ANTXR1Q9H6X2 564 aa24.76■■□□□ 1.55
COL13A1-205ENST00000398978 MYO5BQ9ULV0 1848 aa24.76■■□□□ 1.55
COL13A1-205ENST00000398978 LNPKQ9C0E8 428 aa24.75■■□□□ 1.55
COL13A1-205ENST00000398978 C1orf115Q9H7X2 142 aa24.75■■□□□ 1.55
COL13A1-205ENST00000398978 PRKAR2BP31323 418 aa24.75■■□□□ 1.55
COL13A1-205ENST00000398978 C22orf23Q9BZE7 217 aa24.74■■□□□ 1.55
COL13A1-205ENST00000398978 DDX19BQ9UMR2 479 aa24.74■■□□□ 1.55
COL13A1-205ENST00000398978 AAMPQ13685 434 aa24.74■■□□□ 1.55
COL13A1-205ENST00000398978 ADGRB2O60241 1585 aa24.73■■□□□ 1.55
COL13A1-205ENST00000398978 PUS7Q96PZ0 661 aaKnown RBP24.73■■□□□ 1.55
COL13A1-205ENST00000398978 PIK3C2BO00750 1634 aa24.73■■□□□ 1.55
COL13A1-205ENST00000398978 HDGFL2Q7Z4V5 671 aaPredicted RBP24.72■■□□□ 1.55
COL13A1-205ENST00000398978 PHACTR3Q96KR7 559 aa24.72■■□□□ 1.55
COL13A1-205ENST00000398978 GZF1Q9H116 711 aaPredicted RBP24.72■■□□□ 1.55
COL13A1-205ENST00000398978 COL3A1P02461 1466 aaPredicted RBP24.71■■□□□ 1.55
COL13A1-205ENST00000398978 ZRANB1Q9UGI0 708 aa24.71■■□□□ 1.55
COL13A1-205ENST00000398978 CD163L1Q9NR16 1453 aa24.71■■□□□ 1.55
COL13A1-205ENST00000398978 SLC52A1Q9NWF4 448 aa24.7■■□□□ 1.54
COL13A1-205ENST00000398978 YTHDC2Q9H6S0 1430 aaKnown RBP24.69■■□□□ 1.54
COL13A1-205ENST00000398978 PTPRMP28827 1452 aa24.69■■□□□ 1.54
COL13A1-205ENST00000398978 TSPYL6Q8N831 410 aa24.68■■□□□ 1.54
COL13A1-205ENST00000398978 ZBTB40Q9NUA8 1239 aa24.68■■□□□ 1.54
COL13A1-205ENST00000398978 EMILIN1Q9Y6C2 1016 aa24.68■■□□□ 1.54
COL13A1-205ENST00000398978 DIP2CQ9Y2E4 1556 aa24.68■■□□□ 1.54
COL13A1-205ENST00000398978 HDAC1Q13547 482 aaPredicted RBP24.67■■□□□ 1.54
COL13A1-205ENST00000398978 ATAD2Q6PL18 1390 aa24.67■■□□□ 1.54
COL13A1-205ENST00000398978 MLECQ14165 292 aa24.67■■□□□ 1.54
COL13A1-205ENST00000398978 NCKAP5LQ9HCH0 1330 aa24.67■■□□□ 1.54
COL13A1-205ENST00000398978 CT47B1P0C2W7 299 aaPredicted RBP24.66■■□□□ 1.54
COL13A1-205ENST00000398978 POLKQ9UBT6 870 aa24.66■■□□□ 1.54
COL13A1-205ENST00000398978 SMC5Q8IY18 1101 aa24.64■■□□□ 1.54
COL13A1-205ENST00000398978 CFAP74Q9C0B2 1584 aa24.64■■□□□ 1.53
COL13A1-205ENST00000398978 RSPH6AQ9H0K4 717 aa24.63■■□□□ 1.53
COL13A1-205ENST00000398978 NME9Q86XW9 330 aa24.62■■□□□ 1.53
COL13A1-205ENST00000398978 IPO8O15397 1037 aaKnown RBP24.61■■□□□ 1.53
COL13A1-205ENST00000398978 ANKRD45Q5TZF3 282 aa24.61■■□□□ 1.53
COL13A1-205ENST00000398978 KIF16BQ96L93 1317 aa24.61■■□□□ 1.53
COL13A1-205ENST00000398978 FAM83GA6ND36 823 aa24.6■■□□□ 1.53
COL13A1-205ENST00000398978 DCTN1Q14203 1278 aa24.6■■□□□ 1.53
COL13A1-205ENST00000398978 RRS1Q15050 365 aaKnown RBP24.6■■□□□ 1.53
COL13A1-205ENST00000398978 NCBP3Q53F19 620 aaKnown RBP24.6■■□□□ 1.53
COL13A1-205ENST00000398978 FCHSD2O94868 740 aa24.6■■□□□ 1.53
COL13A1-205ENST00000398978 FOXD4L1Q9NU39 408 aa24.6■■□□□ 1.53
COL13A1-205ENST00000398978 IL16Q14005 1332 aa24.59■■□□□ 1.53
COL13A1-205ENST00000398978 LRRC7Q96NW7 1537 aa24.58■■□□□ 1.53
COL13A1-205ENST00000398978 CHD1LQ86WJ1 897 aa24.58■■□□□ 1.53
COL13A1-205ENST00000398978 NUCB1Q02818 461 aa24.58■■□□□ 1.52
COL13A1-205ENST00000398978 ARHGAP31Q2M1Z3 1444 aa24.57■■□□□ 1.52
COL13A1-205ENST00000398978 TMEM131LA2VDJ0 1609 aa24.57■■□□□ 1.52
COL13A1-205ENST00000398978 VAMP4O75379 141 aa24.56■■□□□ 1.52
COL13A1-205ENST00000398978 PNPLA6Q8IY17 1366 aa24.56■■□□□ 1.52
COL13A1-205ENST00000398978 MCM4P33991 863 aa24.56■■□□□ 1.52
COL13A1-205ENST00000398978 ZFYVE9O95405 1425 aa24.55■■□□□ 1.52
COL13A1-205ENST00000398978 CYB5RLQ6IPT4 315 aa24.55■■□□□ 1.52
COL13A1-205ENST00000398978 NEO1Q92859 1461 aa24.55■■□□□ 1.52
COL13A1-205ENST00000398978 HSCBQ8IWL3 235 aa24.55■■□□□ 1.52
COL13A1-205ENST00000398978 MBIPQ9NS73 344 aa24.55■■□□□ 1.52
COL13A1-205ENST00000398978 NFE2L2Q16236 605 aa24.54■■□□□ 1.52
COL13A1-205ENST00000398978 TXNDC2Q86VQ3 553 aa24.54■■□□□ 1.52
COL13A1-205ENST00000398978 PNNQ9H307 717 aaKnown RBP24.54■■□□□ 1.52
COL13A1-205ENST00000398978 ZMYM3Q14202 1370 aa24.54■■□□□ 1.52
COL13A1-205ENST00000398978 ALKQ9UM73 1620 aa24.54■■□□□ 1.52
COL13A1-205ENST00000398978 ZBTB7BO15156 539 aaPredicted RBP24.53■■□□□ 1.52
COL13A1-205ENST00000398978 ARHGEF40Q8TER5 1519 aa24.53■■□□□ 1.52
COL13A1-205ENST00000398978 MRPL50Q8N5N7 158 aaKnown RBP24.53■■□□□ 1.52
COL13A1-205ENST00000398978 C8orf58Q8NAV2 365 aa24.53■■□□□ 1.52
COL13A1-205ENST00000398978 PREX1Q8TCU6 1659 aa24.53■■□□□ 1.52
COL13A1-205ENST00000398978 ALDH1L2Q3SY69 923 aa24.53■■□□□ 1.52
COL13A1-205ENST00000398978 NUTM2FA1L443 756 aa24.52■■□□□ 1.52
COL13A1-205ENST00000398978 PPIP5K1Q6PFW1 1433 aa24.51■■□□□ 1.51
COL13A1-205ENST00000398978 SIRT2Q8IXJ6 389 aa24.51■■□□□ 1.51
COL13A1-205ENST00000398978 RBM42Q9BTD8 480 aaKnown RBP24.51■■□□□ 1.51
COL13A1-205ENST00000398978 CHMP5Q9NZZ3 219 aa24.51■■□□□ 1.51
COL13A1-205ENST00000398978 PANK2Q9BZ23 570 aa24.5■■□□□ 1.51
COL13A1-205ENST00000398978 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
COL13A1-205ENST00000398978 KRT24Q2M2I5 525 aa24.5■■□□□ 1.51
COL13A1-205ENST00000398978 RICTORQ6R327 1708 aa24.49■■□□□ 1.51
COL13A1-205ENST00000398978 CD2BP2O95400 341 aaKnown RBP24.49■■□□□ 1.51
COL13A1-205ENST00000398978 TWISTNBQ3B726 338 aaPredicted RBP24.49■■□□□ 1.51
COL13A1-205ENST00000398978 MAP2P11137 1827 aaKnown RBP24.49■■□□□ 1.51
COL13A1-205ENST00000398978 SOX12O15370 315 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms