RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 STRCQ7RTU9 1775 aa30.82■■■□□ 2.52
CDH23-206ENST00000398842 NME9Q86XW9 330 aa30.82■■■□□ 2.52
CDH23-206ENST00000398842 COL3A1P02461 1466 aaPredicted RBP30.82■■■□□ 2.52
CDH23-206ENST00000398842 USP6P35125 1406 aa30.81■■■□□ 2.52
CDH23-206ENST00000398842 NEFLP07196 543 aa30.79■■■□□ 2.52
CDH23-206ENST00000398842 CCDC146Q8IYE0 955 aa30.78■■■□□ 2.52
CDH23-206ENST00000398842 SSH2Q76I76 1423 aa30.78■■■□□ 2.52
CDH23-206ENST00000398842 MAP2P11137 1827 aaKnown RBP30.78■■■□□ 2.52
CDH23-206ENST00000398842 FKBP8Q14318 412 aa30.77■■■□□ 2.52
CDH23-206ENST00000398842 TTC21BQ7Z4L5 1316 aa30.77■■■□□ 2.52
CDH23-206ENST00000398842 PNPLA6Q8IY17 1366 aa30.77■■■□□ 2.52
CDH23-206ENST00000398842 ADGRL3Q9HAR2 1447 aa30.77■■■□□ 2.52
CDH23-206ENST00000398842 ZRANB1Q9UGI0 708 aa30.76■■■□□ 2.51
CDH23-206ENST00000398842 AATKQ6ZMQ8 1374 aa30.74■■■□□ 2.51
CDH23-206ENST00000398842 ZNF521Q96K83 1311 aa30.74■■■□□ 2.51
CDH23-206ENST00000398842 PMFBP1Q8TBY8 1022 aa30.73■■■□□ 2.51
CDH23-206ENST00000398842 COG3Q96JB2 828 aa30.73■■■□□ 2.51
CDH23-206ENST00000398842 POLKQ9UBT6 870 aa30.72■■■□□ 2.51
CDH23-206ENST00000398842 APAF1O14727 1248 aa30.71■■■□□ 2.51
CDH23-206ENST00000398842 RBM33Q96EV2 1170 aaKnown RBP30.7■■■□□ 2.51
CDH23-206ENST00000398842 CDCA7LQ96GN5 454 aa30.7■■■□□ 2.51
CDH23-206ENST00000398842 OVOS2A0A0J9YW53 1432 aa30.7■■■□□ 2.5
CDH23-206ENST00000398842 OVOS2Q6IE36 1432 aa30.7■■■□□ 2.5
CDH23-206ENST00000398842 NGEFQ8N5V2 710 aa30.69■■■□□ 2.5
CDH23-206ENST00000398842 AEBP2Q6ZN18 517 aaPredicted RBP30.69■■■□□ 2.5
CDH23-206ENST00000398842 IQSEC2Q5JU85 1478 aa30.68■■■□□ 2.5
CDH23-206ENST00000398842 FBLN1P23142 703 aa30.68■■■□□ 2.5
CDH23-206ENST00000398842 NGDNQ8NEJ9 315 aaKnown RBP30.68■■■□□ 2.5
CDH23-206ENST00000398842 RUNDC1Q96C34 613 aa30.68■■■□□ 2.5
CDH23-206ENST00000398842 TTC21AQ8NDW8 1320 aa30.68■■■□□ 2.5
CDH23-206ENST00000398842 DIAPH1O60610 1272 aaKnown RBP30.64■■■□□ 2.5
CDH23-206ENST00000398842 U2AF1L5P0DN76 240 aaPredicted RBP30.64■■■□□ 2.5
CDH23-206ENST00000398842 U2AF1Q01081 240 aaKnown RBP eCLIP30.64■■■□□ 2.5
CDH23-206ENST00000398842 CDK12Q9NYV4 1490 aaPredicted RBP30.64■■■□□ 2.5
CDH23-206ENST00000398842 RNF123Q5XPI4 1314 aa30.63■■■□□ 2.49
CDH23-206ENST00000398842 EMILIN1Q9Y6C2 1016 aa30.62■■■□□ 2.49
CDH23-206ENST00000398842 STRCP1A6NGW2 1772 aa30.62■■■□□ 2.49
CDH23-206ENST00000398842 PIK3C2AO00443 1686 aa30.61■■■□□ 2.49
CDH23-206ENST00000398842 USP31Q70CQ4 1352 aa30.61■■■□□ 2.49
CDH23-206ENST00000398842 PROSER2Q86WR7 435 aaPredicted RBP30.6■■■□□ 2.49
CDH23-206ENST00000398842 GOLGA2Q08379 1002 aa30.59■■■□□ 2.49
CDH23-206ENST00000398842 U2SURPO15042 1029 aaKnown RBP30.59■■■□□ 2.49
CDH23-206ENST00000398842 PPM1GO15355 546 aaPredicted RBP30.58■■■□□ 2.49
CDH23-206ENST00000398842 TCP11L2Q8N4U5 519 aa30.58■■■□□ 2.49
CDH23-206ENST00000398842 PHF8Q9UPP1 1060 aa30.58■■■□□ 2.49
CDH23-206ENST00000398842 C14orf37Q86TY3 774 aa30.57■■■□□ 2.48
CDH23-206ENST00000398842 DMRT2Q9Y5R5 561 aa30.57■■■□□ 2.48
CDH23-206ENST00000398842 USP54Q70EL1 1684 aa30.57■■■□□ 2.48
CDH23-206ENST00000398842 RRS1Q15050 365 aaKnown RBP30.56■■■□□ 2.48
CDH23-206ENST00000398842 NCBP3Q53F19 620 aaKnown RBP30.56■■■□□ 2.48
CDH23-206ENST00000398842 PLEKHF1Q96S99 279 aa30.56■■■□□ 2.48
CDH23-206ENST00000398842 IRX6P78412 446 aaPredicted RBP30.54■■■□□ 2.48
CDH23-206ENST00000398842 SLFN5Q08AF3 891 aa30.54■■■□□ 2.48
CDH23-206ENST00000398842 DUSP27Q5VZP5 1158 aa30.54■■■□□ 2.48
CDH23-206ENST00000398842 ZNF335Q9H4Z2 1342 aaPredicted RBP30.54■■■□□ 2.48
CDH23-206ENST00000398842 TRMT2AQ8IZ69 625 aaKnown RBP30.54■■■□□ 2.48
CDH23-206ENST00000398842 PHF23Q9BUL5 403 aaPredicted RBP30.54■■■□□ 2.48
CDH23-206ENST00000398842 MARF1Q9Y4F3 1742 aaKnown RBP30.53■■■□□ 2.48
CDH23-206ENST00000398842 ERICH6BQ5W0A0 696 aa30.52■■■□□ 2.48
CDH23-206ENST00000398842 WWC1Q8IX03 1113 aa30.52■■■□□ 2.48
CDH23-206ENST00000398842 RCAN3Q9UKA8 241 aa30.52■■■□□ 2.48
CDH23-206ENST00000398842 IL13P35225 146 aa30.51■■■□□ 2.48
CDH23-206ENST00000398842 NCOA3Q9Y6Q9 1424 aa30.5■■■□□ 2.47
CDH23-206ENST00000398842 CCDC27Q2M243 656 aa30.5■■■□□ 2.47
CDH23-206ENST00000398842 PEAK1Q9H792 1746 aa30.5■■■□□ 2.47
CDH23-206ENST00000398842 LRRC7Q96NW7 1537 aa30.5■■■□□ 2.47
CDH23-206ENST00000398842 C19orf44Q9H6X5 657 aa30.49■■■□□ 2.47
CDH23-206ENST00000398842 RRP7AQ9Y3A4 280 aaKnown RBP30.49■■■□□ 2.47
CDH23-206ENST00000398842 ESCO1Q5FWF5 840 aa30.49■■■□□ 2.47
CDH23-206ENST00000398842 FCHSD2O94868 740 aa30.48■■■□□ 2.47
CDH23-206ENST00000398842 PNNQ9H307 717 aaKnown RBP30.48■■■□□ 2.47
CDH23-206ENST00000398842 SPINK5Q9NQ38 1064 aaPredicted RBP30.48■■■□□ 2.47
CDH23-206ENST00000398842 TMEM94Q12767 1356 aa30.47■■■□□ 2.47
CDH23-206ENST00000398842 E9PSI1 815 aa30.46■■■□□ 2.47
CDH23-206ENST00000398842 NEUROD2Q15784 382 aa30.46■■■□□ 2.47
CDH23-206ENST00000398842 RSPH6AQ9H0K4 717 aa30.45■■■□□ 2.46
CDH23-206ENST00000398842 NLRP6P59044 892 aa30.43■■■□□ 2.46
CDH23-206ENST00000398842 DCCP43146 1447 aa30.43■■■□□ 2.46
CDH23-206ENST00000398842 C1orf167Q5SNV9 1468 aa30.43■■■□□ 2.46
CDH23-206ENST00000398842 WDR63Q8IWG1 891 aa30.43■■■□□ 2.46
CDH23-206ENST00000398842 ORAI2Q96SN7 254 aa30.43■■■□□ 2.46
CDH23-206ENST00000398842 MAPK8IP3Q9UPT6 1336 aa30.43■■■□□ 2.46
CDH23-206ENST00000398842 KIF1AQ12756 1690 aa30.42■■■□□ 2.46
CDH23-206ENST00000398842 TMPOP42166 694 aaKnown RBP30.41■■■□□ 2.46
CDH23-206ENST00000398842 RRP1P56182 461 aaKnown RBP30.41■■■□□ 2.46
CDH23-206ENST00000398842 ABTB2Q8N961 1025 aa30.41■■■□□ 2.46
CDH23-206ENST00000398842 MAP3K19Q56UN5 1328 aa30.4■■■□□ 2.46
CDH23-206ENST00000398842 PAK3O75914 559 aaPredicted RBP30.4■■■□□ 2.46
CDH23-206ENST00000398842 PSME1Q06323 249 aa30.39■■■□□ 2.46
CDH23-206ENST00000398842 XIRP1Q702N8 1843 aaKnown RBP30.39■■■□□ 2.45
CDH23-206ENST00000398842 SBNO1A3KN83 1393 aa30.38■■■□□ 2.45
CDH23-206ENST00000398842 PRKAR2BP31323 418 aa30.38■■■□□ 2.45
CDH23-206ENST00000398842 EIF4A2Q14240 407 aaKnown RBP30.38■■■□□ 2.45
CDH23-206ENST00000398842 RGPD1P0DJD0 1748 aa30.37■■■□□ 2.45
CDH23-206ENST00000398842 MST1RQ04912 1400 aa30.37■■■□□ 2.45
CDH23-206ENST00000398842 SOX12O15370 315 aa30.37■■■□□ 2.45
CDH23-206ENST00000398842 HMOX1P09601 288 aa30.36■■■□□ 2.45
CDH23-206ENST00000398842 NUTM2GQ5VZR2 741 aa30.36■■■□□ 2.45
CDH23-206ENST00000398842 TRPM3Q9HCF6 1732 aaPredicted RBP30.35■■■□□ 2.45
CDH23-206ENST00000398842 HSP90AB2PQ58FF8 381 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms