RNA–Protein interactions for RNA: ENST00000398138.4

RDH16-202, Transcript of retinol dehydrogenase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH16, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16-202ENST00000398138 ZMYM3Q14202 1370 aa16.53■□□□□ 0.24
RDH16-202ENST00000398138 CLUAP1Q96AJ1 413 aa16.53■□□□□ 0.24
RDH16-202ENST00000398138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.52■□□□□ 0.24
RDH16-202ENST00000398138 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
RDH16-202ENST00000398138 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.24
RDH16-202ENST00000398138 DIAPH1O60610 1272 aaKnown RBP16.51■□□□□ 0.23
RDH16-202ENST00000398138 TMPOP42166 694 aaKnown RBP16.51■□□□□ 0.23
RDH16-202ENST00000398138 RGS3P49796 1198 aa16.51■□□□□ 0.23
RDH16-202ENST00000398138 METP08581 1390 aa16.5■□□□□ 0.23
RDH16-202ENST00000398138 PNPLA6Q8IY17 1366 aa16.5■□□□□ 0.23
RDH16-202ENST00000398138 IGHDP01880 384 aa16.5■□□□□ 0.23
RDH16-202ENST00000398138 FAM161AQ3B820 660 aa16.49■□□□□ 0.23
RDH16-202ENST00000398138 TSR2Q969E8 191 aaKnown RBP16.49■□□□□ 0.23
RDH16-202ENST00000398138 TRIM35Q9UPQ4 493 aa16.48■□□□□ 0.23
RDH16-202ENST00000398138 WASLO00401 505 aaPredicted RBP16.48■□□□□ 0.23
RDH16-202ENST00000398138 RLBP1P12271 317 aa16.48■□□□□ 0.23
RDH16-202ENST00000398138 TNNQ9UQP3 1299 aa16.48■□□□□ 0.23
RDH16-202ENST00000398138 PPIP5K1Q6PFW1 1433 aa16.47■□□□□ 0.23
RDH16-202ENST00000398138 NBR1Q14596 966 aa16.47■□□□□ 0.23
RDH16-202ENST00000398138 C8orf34Q49A92 452 aa16.47■□□□□ 0.23
RDH16-202ENST00000398138 TXNDC2Q86VQ3 553 aa16.47■□□□□ 0.23
RDH16-202ENST00000398138 TNRQ92752 1358 aa16.47■□□□□ 0.23
RDH16-202ENST00000398138 PNNQ9H307 717 aaKnown RBP16.47■□□□□ 0.23
RDH16-202ENST00000398138 KNDC1Q76NI1 1749 aa16.47■□□□□ 0.23
RDH16-202ENST00000398138 CDC42BPGQ6DT37 1551 aa16.46■□□□□ 0.23
RDH16-202ENST00000398138 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
RDH16-202ENST00000398138 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.23
RDH16-202ENST00000398138 RIPK4P57078 832 aa16.46■□□□□ 0.23
RDH16-202ENST00000398138 EDC4Q6P2E9 1401 aaKnown RBP16.46■□□□□ 0.22
RDH16-202ENST00000398138 LRRC7Q96NW7 1537 aa16.45■□□□□ 0.22
RDH16-202ENST00000398138 FBLN1P23142 703 aa16.45■□□□□ 0.22
RDH16-202ENST00000398138 HDGFP51858 240 aaKnown RBP16.45■□□□□ 0.22
RDH16-202ENST00000398138 AAMPQ13685 434 aa16.45■□□□□ 0.22
RDH16-202ENST00000398138 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
RDH16-202ENST00000398138 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
RDH16-202ENST00000398138 FAM135BQ49AJ0 1406 aa16.44■□□□□ 0.22
RDH16-202ENST00000398138 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
RDH16-202ENST00000398138 IL16Q14005 1332 aa16.44■□□□□ 0.22
RDH16-202ENST00000398138 TECPR2O15040 1411 aa16.44■□□□□ 0.22
RDH16-202ENST00000398138 DDRGK1Q96HY6 314 aa16.44■□□□□ 0.22
RDH16-202ENST00000398138 CPS1P31327 1500 aa16.43■□□□□ 0.22
RDH16-202ENST00000398138 FCHSD2O94868 740 aa16.43■□□□□ 0.22
RDH16-202ENST00000398138 UBR1Q8IWV7 1749 aa16.43■□□□□ 0.22
RDH16-202ENST00000398138 MAP2P11137 1827 aaKnown RBP16.43■□□□□ 0.22
RDH16-202ENST00000398138 ZKSCAN2Q63HK3 967 aa16.43■□□□□ 0.22
RDH16-202ENST00000398138 PMFBP1Q8TBY8 1022 aa16.43■□□□□ 0.22
RDH16-202ENST00000398138 NUDT16Q96DE0 195 aaKnown RBP16.43■□□□□ 0.22
RDH16-202ENST00000398138 SMC4Q9NTJ3 1288 aa16.43■□□□□ 0.22
RDH16-202ENST00000398138 TMEM2Q9UHN6 1383 aa16.42■□□□□ 0.22
RDH16-202ENST00000398138 NME9Q86XW9 330 aa16.42■□□□□ 0.22
RDH16-202ENST00000398138 FTSJ3Q8IY81 847 aaKnown RBP16.42■□□□□ 0.22
RDH16-202ENST00000398138 PRKAR2BP31323 418 aa16.41■□□□□ 0.22
RDH16-202ENST00000398138 MVPQ14764 893 aaKnown RBP16.41■□□□□ 0.22
RDH16-202ENST00000398138 RSPH6AQ9H0K4 717 aa16.41■□□□□ 0.22
RDH16-202ENST00000398138 PCDHB15Q9Y5E8 787 aa16.41■□□□□ 0.22
RDH16-202ENST00000398138 NEFMP07197 916 aa16.4■□□□□ 0.22
RDH16-202ENST00000398138 SIRT1Q96EB6 747 aa16.4■□□□□ 0.22
RDH16-202ENST00000398138 EMILIN1Q9Y6C2 1016 aa16.4■□□□□ 0.22
RDH16-202ENST00000398138 NCKAP5LQ9HCH0 1330 aa16.4■□□□□ 0.22
RDH16-202ENST00000398138 MON2Q7Z3U7 1717 aa16.4■□□□□ 0.22
RDH16-202ENST00000398138 DZIP1LQ8IYY4 767 aaKnown RBP16.4■□□□□ 0.22
RDH16-202ENST00000398138 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
RDH16-202ENST00000398138 SSH1Q8WYL5 1049 aa16.39■□□□□ 0.21
RDH16-202ENST00000398138 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
RDH16-202ENST00000398138 CDK12Q9NYV4 1490 aaPredicted RBP16.38■□□□□ 0.21
RDH16-202ENST00000398138 VIRMAQ69YN4 1812 aaKnown RBP16.38■□□□□ 0.21
RDH16-202ENST00000398138 ITSN1Q15811 1721 aa16.38■□□□□ 0.21
RDH16-202ENST00000398138 HMOX1P09601 288 aa16.38■□□□□ 0.21
RDH16-202ENST00000398138 COG3Q96JB2 828 aa16.37■□□□□ 0.21
RDH16-202ENST00000398138 AKAP12Q02952 1782 aa16.37■□□□□ 0.21
RDH16-202ENST00000398138 AATKQ6ZMQ8 1374 aa16.37■□□□□ 0.21
RDH16-202ENST00000398138 ROBO2Q9HCK4 1378 aa16.37■□□□□ 0.21
RDH16-202ENST00000398138 TRIM27P14373 513 aa16.37■□□□□ 0.21
RDH16-202ENST00000398138 ADAMTS13Q76LX8 1427 aa16.37■□□□□ 0.21
RDH16-202ENST00000398138 RWDD1Q9H446 243 aaPredicted RBP16.36■□□□□ 0.21
RDH16-202ENST00000398138 C3P01024 1663 aa16.36■□□□□ 0.21
RDH16-202ENST00000398138 IL13P35225 146 aa16.36■□□□□ 0.21
RDH16-202ENST00000398138 PRR36Q9H6K5 1346 aa16.36■□□□□ 0.21
RDH16-202ENST00000398138 LAS1LQ9Y4W2 734 aaKnown RBP16.36■□□□□ 0.21
RDH16-202ENST00000398138 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
RDH16-202ENST00000398138 RTL5Q5HYW3 569 aaPredicted RBP16.35■□□□□ 0.21
RDH16-202ENST00000398138 ATF7IPQ6VMQ6 1270 aa16.35■□□□□ 0.21
RDH16-202ENST00000398138 PHACTR3Q96KR7 559 aa16.35■□□□□ 0.21
RDH16-202ENST00000398138 NOB1Q9ULX3 412 aaKnown RBP16.35■□□□□ 0.21
RDH16-202ENST00000398138 RRS1Q15050 365 aaKnown RBP16.34■□□□□ 0.21
RDH16-202ENST00000398138 PLEKHG1Q9ULL1 1385 aa16.34■□□□□ 0.21
RDH16-202ENST00000398138 ITPRIPQ8IWB1 547 aa16.34■□□□□ 0.21
RDH16-202ENST00000398138 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
RDH16-202ENST00000398138 KIF16BQ96L93 1317 aa16.33■□□□□ 0.2
RDH16-202ENST00000398138 LTKP29376 864 aa16.33■□□□□ 0.2
RDH16-202ENST00000398138 DDX19BQ9UMR2 479 aa16.33■□□□□ 0.2
RDH16-202ENST00000398138 PDZRN3Q9UPQ7 1066 aa16.33■□□□□ 0.2
RDH16-202ENST00000398138 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.32■□□□□ 0.2
RDH16-202ENST00000398138 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
RDH16-202ENST00000398138 ALDH1L2Q3SY69 923 aa16.31■□□□□ 0.2
RDH16-202ENST00000398138 THUMPD2Q9BTF0 503 aaKnown RBP16.31■□□□□ 0.2
RDH16-202ENST00000398138 IPO8O15397 1037 aaKnown RBP16.3■□□□□ 0.2
RDH16-202ENST00000398138 SLC4A3P48751 1232 aa16.3■□□□□ 0.2
RDH16-202ENST00000398138 CEBPAP49715 358 aaPredicted RBP16.3■□□□□ 0.2
RDH16-202ENST00000398138 CALD1Q05682 793 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms