RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 ESPNB1AK53 854 aa21.77■■□□□ 1.08
EWSR1-206ENST00000397938 TNPO1Q92973 898 aaKnown RBP21.77■■□□□ 1.08
EWSR1-206ENST00000397938 ABCC11Q96J66 1382 aa21.77■■□□□ 1.08
EWSR1-206ENST00000397938 ZBTB40Q9NUA8 1239 aa21.77■■□□□ 1.08
EWSR1-206ENST00000397938 TMEM57Q8N5G2 664 aa21.76■■□□□ 1.07
EWSR1-206ENST00000397938 NOB1Q9ULX3 412 aaKnown RBP21.76■■□□□ 1.07
EWSR1-206ENST00000397938 ERBB4Q15303 1308 aa21.75■■□□□ 1.07
EWSR1-206ENST00000397938 HSP90AA1P07900 732 aaKnown RBP21.75■■□□□ 1.07
EWSR1-206ENST00000397938 NUCB1Q02818 461 aa21.75■■□□□ 1.07
EWSR1-206ENST00000397938 PLEKHF1Q96S99 279 aa21.75■■□□□ 1.07
EWSR1-206ENST00000397938 TRIM35Q9UPQ4 493 aa21.75■■□□□ 1.07
EWSR1-206ENST00000397938 CFAP74Q9C0B2 1584 aa21.75■■□□□ 1.07
EWSR1-206ENST00000397938 TULP4Q9NRJ4 1543 aa21.75■■□□□ 1.07
EWSR1-206ENST00000397938 TMPOP42166 694 aaKnown RBP21.74■■□□□ 1.07
EWSR1-206ENST00000397938 GLIPR1L2Q4G1C9 344 aa21.74■■□□□ 1.07
EWSR1-206ENST00000397938 GBP4Q96PP9 640 aa21.74■■□□□ 1.07
EWSR1-206ENST00000397938 PUS7Q96PZ0 661 aaKnown RBP21.74■■□□□ 1.07
EWSR1-206ENST00000397938 IL16Q14005 1332 aa21.74■■□□□ 1.07
EWSR1-206ENST00000397938 RAB3GAP1Q15042 981 aa21.74■■□□□ 1.07
EWSR1-206ENST00000397938 COL3A1P02461 1466 aaPredicted RBP21.73■■□□□ 1.07
EWSR1-206ENST00000397938 RRP9O43818 475 aaKnown RBP21.73■■□□□ 1.07
EWSR1-206ENST00000397938 HSP90AB1P08238 724 aaKnown RBP21.73■■□□□ 1.07
EWSR1-206ENST00000397938 KIF16BQ96L93 1317 aa21.72■■□□□ 1.07
EWSR1-206ENST00000397938 SKOR2Q2VWA4 1001 aaPredicted RBP21.72■■□□□ 1.07
EWSR1-206ENST00000397938 GAS2L3Q86XJ1 694 aa21.72■■□□□ 1.07
EWSR1-206ENST00000397938 GLI2P10070 1586 aa21.72■■□□□ 1.07
EWSR1-206ENST00000397938 PTMSP20962 102 aa21.72■■□□□ 1.07
EWSR1-206ENST00000397938 TMEM132EQ6IEE7 984 aa21.72■■□□□ 1.07
EWSR1-206ENST00000397938 CHGAP10645 457 aaKnown RBP21.71■■□□□ 1.07
EWSR1-206ENST00000397938 ARHGEF28Q8N1W1 1705 aaKnown RBP21.71■■□□□ 1.07
EWSR1-206ENST00000397938 LNPKQ9C0E8 428 aa21.71■■□□□ 1.07
EWSR1-206ENST00000397938 EVC2Q86UK5 1308 aa21.7■■□□□ 1.06
EWSR1-206ENST00000397938 HSP90AA2PQ14568 343 aaPredicted RBP21.7■■□□□ 1.06
EWSR1-206ENST00000397938 BMP2KLQ5H9B9 411 aa21.7■■□□□ 1.06
EWSR1-206ENST00000397938 CHD1LQ86WJ1 897 aa21.7■■□□□ 1.06
EWSR1-206ENST00000397938 TRIM44Q96DX7 344 aaPredicted RBP21.7■■□□□ 1.06
EWSR1-206ENST00000397938 IPO8O15397 1037 aaKnown RBP21.69■■□□□ 1.06
EWSR1-206ENST00000397938 KIF2CQ99661 725 aa21.69■■□□□ 1.06
EWSR1-206ENST00000397938 U2SURPO15042 1029 aaKnown RBP21.68■■□□□ 1.06
EWSR1-206ENST00000397938 KIDINS220Q9ULH0 1771 aa21.68■■□□□ 1.06
EWSR1-206ENST00000397938 MED14O60244 1454 aa21.67■■□□□ 1.06
EWSR1-206ENST00000397938 ALDH1L2Q3SY69 923 aa21.65■■□□□ 1.06
EWSR1-206ENST00000397938 NPATQ14207 1427 aa21.65■■□□□ 1.06
EWSR1-206ENST00000397938 RPGRIP1LQ68CZ1 1315 aa21.64■■□□□ 1.06
EWSR1-206ENST00000397938 ANKRD26Q9UPS8 1709 aa21.64■■□□□ 1.05
EWSR1-206ENST00000397938 CD2BP2O95400 341 aaKnown RBP21.64■■□□□ 1.05
EWSR1-206ENST00000397938 K7ELQ4 463 aaPredicted RBP21.63■■□□□ 1.05
EWSR1-206ENST00000397938 A0A1W2PP64 1363 aa21.63■■□□□ 1.05
EWSR1-206ENST00000397938 RIPK4P57078 832 aa21.63■■□□□ 1.05
EWSR1-206ENST00000397938 CFAP65Q6ZU64 1925 aaKnown RBP21.62■■□□□ 1.05
EWSR1-206ENST00000397938 CABP2Q9NPB3 220 aa21.62■■□□□ 1.05
EWSR1-206ENST00000397938 PPIP5K1Q6PFW1 1433 aa21.61■■□□□ 1.05
EWSR1-206ENST00000397938 GCC1Q96CN9 775 aa21.61■■□□□ 1.05
EWSR1-206ENST00000397938 CCDC173Q0VFZ6 552 aa21.6■■□□□ 1.05
EWSR1-206ENST00000397938 CLEC17AQ6ZS10 378 aa21.6■■□□□ 1.05
EWSR1-206ENST00000397938 CAMSAP1Q5T5Y3 1602 aa21.6■■□□□ 1.05
EWSR1-206ENST00000397938 REREQ9P2R6 1566 aa21.6■■□□□ 1.05
EWSR1-206ENST00000397938 IBTKQ9P2D0 1353 aaPredicted RBP21.6■■□□□ 1.05
EWSR1-206ENST00000397938 BRPF1P55201 1214 aaPredicted RBP21.6■■□□□ 1.05
EWSR1-206ENST00000397938 TBC1D9Q6ZT07 1266 aa21.6■■□□□ 1.05
EWSR1-206ENST00000397938 FOXD4L1Q9NU39 408 aa21.6■■□□□ 1.05
EWSR1-206ENST00000397938 TPM2P07951 284 aa21.59■■□□□ 1.05
EWSR1-206ENST00000397938 ANKRD45Q5TZF3 282 aa21.59■■□□□ 1.05
EWSR1-206ENST00000397938 PPP1R9BQ96SB3 815 aa21.59■■□□□ 1.05
EWSR1-206ENST00000397938 GGNBP2Q9H3C7 697 aa21.59■■□□□ 1.05
EWSR1-206ENST00000397938 SSFA2P28290 1259 aa21.58■■□□□ 1.05
EWSR1-206ENST00000397938 GOLGA6L22H0YM25 854 aa21.57■■□□□ 1.04
EWSR1-206ENST00000397938 ZNF428Q96B54 188 aa21.57■■□□□ 1.04
EWSR1-206ENST00000397938 PIK3R4Q99570 1358 aa21.57■■□□□ 1.04
EWSR1-206ENST00000397938 ZBTB7BO15156 539 aaPredicted RBP21.57■■□□□ 1.04
EWSR1-206ENST00000397938 GAS2L2Q8NHY3 880 aa21.57■■□□□ 1.04
EWSR1-206ENST00000397938 ARHGAP31Q2M1Z3 1444 aa21.57■■□□□ 1.04
EWSR1-206ENST00000397938 HECW2Q9P2P5 1572 aa21.56■■□□□ 1.04
EWSR1-206ENST00000397938 NASPP49321 788 aaPredicted RBP21.56■■□□□ 1.04
EWSR1-206ENST00000397938 KLHL40Q2TBA0 621 aa21.56■■□□□ 1.04
EWSR1-206ENST00000397938 RBM42Q9BTD8 480 aaKnown RBP21.56■■□□□ 1.04
EWSR1-206ENST00000397938 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
EWSR1-206ENST00000397938 VSIG10Q8N0Z9 540 aa21.55■■□□□ 1.04
EWSR1-206ENST00000397938 PKNOX2Q96KN3 472 aa21.55■■□□□ 1.04
EWSR1-206ENST00000397938 CHMP4BQ9H444 224 aaKnown RBP21.55■■□□□ 1.04
EWSR1-206ENST00000397938 NEXMIFQ5QGS0 1516 aa21.55■■□□□ 1.04
EWSR1-206ENST00000397938 CDC42BPGQ6DT37 1551 aa21.55■■□□□ 1.04
EWSR1-206ENST00000397938 LRRC7Q96NW7 1537 aa21.54■■□□□ 1.04
EWSR1-206ENST00000397938 PNPLA6Q8IY17 1366 aa21.54■■□□□ 1.04
EWSR1-206ENST00000397938 PIK3C2BO00750 1634 aa21.54■■□□□ 1.04
EWSR1-206ENST00000397938 DIAPH1O60610 1272 aaKnown RBP21.54■■□□□ 1.04
EWSR1-206ENST00000397938 BAG4O95429 457 aaKnown RBP21.53■■□□□ 1.04
EWSR1-206ENST00000397938 ZSCAN30Q86W11 494 aa21.53■■□□□ 1.04
EWSR1-206ENST00000397938 FYB1O15117 783 aa21.52■■□□□ 1.04
EWSR1-206ENST00000397938 C1orf115Q9H7X2 142 aa21.52■■□□□ 1.04
EWSR1-206ENST00000397938 CDC45O75419 566 aa21.52■■□□□ 1.04
EWSR1-206ENST00000397938 DDX49Q9Y6V7 483 aaKnown RBP21.52■■□□□ 1.04
EWSR1-206ENST00000397938 FRMPD1Q5SYB0 1578 aa21.52■■□□□ 1.04
EWSR1-206ENST00000397938 ARHGAP45Q92619 1136 aa21.52■■□□□ 1.03
EWSR1-206ENST00000397938 CD163L1Q9NR16 1453 aa21.51■■□□□ 1.03
EWSR1-206ENST00000397938 MRPL50Q8N5N7 158 aaKnown RBP21.51■■□□□ 1.03
EWSR1-206ENST00000397938 ANP32BQ92688 251 aaKnown RBP21.51■■□□□ 1.03
EWSR1-206ENST00000397938 ABCC3O15438 1527 aa21.5■■□□□ 1.03
EWSR1-206ENST00000397938 FAM135BQ49AJ0 1406 aa21.5■■□□□ 1.03
EWSR1-206ENST00000397938 VGFO15240 615 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms