RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 HSP90B1P14625 803 aaKnown RBP19.03■□□□□ 0.64
LSS-202ENST00000397728 NEUROD6Q96NK8 337 aa19.03■□□□□ 0.64
LSS-202ENST00000397728 BTBD11A6QL63 1104 aa19.03■□□□□ 0.64
LSS-202ENST00000397728 KCNA6P17658 529 aa19.03■□□□□ 0.64
LSS-202ENST00000397728 GLIPR1L2Q4G1C9 344 aa19.03■□□□□ 0.64
LSS-202ENST00000397728 C11orf95C9JLR9 678 aaPredicted RBP19.03■□□□□ 0.64
LSS-202ENST00000397728 SLC4A2P04920 1241 aa19.03■□□□□ 0.64
LSS-202ENST00000397728 PANK1Q8TE04 598 aa19.03■□□□□ 0.64
LSS-202ENST00000397728 C19orf44Q9H6X5 657 aa19.02■□□□□ 0.64
LSS-202ENST00000397728 NPHP3Q7Z494 1330 aa19.02■□□□□ 0.64
LSS-202ENST00000397728 NOL8Q76FK4 1167 aaKnown RBP19.02■□□□□ 0.64
LSS-202ENST00000397728 ANP32EQ9BTT0 268 aa19.02■□□□□ 0.63
LSS-202ENST00000397728 DCAF8L1A6NGE4 600 aa19.01■□□□□ 0.63
LSS-202ENST00000397728 DIAPH3Q9NSV4 1193 aa19■□□□□ 0.63
LSS-202ENST00000397728 LRRFIP1Q32MZ4 808 aaKnown RBP19■□□□□ 0.63
LSS-202ENST00000397728 GNAT3A8MTJ3 354 aa19■□□□□ 0.63
LSS-202ENST00000397728 CENPQQ7L2Z9 268 aaPredicted RBP18.99■□□□□ 0.63
LSS-202ENST00000397728 UHRF1BP1Q6BDS2 1440 aa18.99■□□□□ 0.63
LSS-202ENST00000397728 EXOC5O00471 708 aa18.99■□□□□ 0.63
LSS-202ENST00000397728 MPRIPQ6WCQ1 1025 aa18.99■□□□□ 0.63
LSS-202ENST00000397728 TMOD3Q9NYL9 352 aa18.98■□□□□ 0.63
LSS-202ENST00000397728 APPP05067 770 aa18.98■□□□□ 0.63
LSS-202ENST00000397728 HSP90AB4PQ58FF6 505 aa18.98■□□□□ 0.63
LSS-202ENST00000397728 THUMPD2Q9BTF0 503 aaKnown RBP18.98■□□□□ 0.63
LSS-202ENST00000397728 NFE2L2Q16236 605 aa18.98■□□□□ 0.63
LSS-202ENST00000397728 MCM10Q7L590 875 aa18.97■□□□□ 0.63
LSS-202ENST00000397728 MIS18AQ9NYP9 233 aa18.97■□□□□ 0.63
LSS-202ENST00000397728 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
LSS-202ENST00000397728 GNAI3P08754 354 aa18.97■□□□□ 0.63
LSS-202ENST00000397728 TRIM34Q9BYJ4 488 aa18.97■□□□□ 0.63
LSS-202ENST00000397728 LMTK3Q96Q04 1460 aa18.96■□□□□ 0.63
LSS-202ENST00000397728 TCOF1Q13428 1488 aaKnown RBP18.96■□□□□ 0.63
LSS-202ENST00000397728 TBX22Q9Y458 520 aa18.96■□□□□ 0.63
LSS-202ENST00000397728 DCTN1Q14203 1278 aa18.96■□□□□ 0.63
LSS-202ENST00000397728 NEO1Q92859 1461 aa18.95■□□□□ 0.62
LSS-202ENST00000397728 RAD21O60216 631 aa18.95■□□□□ 0.62
LSS-202ENST00000397728 FBLN1P23142 703 aa18.95■□□□□ 0.62
LSS-202ENST00000397728 TMPOP42166 694 aaKnown RBP18.95■□□□□ 0.62
LSS-202ENST00000397728 ATP7AQ04656 1500 aa18.95■□□□□ 0.62
LSS-202ENST00000397728 AMOTQ4VCS5 1084 aa18.95■□□□□ 0.62
LSS-202ENST00000397728 BICDL1Q6ZP65 573 aa18.95■□□□□ 0.62
LSS-202ENST00000397728 AMOTL1Q8IY63 956 aa18.95■□□□□ 0.62
LSS-202ENST00000397728 CABLES1Q8TDN4 633 aa18.95■□□□□ 0.62
LSS-202ENST00000397728 C8orf37Q96NL8 207 aa18.95■□□□□ 0.62
LSS-202ENST00000397728 CCDC184Q52MB2 194 aa18.94■□□□□ 0.62
LSS-202ENST00000397728 SURF6O75683 361 aaKnown RBP18.93■□□□□ 0.62
LSS-202ENST00000397728 STARD3NLO95772 234 aa18.93■□□□□ 0.62
LSS-202ENST00000397728 SHANK2Q9UPX8 1470 aa18.93■□□□□ 0.62
LSS-202ENST00000397728 LNPKQ9C0E8 428 aa18.93■□□□□ 0.62
LSS-202ENST00000397728 ANKRD24Q8TF21 1146 aa18.92■□□□□ 0.62
LSS-202ENST00000397728 WDR63Q8IWG1 891 aa18.92■□□□□ 0.62
LSS-202ENST00000397728 DISP3Q9P2K9 1392 aa18.92■□□□□ 0.62
LSS-202ENST00000397728 TTC21BQ7Z4L5 1316 aa18.91■□□□□ 0.62
LSS-202ENST00000397728 DNAJC5Q9H3Z4 198 aa18.91■□□□□ 0.62
LSS-202ENST00000397728 RUFY2Q8WXA3 655 aa18.91■□□□□ 0.62
LSS-202ENST00000397728 SLKQ9H2G2 1235 aaPredicted RBP18.91■□□□□ 0.62
LSS-202ENST00000397728 CLSTN1O94985 981 aa18.9■□□□□ 0.62
LSS-202ENST00000397728 YEATS2Q9ULM3 1422 aa18.9■□□□□ 0.62
LSS-202ENST00000397728 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
LSS-202ENST00000397728 NOB1Q9ULX3 412 aaKnown RBP18.9■□□□□ 0.62
LSS-202ENST00000397728 CNNM1Q9NRU3 951 aa18.89■□□□□ 0.62
LSS-202ENST00000397728 NOP58Q9Y2X3 529 aaKnown RBP18.89■□□□□ 0.62
LSS-202ENST00000397728 PTMAP06454 111 aaKnown RBP18.89■□□□□ 0.61
LSS-202ENST00000397728 CCDC27Q2M243 656 aa18.89■□□□□ 0.61
LSS-202ENST00000397728 CLASRPQ8N2M8 674 aaKnown RBP18.89■□□□□ 0.61
LSS-202ENST00000397728 SAMD9Q5K651 1589 aa18.88■□□□□ 0.61
LSS-202ENST00000397728 ERC2O15083 957 aa18.88■□□□□ 0.61
LSS-202ENST00000397728 C1orf115Q9H7X2 142 aa18.88■□□□□ 0.61
LSS-202ENST00000397728 PPIP5K1Q6PFW1 1433 aa18.87■□□□□ 0.61
LSS-202ENST00000397728 BCAR3O75815 825 aa18.87■□□□□ 0.61
LSS-202ENST00000397728 CHD1O14646 1710 aa18.87■□□□□ 0.61
LSS-202ENST00000397728 HSP90AB2PQ58FF8 381 aa18.87■□□□□ 0.61
LSS-202ENST00000397728 WASHC4Q2M389 1173 aa18.87■□□□□ 0.61
LSS-202ENST00000397728 NINLQ9Y2I6 1382 aa18.87■□□□□ 0.61
LSS-202ENST00000397728 TTC21AQ8NDW8 1320 aa18.87■□□□□ 0.61
LSS-202ENST00000397728 CFAP43Q8NDM7 1665 aa18.86■□□□□ 0.61
LSS-202ENST00000397728 TAF7Q15545 349 aaPredicted RBP18.86■□□□□ 0.61
LSS-202ENST00000397728 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
LSS-202ENST00000397728 FOXD4L1Q9NU39 408 aa18.86■□□□□ 0.61
LSS-202ENST00000397728 ZFYVE16Q7Z3T8 1539 aa18.86■□□□□ 0.61
LSS-202ENST00000397728 WWC1Q8IX03 1113 aa18.86■□□□□ 0.61
LSS-202ENST00000397728 ST18O60284 1047 aa18.85■□□□□ 0.61
LSS-202ENST00000397728 FYB1O15117 783 aa18.85■□□□□ 0.61
LSS-202ENST00000397728 GNAI2P04899 355 aa18.85■□□□□ 0.61
LSS-202ENST00000397728 TRIM44Q96DX7 344 aaPredicted RBP18.85■□□□□ 0.61
LSS-202ENST00000397728 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
LSS-202ENST00000397728 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
LSS-202ENST00000397728 VPS53Q5VIR6 699 aa18.85■□□□□ 0.61
LSS-202ENST00000397728 DUSP27Q5VZP5 1158 aa18.84■□□□□ 0.61
LSS-202ENST00000397728 MPHOSPH8Q99549 860 aa18.84■□□□□ 0.61
LSS-202ENST00000397728 ZKSCAN1P17029 563 aaPredicted RBP18.84■□□□□ 0.61
LSS-202ENST00000397728 CCDC85AQ96PX6 553 aaPredicted RBP18.84■□□□□ 0.61
LSS-202ENST00000397728 ANO2Q9NQ90 1003 aa18.84■□□□□ 0.61
LSS-202ENST00000397728 SIL1Q9H173 461 aa18.84■□□□□ 0.61
LSS-202ENST00000397728 ZPR1O75312 459 aa18.83■□□□□ 0.61
LSS-202ENST00000397728 CCT4P50991 539 aaKnown RBP18.83■□□□□ 0.61
LSS-202ENST00000397728 ZRANB1Q9UGI0 708 aa18.83■□□□□ 0.61
LSS-202ENST00000397728 PRAG1Q86YV5 1406 aa18.83■□□□□ 0.61
LSS-202ENST00000397728 SYNE3Q6ZMZ3 975 aa18.83■□□□□ 0.61
LSS-202ENST00000397728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.83■□□□□ 0.67e-7■■□□□ 13.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms