RNA–Protein interactions for RNA: ENST00000397349.6

SMIM7-202, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,122 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-202ENST00000397349 CABP2Q9NPB3 220 aa11.87□□□□□ -0.51
SMIM7-202ENST00000397349 ZRANB1Q9UGI0 708 aa11.87□□□□□ -0.51
SMIM7-202ENST00000397349 LRRC7Q96NW7 1537 aa11.86□□□□□ -0.51
SMIM7-202ENST00000397349 WASLO00401 505 aaPredicted RBP11.85□□□□□ -0.51
SMIM7-202ENST00000397349 ATP7BP35670 1465 aa11.84□□□□□ -0.51
SMIM7-202ENST00000397349 TMEM94Q12767 1356 aa11.84□□□□□ -0.51
SMIM7-202ENST00000397349 ATAD2Q6PL18 1390 aa11.84□□□□□ -0.51
SMIM7-202ENST00000397349 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
SMIM7-202ENST00000397349 LTBP4Q8N2S1 1624 aa11.84□□□□□ -0.51
SMIM7-202ENST00000397349 KIF1AQ12756 1690 aa11.84□□□□□ -0.51
SMIM7-202ENST00000397349 DIEXFQ68CQ4 756 aaKnown RBP11.83□□□□□ -0.52
SMIM7-202ENST00000397349 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
SMIM7-202ENST00000397349 NUTM2FA1L443 756 aa11.82□□□□□ -0.52
SMIM7-202ENST00000397349 PUS7Q96PZ0 661 aaKnown RBP11.82□□□□□ -0.52
SMIM7-202ENST00000397349 NCOA3Q9Y6Q9 1424 aa11.82□□□□□ -0.52
SMIM7-202ENST00000397349 NRKQ7Z2Y5 1582 aa11.81□□□□□ -0.52
SMIM7-202ENST00000397349 PPIP5K1Q6PFW1 1433 aa11.81□□□□□ -0.52
SMIM7-202ENST00000397349 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
SMIM7-202ENST00000397349 PRR36Q9H6K5 1346 aa11.81□□□□□ -0.52
SMIM7-202ENST00000397349 MSH6P52701 1360 aa11.8□□□□□ -0.52
SMIM7-202ENST00000397349 NINLQ9Y2I6 1382 aa11.8□□□□□ -0.52
SMIM7-202ENST00000397349 ANKARQ7Z5J8 1434 aa11.8□□□□□ -0.52
SMIM7-202ENST00000397349 SLC12A5Q9H2X9 1139 aa11.8□□□□□ -0.52
SMIM7-202ENST00000397349 MAP2P11137 1827 aaKnown RBP11.79□□□□□ -0.52
SMIM7-202ENST00000397349 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
SMIM7-202ENST00000397349 PANK3Q9H999 370 aa11.79□□□□□ -0.52
SMIM7-202ENST00000397349 DCCP43146 1447 aa11.78□□□□□ -0.52
SMIM7-202ENST00000397349 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
SMIM7-202ENST00000397349 CD163L1Q9NR16 1453 aa11.77□□□□□ -0.52
SMIM7-202ENST00000397349 ATF3P18847 181 aa11.77□□□□□ -0.53
SMIM7-202ENST00000397349 C19orf44Q9H6X5 657 aa11.77□□□□□ -0.53
SMIM7-202ENST00000397349 CABP1Q9NZU7 370 aa11.77□□□□□ -0.53
SMIM7-202ENST00000397349 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
SMIM7-202ENST00000397349 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.53
SMIM7-202ENST00000397349 ANKRD36BQ8N2N9 1353 aa11.77□□□□□ -0.53
SMIM7-202ENST00000397349 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.53
SMIM7-202ENST00000397349 HDGFL2Q7Z4V5 671 aaPredicted RBP11.76□□□□□ -0.53
SMIM7-202ENST00000397349 TRPM3Q9HCF6 1732 aaPredicted RBP11.76□□□□□ -0.53
SMIM7-202ENST00000397349 A0A1W2PP64 1363 aa11.76□□□□□ -0.53
SMIM7-202ENST00000397349 MST1RQ04912 1400 aa11.76□□□□□ -0.53
SMIM7-202ENST00000397349 C1orf167Q5SNV9 1468 aa11.76□□□□□ -0.53
SMIM7-202ENST00000397349 NHSL1Q5SYE7 1610 aa11.75□□□□□ -0.53
SMIM7-202ENST00000397349 MARF1Q9Y4F3 1742 aaKnown RBP11.75□□□□□ -0.53
SMIM7-202ENST00000397349 CNGB1Q14028 1251 aaPredicted RBP11.75□□□□□ -0.53
SMIM7-202ENST00000397349 TERF2IPQ9NYB0 399 aa11.75□□□□□ -0.53
SMIM7-202ENST00000397349 ROBO1Q9Y6N7 1651 aa11.75□□□□□ -0.53
SMIM7-202ENST00000397349 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
SMIM7-202ENST00000397349 PMFBP1Q8TBY8 1022 aa11.74□□□□□ -0.53
SMIM7-202ENST00000397349 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
SMIM7-202ENST00000397349 KTN1Q86UP2 1357 aaKnown RBP11.74□□□□□ -0.53
SMIM7-202ENST00000397349 PIK3C2AO00443 1686 aa11.74□□□□□ -0.53
SMIM7-202ENST00000397349 ACEP12821 1306 aa11.73□□□□□ -0.53
SMIM7-202ENST00000397349 ESCO1Q5FWF5 840 aa11.73□□□□□ -0.53
SMIM7-202ENST00000397349 USP54Q70EL1 1684 aa11.73□□□□□ -0.53
SMIM7-202ENST00000397349 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
SMIM7-202ENST00000397349 KNSTRNQ9Y448 316 aa11.73□□□□□ -0.53
SMIM7-202ENST00000397349 ALS2Q96Q42 1657 aa11.72□□□□□ -0.53
SMIM7-202ENST00000397349 CPSF1Q10570 1443 aaKnown RBP11.72□□□□□ -0.53
SMIM7-202ENST00000397349 PLEKHG3A1L390 1219 aa11.72□□□□□ -0.53
SMIM7-202ENST00000397349 ANP32CO43423 234 aa11.72□□□□□ -0.53
SMIM7-202ENST00000397349 NGDNQ8NEJ9 315 aaKnown RBP11.72□□□□□ -0.53
SMIM7-202ENST00000397349 PHF12Q96QT6 1004 aa11.72□□□□□ -0.53
SMIM7-202ENST00000397349 CARD14Q9BXL6 1004 aa11.72□□□□□ -0.53
SMIM7-202ENST00000397349 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
SMIM7-202ENST00000397349 LTN1O94822 1766 aa11.72□□□□□ -0.53
SMIM7-202ENST00000397349 EDC4Q6P2E9 1401 aaKnown RBP11.71□□□□□ -0.53
SMIM7-202ENST00000397349 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
SMIM7-202ENST00000397349 PHLPP1O60346 1717 aa11.71□□□□□ -0.54
SMIM7-202ENST00000397349 USP6P35125 1406 aa11.7□□□□□ -0.54
SMIM7-202ENST00000397349 POLR3AO14802 1390 aaPredicted RBP11.7□□□□□ -0.54
SMIM7-202ENST00000397349 PER1O15534 1290 aaPredicted RBP11.7□□□□□ -0.54
SMIM7-202ENST00000397349 CC2D1BQ5T0F9 858 aaKnown RBP11.7□□□□□ -0.54
SMIM7-202ENST00000397349 ORAI2Q96SN7 254 aa11.7□□□□□ -0.54
SMIM7-202ENST00000397349 IQSEC2Q5JU85 1478 aa11.69□□□□□ -0.54
SMIM7-202ENST00000397349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMIM7-202ENST00000397349 RGPD5Q99666 1765 aa11.68□□□□□ -0.54
SMIM7-202ENST00000397349 CRYBG1Q9Y4K1 1723 aa11.68□□□□□ -0.54
SMIM7-202ENST00000397349 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
SMIM7-202ENST00000397349 CGNL1Q0VF96 1302 aa11.67□□□□□ -0.54
SMIM7-202ENST00000397349 ABCA3Q99758 1704 aa11.67□□□□□ -0.54
SMIM7-202ENST00000397349 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
SMIM7-202ENST00000397349 SLAIN2Q9P270 581 aa11.67□□□□□ -0.54
SMIM7-202ENST00000397349 NSD2O96028 1365 aa11.67□□□□□ -0.54
SMIM7-202ENST00000397349 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
SMIM7-202ENST00000397349 TTC21BQ7Z4L5 1316 aa11.66□□□□□ -0.54
SMIM7-202ENST00000397349 NUBP1P53384 320 aa11.66□□□□□ -0.54
SMIM7-202ENST00000397349 PSME1Q06323 249 aa11.66□□□□□ -0.54
SMIM7-202ENST00000397349 PRKRIP1Q9H875 184 aaPredicted RBP11.66□□□□□ -0.54
SMIM7-202ENST00000397349 PARD3Q8TEW0 1356 aa11.66□□□□□ -0.54
SMIM7-202ENST00000397349 FOXO3O43524 673 aa11.65□□□□□ -0.54
SMIM7-202ENST00000397349 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
SMIM7-202ENST00000397349 GGNBP2Q9H3C7 697 aa11.65□□□□□ -0.54
SMIM7-202ENST00000397349 SSH2Q76I76 1423 aa11.65□□□□□ -0.54
SMIM7-202ENST00000397349 AHDC1Q5TGY3 1603 aaPredicted RBP11.64□□□□□ -0.55
SMIM7-202ENST00000397349 PXDNQ92626 1479 aa11.64□□□□□ -0.55
SMIM7-202ENST00000397349 TTC21AQ8NDW8 1320 aa11.64□□□□□ -0.55
SMIM7-202ENST00000397349 XPCQ01831 940 aaPredicted RBP11.64□□□□□ -0.55
SMIM7-202ENST00000397349 RALBP1Q15311 655 aa11.64□□□□□ -0.55
SMIM7-202ENST00000397349 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
SMIM7-202ENST00000397349 KRT28Q7Z3Y7 464 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms