RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 KIAA1210Q9ULL0 1709 aa11.47□□□□□ -0.57
CAPN3-206ENST00000397163 MYOM2P54296 1465 aa11.47□□□□□ -0.57
CAPN3-206ENST00000397163 INO80Q9ULG1 1556 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-206ENST00000397163 SMC5Q8IY18 1101 aa11.47□□□□□ -0.57
CAPN3-206ENST00000397163 GBP4Q96PP9 640 aa11.47□□□□□ -0.57
CAPN3-206ENST00000397163 ISY1Q9ULR0 285 aaKnown RBP11.47□□□□□ -0.57
CAPN3-206ENST00000397163 NOB1Q9ULX3 412 aaKnown RBP11.47□□□□□ -0.57
CAPN3-206ENST00000397163 ZNF518AQ6AHZ1 1483 aa11.47□□□□□ -0.57
CAPN3-206ENST00000397163 ABCA6Q8N139 1617 aa11.47□□□□□ -0.57
CAPN3-206ENST00000397163 TMEM132EQ6IEE7 984 aa11.47□□□□□ -0.57
CAPN3-206ENST00000397163 TNPO1Q92973 898 aaKnown RBP11.47□□□□□ -0.57
CAPN3-206ENST00000397163 LNPKQ9C0E8 428 aa11.47□□□□□ -0.57
CAPN3-206ENST00000397163 SHPRHQ149N8 1683 aa11.46□□□□□ -0.57
CAPN3-206ENST00000397163 GAS2L3Q86XJ1 694 aa11.46□□□□□ -0.57
CAPN3-206ENST00000397163 TMEM57Q8N5G2 664 aa11.46□□□□□ -0.57
CAPN3-206ENST00000397163 ZBTB7CA1YPR0 619 aa11.46□□□□□ -0.58
CAPN3-206ENST00000397163 RICTORQ6R327 1708 aa11.45□□□□□ -0.58
CAPN3-206ENST00000397163 TPM2P07951 284 aa11.45□□□□□ -0.58
CAPN3-206ENST00000397163 FOXD4L1Q9NU39 408 aa11.45□□□□□ -0.58
CAPN3-206ENST00000397163 TET3O43151 1660 aa11.45□□□□□ -0.58
CAPN3-206ENST00000397163 SNX21Q969T3 373 aa11.45□□□□□ -0.58
CAPN3-206ENST00000397163 NOS1P29475 1434 aa11.45□□□□□ -0.58
CAPN3-206ENST00000397163 RBM25P49756 843 aaKnown RBP11.45□□□□□ -0.58
CAPN3-206ENST00000397163 CALD1Q05682 793 aaKnown RBP11.45□□□□□ -0.58
CAPN3-206ENST00000397163 NCBP3Q53F19 620 aaKnown RBP11.45□□□□□ -0.58
CAPN3-206ENST00000397163 ZFYVE16Q7Z3T8 1539 aa11.44□□□□□ -0.58
CAPN3-206ENST00000397163 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
CAPN3-206ENST00000397163 TMPOP42166 694 aaKnown RBP11.44□□□□□ -0.58
CAPN3-206ENST00000397163 IPO8O15397 1037 aaKnown RBP11.43□□□□□ -0.58
CAPN3-206ENST00000397163 ZBTB40Q9NUA8 1239 aa11.43□□□□□ -0.58
CAPN3-206ENST00000397163 RAPGEF3O95398 923 aa11.43□□□□□ -0.58
CAPN3-206ENST00000397163 DDIT3P35638 169 aa11.43□□□□□ -0.58
CAPN3-206ENST00000397163 NUCB1Q02818 461 aa11.43□□□□□ -0.58
CAPN3-206ENST00000397163 SKOR2Q2VWA4 1001 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-206ENST00000397163 R3HCC1Q9Y3T6 440 aaKnown RBP11.43□□□□□ -0.58
CAPN3-206ENST00000397163 FRMPD1Q5SYB0 1578 aa11.43□□□□□ -0.58
CAPN3-206ENST00000397163 RIPK4P57078 832 aa11.43□□□□□ -0.58
CAPN3-206ENST00000397163 CHD1LQ86WJ1 897 aa11.43□□□□□ -0.58
CAPN3-206ENST00000397163 C14orf93Q9H972 538 aaKnown RBP11.42□□□□□ -0.58
CAPN3-206ENST00000397163 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
CAPN3-206ENST00000397163 NCOA3Q9Y6Q9 1424 aa11.42□□□□□ -0.58
CAPN3-206ENST00000397163 RAB3GAP1Q15042 981 aa11.42□□□□□ -0.58
CAPN3-206ENST00000397163 TRIM35Q9UPQ4 493 aa11.42□□□□□ -0.58
CAPN3-206ENST00000397163 KIF16BQ96L93 1317 aa11.41□□□□□ -0.58
CAPN3-206ENST00000397163 MLH3Q9UHC1 1453 aa11.41□□□□□ -0.58
CAPN3-206ENST00000397163 PTMSP20962 102 aa11.41□□□□□ -0.58
CAPN3-206ENST00000397163 EVC2Q86UK5 1308 aa11.41□□□□□ -0.58
CAPN3-206ENST00000397163 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
CAPN3-206ENST00000397163 ANKRD45Q5TZF3 282 aa11.41□□□□□ -0.58
CAPN3-206ENST00000397163 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
CAPN3-206ENST00000397163 NEURL4Q96JN8 1562 aa11.4□□□□□ -0.58
CAPN3-206ENST00000397163 DEPDC5O75140 1603 aa11.4□□□□□ -0.58
CAPN3-206ENST00000397163 GOLGA6L22H0YM25 854 aa11.4□□□□□ -0.58
CAPN3-206ENST00000397163 SAFB2Q14151 953 aaKnown RBP eCLIP11.4□□□□□ -0.58
CAPN3-206ENST00000397163 GGNBP2Q9H3C7 697 aa11.4□□□□□ -0.58
CAPN3-206ENST00000397163 BMP2KLQ5H9B9 411 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 PLEKHF1Q96S99 279 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 NSD2O96028 1365 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 HECW2Q9P2P5 1572 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 KIDINS220Q9ULH0 1771 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 MYO3AQ8NEV4 1616 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 VWDEQ8N2E2 1590 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 ATP7AQ04656 1500 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 NRXN1Q9ULB1 1477 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 ANKRD36BQ8N2N9 1353 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 K7ELQ4 463 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-206ENST00000397163 FGD1P98174 961 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 ANP32BQ92688 251 aaKnown RBP11.39□□□□□ -0.59
CAPN3-206ENST00000397163 ABCC11Q96J66 1382 aa11.39□□□□□ -0.59
CAPN3-206ENST00000397163 CD2BP2O95400 341 aaKnown RBP11.39□□□□□ -0.59
CAPN3-206ENST00000397163 NUTM2DQ5VT03 806 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-206ENST00000397163 IL16Q14005 1332 aa11.38□□□□□ -0.59
CAPN3-206ENST00000397163 MSNP26038 577 aaKnown RBP11.38□□□□□ -0.59
CAPN3-206ENST00000397163 SSFA2P28290 1259 aa11.38□□□□□ -0.59
CAPN3-206ENST00000397163 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
CAPN3-206ENST00000397163 NASPP49321 788 aaPredicted RBP11.37□□□□□ -0.59
CAPN3-206ENST00000397163 KIF2CQ99661 725 aa11.37□□□□□ -0.59
CAPN3-206ENST00000397163 C1orf115Q9H7X2 142 aa11.37□□□□□ -0.59
CAPN3-206ENST00000397163 KIF1BO60333 1816 aa11.37□□□□□ -0.59
CAPN3-206ENST00000397163 XPCQ01831 940 aaPredicted RBP11.37□□□□□ -0.59
CAPN3-206ENST00000397163 DDX49Q9Y6V7 483 aaKnown RBP11.37□□□□□ -0.59
CAPN3-206ENST00000397163 CCDC173Q0VFZ6 552 aa11.37□□□□□ -0.59
CAPN3-206ENST00000397163 TBC1D9Q6ZT07 1266 aa11.37□□□□□ -0.59
CAPN3-206ENST00000397163 SRPK2P78362 688 aaKnown RBP11.36□□□□□ -0.59
CAPN3-206ENST00000397163 ADGRB2O60241 1585 aa11.36□□□□□ -0.59
CAPN3-206ENST00000397163 SETBP1Q9Y6X0 1596 aa11.36□□□□□ -0.59
CAPN3-206ENST00000397163 ALDH1L2Q3SY69 923 aa11.36□□□□□ -0.59
CAPN3-206ENST00000397163 GAS2L2Q8NHY3 880 aa11.36□□□□□ -0.59
CAPN3-206ENST00000397163 GCC1Q96CN9 775 aa11.36□□□□□ -0.59
CAPN3-206ENST00000397163 SENP3Q9H4L4 574 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-206ENST00000397163 UQCRHLA0A096LP55 91 aa11.35□□□□□ -0.59
CAPN3-206ENST00000397163 UQCRHP07919 91 aa11.35□□□□□ -0.59
CAPN3-206ENST00000397163 QRICH2Q9H0J4 1663 aa11.35□□□□□ -0.59
CAPN3-206ENST00000397163 EFCAB6Q5THR3 1501 aa11.35□□□□□ -0.59
CAPN3-206ENST00000397163 PUS7Q96PZ0 661 aaKnown RBP11.35□□□□□ -0.59
CAPN3-206ENST00000397163 MROH2AA6NES4 1674 aa11.35□□□□□ -0.59
CAPN3-206ENST00000397163 DIAPH1O60610 1272 aaKnown RBP11.35□□□□□ -0.59
CAPN3-206ENST00000397163 NCLP19338 710 aaKnown RBP11.35□□□□□ -0.59
CAPN3-206ENST00000397163 GGT6Q6P531 493 aa11.35□□□□□ -0.59
CAPN3-206ENST00000397163 CHMP4BQ9H444 224 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms