RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CCDC27Q2M243 656 aa30.1■■■□□ 2.41
CSNK1E-203ENST00000396832 ASXL2Q76L83 1435 aa30.1■■■□□ 2.41
CSNK1E-203ENST00000396832 FOXD4L1Q9NU39 408 aa30.09■■■□□ 2.41
CSNK1E-203ENST00000396832 NRXN1Q9ULB1 1477 aa30.09■■■□□ 2.41
CSNK1E-203ENST00000396832 TMPOP42166 694 aaKnown RBP30.09■■■□□ 2.41
CSNK1E-203ENST00000396832 GAS2L3Q86XJ1 694 aa30.09■■■□□ 2.41
CSNK1E-203ENST00000396832 FBLN1P23142 703 aa30.08■■■□□ 2.41
CSNK1E-203ENST00000396832 CYB5RLQ6IPT4 315 aa30.08■■■□□ 2.41
CSNK1E-203ENST00000396832 TRIM35Q9UPQ4 493 aa30.08■■■□□ 2.41
CSNK1E-203ENST00000396832 CD109Q6YHK3 1445 aa30.08■■■□□ 2.41
CSNK1E-203ENST00000396832 EVC2Q86UK5 1308 aa30.08■■■□□ 2.41
CSNK1E-203ENST00000396832 NPATQ14207 1427 aa30.07■■■□□ 2.4
CSNK1E-203ENST00000396832 ATF7IPQ6VMQ6 1270 aa30.07■■■□□ 2.4
CSNK1E-203ENST00000396832 ADGRB3O60242 1522 aa30.06■■■□□ 2.4
CSNK1E-203ENST00000396832 DDIT3P35638 169 aa30.05■■■□□ 2.4
CSNK1E-203ENST00000396832 C1orf115Q9H7X2 142 aa30.05■■■□□ 2.4
CSNK1E-203ENST00000396832 ZC3H13Q5T200 1668 aaKnown RBP30.05■■■□□ 2.4
CSNK1E-203ENST00000396832 ADGRB1O14514 1584 aa30.05■■■□□ 2.4
CSNK1E-203ENST00000396832 RIPK4P57078 832 aa30.05■■■□□ 2.4
CSNK1E-203ENST00000396832 TNPO1Q92973 898 aaKnown RBP30.04■■■□□ 2.4
CSNK1E-203ENST00000396832 ABCA9Q8IUA7 1624 aa30.04■■■□□ 2.4
CSNK1E-203ENST00000396832 DDX19BQ9UMR2 479 aa30.03■■■□□ 2.4
CSNK1E-203ENST00000396832 MINK1Q8N4C8 1332 aaPredicted RBP30.02■■■□□ 2.4
CSNK1E-203ENST00000396832 A0A1W2PP64 1363 aa30.02■■■□□ 2.4
CSNK1E-203ENST00000396832 ANKRD36BQ8N2N9 1353 aa30.02■■■□□ 2.4
CSNK1E-203ENST00000396832 TULP4Q9NRJ4 1543 aa30.02■■■□□ 2.4
CSNK1E-203ENST00000396832 KIDINS220Q9ULH0 1771 aa30.01■■■□□ 2.4
CSNK1E-203ENST00000396832 TPM2P07951 284 aa30.01■■■□□ 2.39
CSNK1E-203ENST00000396832 PLEKHF1Q96S99 279 aa30.01■■■□□ 2.39
CSNK1E-203ENST00000396832 NCOA3Q9Y6Q9 1424 aa30.01■■■□□ 2.39
CSNK1E-203ENST00000396832 PPLO60437 1756 aa29.99■■■□□ 2.39
CSNK1E-203ENST00000396832 SETBP1Q9Y6X0 1596 aa29.99■■■□□ 2.39
CSNK1E-203ENST00000396832 GBP4Q96PP9 640 aa29.98■■■□□ 2.39
CSNK1E-203ENST00000396832 THUMPD2Q9BTF0 503 aaKnown RBP29.98■■■□□ 2.39
CSNK1E-203ENST00000396832 ARAP3Q8WWN8 1544 aa29.98■■■□□ 2.39
CSNK1E-203ENST00000396832 ELL2O00472 640 aaPredicted RBP29.98■■■□□ 2.39
CSNK1E-203ENST00000396832 NEURL4Q96JN8 1562 aa29.98■■■□□ 2.39
CSNK1E-203ENST00000396832 HDAC1Q13547 482 aaPredicted RBP29.98■■■□□ 2.39
CSNK1E-203ENST00000396832 GLI2P10070 1586 aa29.97■■■□□ 2.39
CSNK1E-203ENST00000396832 SNX21Q969T3 373 aa29.97■■■□□ 2.39
CSNK1E-203ENST00000396832 SMC5Q8IY18 1101 aa29.96■■■□□ 2.39
CSNK1E-203ENST00000396832 SKOR2Q2VWA4 1001 aaPredicted RBP29.96■■■□□ 2.39
CSNK1E-203ENST00000396832 ZBTB40Q9NUA8 1239 aa29.95■■■□□ 2.38
CSNK1E-203ENST00000396832 HSP90AB1P08238 724 aaKnown RBP29.94■■■□□ 2.38
CSNK1E-203ENST00000396832 RBM25P49756 843 aaKnown RBP29.94■■■□□ 2.38
CSNK1E-203ENST00000396832 CIZ1Q9ULV3 898 aaPredicted RBP29.94■■■□□ 2.38
CSNK1E-203ENST00000396832 RAB3GAP1Q15042 981 aa29.93■■■□□ 2.38
CSNK1E-203ENST00000396832 PDCL3Q9H2J4 239 aa29.93■■■□□ 2.38
CSNK1E-203ENST00000396832 ADGRB2O60241 1585 aa29.93■■■□□ 2.38
CSNK1E-203ENST00000396832 KIAA1211Q6ZU35 1233 aa29.92■■■□□ 2.38
CSNK1E-203ENST00000396832 ANKRD45Q5TZF3 282 aa29.92■■■□□ 2.38
CSNK1E-203ENST00000396832 FYB1O15117 783 aa29.91■■■□□ 2.38
CSNK1E-203ENST00000396832 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.91■■■□□ 2.38
CSNK1E-203ENST00000396832 CD2BP2O95400 341 aaKnown RBP29.91■■■□□ 2.38
CSNK1E-203ENST00000396832 HMOX1P09601 288 aa29.9■■■□□ 2.38
CSNK1E-203ENST00000396832 RBM42Q9BTD8 480 aaKnown RBP29.9■■■□□ 2.38
CSNK1E-203ENST00000396832 CCDC173Q0VFZ6 552 aa29.88■■■□□ 2.37
CSNK1E-203ENST00000396832 USP32Q8NFA0 1604 aa29.88■■■□□ 2.37
CSNK1E-203ENST00000396832 CHD1LQ86WJ1 897 aa29.88■■■□□ 2.37
CSNK1E-203ENST00000396832 ARHGEF28Q8N1W1 1705 aaKnown RBP29.88■■■□□ 2.37
CSNK1E-203ENST00000396832 CAMSAP1Q5T5Y3 1602 aa29.87■■■□□ 2.37
CSNK1E-203ENST00000396832 DIAPH1O60610 1272 aaKnown RBP29.87■■■□□ 2.37
CSNK1E-203ENST00000396832 RAPGEF3O95398 923 aa29.87■■■□□ 2.37
CSNK1E-203ENST00000396832 PTMSP20962 102 aa29.87■■■□□ 2.37
CSNK1E-203ENST00000396832 NUCB1Q02818 461 aa29.87■■■□□ 2.37
CSNK1E-203ENST00000396832 PRAM1Q96QH2 718 aa29.87■■■□□ 2.37
CSNK1E-203ENST00000396832 VGFO15240 615 aaPredicted RBP29.86■■■□□ 2.37
CSNK1E-203ENST00000396832 PRKAR2BP31323 418 aa29.86■■■□□ 2.37
CSNK1E-203ENST00000396832 NSD2O96028 1365 aa29.85■■■□□ 2.37
CSNK1E-203ENST00000396832 CT47B1P0C2W7 299 aaPredicted RBP29.85■■■□□ 2.37
CSNK1E-203ENST00000396832 PPP1R9BQ96SB3 815 aa29.85■■■□□ 2.37
CSNK1E-203ENST00000396832 ABCC11Q96J66 1382 aa29.85■■■□□ 2.37
CSNK1E-203ENST00000396832 NASPP49321 788 aaPredicted RBP29.85■■■□□ 2.37
CSNK1E-203ENST00000396832 KIF16BQ96L93 1317 aa29.84■■■□□ 2.37
CSNK1E-203ENST00000396832 ZSCAN30Q86W11 494 aa29.84■■■□□ 2.37
CSNK1E-203ENST00000396832 TSPYL6Q8N831 410 aa29.84■■■□□ 2.37
CSNK1E-203ENST00000396832 IDI1Q13907 227 aa29.83■■■□□ 2.37
CSNK1E-203ENST00000396832 IPO8O15397 1037 aaKnown RBP29.82■■■□□ 2.36
CSNK1E-203ENST00000396832 LMTK2Q8IWU2 1503 aa29.81■■■□□ 2.36
CSNK1E-203ENST00000396832 ANP32BQ92688 251 aaKnown RBP29.81■■■□□ 2.36
CSNK1E-203ENST00000396832 OFD1O75665 1012 aa29.8■■■□□ 2.36
CSNK1E-203ENST00000396832 PHACTR3Q96KR7 559 aa29.8■■■□□ 2.36
CSNK1E-203ENST00000396832 COL3A1P02461 1466 aaPredicted RBP29.8■■■□□ 2.36
CSNK1E-203ENST00000396832 FRMPD1Q5SYB0 1578 aa29.8■■■□□ 2.36
CSNK1E-203ENST00000396832 KIF2CQ99661 725 aa29.8■■■□□ 2.36
CSNK1E-203ENST00000396832 CABP1Q9NZU7 370 aa29.8■■■□□ 2.36
CSNK1E-203ENST00000396832 SIGLEC1Q9BZZ2 1709 aa29.79■■■□□ 2.36
CSNK1E-203ENST00000396832 RPGRIP1LQ68CZ1 1315 aa29.79■■■□□ 2.36
CSNK1E-203ENST00000396832 TERF2IPQ9NYB0 399 aa29.78■■■□□ 2.36
CSNK1E-203ENST00000396832 ATAD2Q6PL18 1390 aa29.78■■■□□ 2.36
CSNK1E-203ENST00000396832 MSNP26038 577 aaKnown RBP29.77■■■□□ 2.36
CSNK1E-203ENST00000396832 SSFA2P28290 1259 aa29.76■■■□□ 2.36
CSNK1E-203ENST00000396832 TBC1D9Q6ZT07 1266 aa29.76■■■□□ 2.36
CSNK1E-203ENST00000396832 PPIP5K1Q6PFW1 1433 aa29.76■■■□□ 2.35
CSNK1E-203ENST00000396832 GOLGA6L22H0YM25 854 aa29.75■■■□□ 2.35
CSNK1E-203ENST00000396832 AK9Q5TCS8 1911 aa29.75■■■□□ 2.35
CSNK1E-203ENST00000396832 K7ELQ4 463 aaPredicted RBP29.75■■■□□ 2.35
CSNK1E-203ENST00000396832 DDX49Q9Y6V7 483 aaKnown RBP29.75■■■□□ 2.35
CSNK1E-203ENST00000396832 ABCC3O15438 1527 aa29.74■■■□□ 2.35
CSNK1E-203ENST00000396832 NCBP3Q53F19 620 aaKnown RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms