RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 TRPM3Q9HCF6 1732 aaPredicted RBP15.78■□□□□ 0.12
NDUFA9-202ENST00000396655 MARF1Q9Y4F3 1742 aaKnown RBP15.78■□□□□ 0.12
NDUFA9-202ENST00000396655 RBM6P78332 1123 aaKnown RBP15.78■□□□□ 0.12
NDUFA9-202ENST00000396655 SRPK2P78362 688 aaKnown RBP15.78■□□□□ 0.12
NDUFA9-202ENST00000396655 CARD11Q9BXL7 1154 aa15.78■□□□□ 0.12
NDUFA9-202ENST00000396655 QRICH2Q9H0J4 1663 aa15.78■□□□□ 0.12
NDUFA9-202ENST00000396655 TOPAZ1Q8N9V7 1692 aa15.77■□□□□ 0.12
NDUFA9-202ENST00000396655 SLC24A1O60721 1099 aa15.77■□□□□ 0.12
NDUFA9-202ENST00000396655 USP21Q9UK80 565 aa15.77■□□□□ 0.12
NDUFA9-202ENST00000396655 TRPC5Q9UL62 973 aaPredicted RBP15.77■□□□□ 0.12
NDUFA9-202ENST00000396655 ACEP12821 1306 aa15.76■□□□□ 0.11
NDUFA9-202ENST00000396655 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
NDUFA9-202ENST00000396655 ALS2Q96Q42 1657 aa15.76■□□□□ 0.11
NDUFA9-202ENST00000396655 LMOD2Q6P5Q4 547 aa15.75■□□□□ 0.11
NDUFA9-202ENST00000396655 BCL9LQ86UU0 1499 aa15.74■□□□□ 0.11
NDUFA9-202ENST00000396655 HAP1P54257 671 aaPredicted RBP15.74■□□□□ 0.11
NDUFA9-202ENST00000396655 CABP2Q9NPB3 220 aa15.74■□□□□ 0.11
NDUFA9-202ENST00000396655 PUS7Q96PZ0 661 aaKnown RBP15.73■□□□□ 0.11
NDUFA9-202ENST00000396655 PPIP5K1Q6PFW1 1433 aa15.73■□□□□ 0.11
NDUFA9-202ENST00000396655 SLIT2O94813 1529 aa15.73■□□□□ 0.11
NDUFA9-202ENST00000396655 PAK3O75914 559 aaPredicted RBP15.72■□□□□ 0.11
NDUFA9-202ENST00000396655 UNC5CLQ8IV45 518 aa15.72■□□□□ 0.11
NDUFA9-202ENST00000396655 CABLES1Q8TDN4 633 aa15.72■□□□□ 0.11
NDUFA9-202ENST00000396655 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
NDUFA9-202ENST00000396655 ATRNO75882 1429 aa15.71■□□□□ 0.11
NDUFA9-202ENST00000396655 CABP1Q9NZU7 370 aa15.71■□□□□ 0.11
NDUFA9-202ENST00000396655 ATAD2Q6PL18 1390 aa15.71■□□□□ 0.11
NDUFA9-202ENST00000396655 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.7■□□□□ 0.1
NDUFA9-202ENST00000396655 RGS12O14924 1447 aa15.69■□□□□ 0.1
NDUFA9-202ENST00000396655 ABCA3Q99758 1704 aa15.69■□□□□ 0.1
NDUFA9-202ENST00000396655 NWD2Q9ULI1 1742 aa15.68■□□□□ 0.1
NDUFA9-202ENST00000396655 EP400Q96L91 3159 aa15.68■□□□□ 0.1
NDUFA9-202ENST00000396655 FAM83GA6ND36 823 aa15.68■□□□□ 0.1
NDUFA9-202ENST00000396655 GJD4Q96KN9 370 aaPredicted RBP15.68■□□□□ 0.1
NDUFA9-202ENST00000396655 NLRP13Q86W25 1043 aa15.67■□□□□ 0.1
NDUFA9-202ENST00000396655 ABTB2Q8N961 1025 aa15.67■□□□□ 0.1
NDUFA9-202ENST00000396655 USP6P35125 1406 aa15.67■□□□□ 0.1
NDUFA9-202ENST00000396655 CRYBG1Q9Y4K1 1723 aa15.66■□□□□ 0.1
NDUFA9-202ENST00000396655 VPS72Q15906 364 aa15.66■□□□□ 0.1
NDUFA9-202ENST00000396655 SSH2Q76I76 1423 aa15.66■□□□□ 0.1
NDUFA9-202ENST00000396655 CPSF1Q10570 1443 aaKnown RBP15.65■□□□□ 0.1
NDUFA9-202ENST00000396655 USP19O94966 1318 aa15.65■□□□□ 0.1
NDUFA9-202ENST00000396655 ST20-MTHFSA0A0A6YYL1 179 aa15.64■□□□□ 0.09
NDUFA9-202ENST00000396655 ONECUT3O60422 494 aaPredicted RBP15.64■□□□□ 0.09
NDUFA9-202ENST00000396655 TESK2Q96S53 571 aa15.64■□□□□ 0.09
NDUFA9-202ENST00000396655 COL14A1Q05707 1796 aaKnown RBP15.64■□□□□ 0.09
NDUFA9-202ENST00000396655 TTC21AQ8NDW8 1320 aa15.63■□□□□ 0.09
NDUFA9-202ENST00000396655 CPDO75976 1380 aa15.62■□□□□ 0.09
NDUFA9-202ENST00000396655 CCER1Q8TC90 406 aaPredicted RBP15.62■□□□□ 0.09
NDUFA9-202ENST00000396655 PRDM11Q9NQV5 511 aa15.62■□□□□ 0.09
NDUFA9-202ENST00000396655 BTG4Q9NY30 223 aa15.62■□□□□ 0.09
NDUFA9-202ENST00000396655 PLCH1Q4KWH8 1693 aa15.62■□□□□ 0.09
NDUFA9-202ENST00000396655 NINLQ9Y2I6 1382 aa15.62■□□□□ 0.09
NDUFA9-202ENST00000396655 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
NDUFA9-202ENST00000396655 GCP02774 474 aa15.61■□□□□ 0.09
NDUFA9-202ENST00000396655 AKAP12Q02952 1782 aa15.6■□□□□ 0.09
NDUFA9-202ENST00000396655 NLRP6P59044 892 aa15.6■□□□□ 0.09
NDUFA9-202ENST00000396655 TTC21BQ7Z4L5 1316 aa15.6■□□□□ 0.09
NDUFA9-202ENST00000396655 PHRF1Q9P1Y6 1649 aaKnown RBP15.6■□□□□ 0.09
NDUFA9-202ENST00000396655 KTN1Q86UP2 1357 aaKnown RBP15.6■□□□□ 0.09
NDUFA9-202ENST00000396655 KIAA0232Q92628 1395 aa15.6■□□□□ 0.09
NDUFA9-202ENST00000396655 NUTM2GQ5VZR2 741 aa15.59■□□□□ 0.09
NDUFA9-202ENST00000396655 TERF2IPQ9NYB0 399 aa15.59■□□□□ 0.09
NDUFA9-202ENST00000396655 USP47Q96K76 1375 aa15.59■□□□□ 0.09
NDUFA9-202ENST00000396655 GLI3P10071 1580 aa15.58■□□□□ 0.09
NDUFA9-202ENST00000396655 ZC3H6P61129 1189 aaKnown RBP15.58■□□□□ 0.08
NDUFA9-202ENST00000396655 CDCA8Q53HL2 280 aa15.58■□□□□ 0.08
NDUFA9-202ENST00000396655 HDGFL2Q7Z4V5 671 aaPredicted RBP15.58■□□□□ 0.08
NDUFA9-202ENST00000396655 TMF1P82094 1093 aa15.57■□□□□ 0.08
NDUFA9-202ENST00000396655 KCNH5Q8NCM2 988 aa15.57■□□□□ 0.08
NDUFA9-202ENST00000396655 ZRANB1Q9UGI0 708 aa15.57■□□□□ 0.08
NDUFA9-202ENST00000396655 NRAPQ86VF7 1730 aa15.57■□□□□ 0.08
NDUFA9-202ENST00000396655 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
NDUFA9-202ENST00000396655 SLC12A5Q9H2X9 1139 aa15.56■□□□□ 0.08
NDUFA9-202ENST00000396655 SPATA31A5Q5VU36 1347 aa15.56■□□□□ 0.08
NDUFA9-202ENST00000396655 SPATA31A7Q8IWB4 1347 aa15.56■□□□□ 0.08
NDUFA9-202ENST00000396655 CD163L1Q9NR16 1453 aa15.56■□□□□ 0.08
NDUFA9-202ENST00000396655 SLIT3O75094 1523 aa15.56■□□□□ 0.08
NDUFA9-202ENST00000396655 NRKQ7Z2Y5 1582 aa15.56■□□□□ 0.08
NDUFA9-202ENST00000396655 MON2Q7Z3U7 1717 aa15.55■□□□□ 0.08
NDUFA9-202ENST00000396655 CCDC125Q86Z20 511 aa15.55■□□□□ 0.08
NDUFA9-202ENST00000396655 CCDC9Q9Y3X0 531 aaKnown RBP15.55■□□□□ 0.08
NDUFA9-202ENST00000396655 PIK3C2AO00443 1686 aa15.54■□□□□ 0.08
NDUFA9-202ENST00000396655 EDC4Q6P2E9 1401 aaKnown RBP15.54■□□□□ 0.08
NDUFA9-202ENST00000396655 AATKQ6ZMQ8 1374 aa15.54■□□□□ 0.08
NDUFA9-202ENST00000396655 USP31Q70CQ4 1352 aa15.54■□□□□ 0.08
NDUFA9-202ENST00000396655 CHRNA2Q15822 529 aa15.54■□□□□ 0.08
NDUFA9-202ENST00000396655 SEPT12Q8IYM1 358 aa15.54■□□□□ 0.08
NDUFA9-202ENST00000396655 SPATA31A1Q5TZJ5 1347 aa15.52■□□□□ 0.08
NDUFA9-202ENST00000396655 LMO7Q8WWI1 1683 aa15.52■□□□□ 0.08
NDUFA9-202ENST00000396655 EVA1CP58658 441 aa15.52■□□□□ 0.08
NDUFA9-202ENST00000396655 ARHGEF25Q86VW2 580 aa15.52■□□□□ 0.08
NDUFA9-202ENST00000396655 A0A1W2PP64 1363 aa15.51■□□□□ 0.07
NDUFA9-202ENST00000396655 CAMTA1Q9Y6Y1 1673 aa15.51■□□□□ 0.07
NDUFA9-202ENST00000396655 THRAP3Q9Y2W1 955 aaKnown RBP15.51■□□□□ 0.07
NDUFA9-202ENST00000396655 USP54Q70EL1 1684 aa15.51■□□□□ 0.07
NDUFA9-202ENST00000396655 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
NDUFA9-202ENST00000396655 BARGINQ6ZT62 677 aa15.5■□□□□ 0.07
NDUFA9-202ENST00000396655 KRT27Q7Z3Y8 459 aa15.49■□□□□ 0.07
NDUFA9-202ENST00000396655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms