RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 U2SURPO15042 1029 aaKnown RBP20.31■□□□□ 0.84
PDE1C-202ENST00000396182 DZIP1LQ8IYY4 767 aaKnown RBP20.31■□□□□ 0.84
PDE1C-202ENST00000396182 PLEKHF1Q96S99 279 aa20.31■□□□□ 0.84
PDE1C-202ENST00000396182 GGNBP2Q9H3C7 697 aa20.31■□□□□ 0.84
PDE1C-202ENST00000396182 HECW2Q9P2P5 1572 aa20.3■□□□□ 0.84
PDE1C-202ENST00000396182 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
PDE1C-202ENST00000396182 PNNQ9H307 717 aaKnown RBP20.3■□□□□ 0.84
PDE1C-202ENST00000396182 CHMP5Q9NZZ3 219 aa20.3■□□□□ 0.84
PDE1C-202ENST00000396182 STK26Q9P289 416 aa20.3■□□□□ 0.84
PDE1C-202ENST00000396182 FTSJ3Q8IY81 847 aaKnown RBP20.29■□□□□ 0.84
PDE1C-202ENST00000396182 ARHGEF28Q8N1W1 1705 aaKnown RBP20.29■□□□□ 0.84
PDE1C-202ENST00000396182 NPM1P06748 294 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDE1C-202ENST00000396182 SIGLEC1Q9BZZ2 1709 aa20.29■□□□□ 0.84
PDE1C-202ENST00000396182 A0A1W2PP64 1363 aa20.29■□□□□ 0.84
PDE1C-202ENST00000396182 TRAK2O60296 914 aa20.28■□□□□ 0.84
PDE1C-202ENST00000396182 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
PDE1C-202ENST00000396182 ADGRB2O60241 1585 aa20.28■□□□□ 0.84
PDE1C-202ENST00000396182 TMPOP42166 694 aaKnown RBP20.28■□□□□ 0.84
PDE1C-202ENST00000396182 C22orf23Q9BZE7 217 aa20.28■□□□□ 0.84
PDE1C-202ENST00000396182 RAPGEF3O95398 923 aa20.27■□□□□ 0.84
PDE1C-202ENST00000396182 NAP1L5Q96NT1 182 aaPredicted RBP20.27■□□□□ 0.84
PDE1C-202ENST00000396182 SMC4Q9NTJ3 1288 aa20.27■□□□□ 0.84
PDE1C-202ENST00000396182 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.84
PDE1C-202ENST00000396182 SRPK2P78362 688 aaKnown RBP20.27■□□□□ 0.84
PDE1C-202ENST00000396182 IDI1Q13907 227 aa20.27■□□□□ 0.84
PDE1C-202ENST00000396182 TRIM27P14373 513 aa20.26■□□□□ 0.83
PDE1C-202ENST00000396182 SSH1Q8WYL5 1049 aa20.26■□□□□ 0.83
PDE1C-202ENST00000396182 MRE11P49959 708 aa20.26■□□□□ 0.83
PDE1C-202ENST00000396182 ABCC11Q96J66 1382 aa20.26■□□□□ 0.83
PDE1C-202ENST00000396182 CAMSAP1Q5T5Y3 1602 aa20.26■□□□□ 0.83
PDE1C-202ENST00000396182 CT47B1P0C2W7 299 aaPredicted RBP20.25■□□□□ 0.83
PDE1C-202ENST00000396182 MFAP1P55081 439 aaKnown RBP20.25■□□□□ 0.83
PDE1C-202ENST00000396182 FYB1O15117 783 aa20.24■□□□□ 0.83
PDE1C-202ENST00000396182 ZNF692Q9BU19 519 aaPredicted RBP20.23■□□□□ 0.83
PDE1C-202ENST00000396182 PIK3C2BO00750 1634 aa20.23■□□□□ 0.83
PDE1C-202ENST00000396182 ITPRIPQ8IWB1 547 aa20.22■□□□□ 0.83
PDE1C-202ENST00000396182 NOB1Q9ULX3 412 aaKnown RBP20.22■□□□□ 0.83
PDE1C-202ENST00000396182 NCOA3Q9Y6Q9 1424 aa20.22■□□□□ 0.83
PDE1C-202ENST00000396182 ATF7IPQ6VMQ6 1270 aa20.22■□□□□ 0.83
PDE1C-202ENST00000396182 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
PDE1C-202ENST00000396182 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
PDE1C-202ENST00000396182 DDX11L8A8MPP1 907 aa20.21■□□□□ 0.83
PDE1C-202ENST00000396182 GRPEL1Q9HAV7 217 aa20.21■□□□□ 0.83
PDE1C-202ENST00000396182 RIPK4P57078 832 aa20.2■□□□□ 0.82
PDE1C-202ENST00000396182 HDAC1Q13547 482 aaPredicted RBP20.2■□□□□ 0.82
PDE1C-202ENST00000396182 HSCBQ8IWL3 235 aa20.19■□□□□ 0.82
PDE1C-202ENST00000396182 DDX19BQ9UMR2 479 aa20.19■□□□□ 0.82
PDE1C-202ENST00000396182 CFAP74Q9C0B2 1584 aa20.19■□□□□ 0.82
PDE1C-202ENST00000396182 PRAM1Q96QH2 718 aa20.19■□□□□ 0.82
PDE1C-202ENST00000396182 DDIT3P35638 169 aa20.18■□□□□ 0.82
PDE1C-202ENST00000396182 TMEM57Q8N5G2 664 aa20.18■□□□□ 0.82
PDE1C-202ENST00000396182 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
PDE1C-202ENST00000396182 TERF2IPQ9NYB0 399 aa20.17■□□□□ 0.82
PDE1C-202ENST00000396182 CD163L1Q9NR16 1453 aa20.17■□□□□ 0.82
PDE1C-202ENST00000396182 GLIPR1L2Q4G1C9 344 aa20.17■□□□□ 0.82
PDE1C-202ENST00000396182 IL16Q14005 1332 aa20.17■□□□□ 0.82
PDE1C-202ENST00000396182 HSP90AA1P07900 732 aaKnown RBP20.16■□□□□ 0.82
PDE1C-202ENST00000396182 ERBB4Q15303 1308 aa20.16■□□□□ 0.82
PDE1C-202ENST00000396182 DIAPH1O60610 1272 aaKnown RBP20.16■□□□□ 0.82
PDE1C-202ENST00000396182 SLC52A1Q9NWF4 448 aa20.16■□□□□ 0.82
PDE1C-202ENST00000396182 ZFYVE9O95405 1425 aa20.16■□□□□ 0.82
PDE1C-202ENST00000396182 SMC5Q8IY18 1101 aa20.15■□□□□ 0.82
PDE1C-202ENST00000396182 ZBTB40Q9NUA8 1239 aa20.15■□□□□ 0.82
PDE1C-202ENST00000396182 ESPNB1AK53 854 aa20.15■□□□□ 0.82
PDE1C-202ENST00000396182 OSCARQ8IYS5 282 aa20.15■□□□□ 0.82
PDE1C-202ENST00000396182 PTPRMP28827 1452 aa20.15■□□□□ 0.82
PDE1C-202ENST00000396182 ATAD2Q6PL18 1390 aa20.15■□□□□ 0.82
PDE1C-202ENST00000396182 ARHGAP31Q2M1Z3 1444 aa20.14■□□□□ 0.81
PDE1C-202ENST00000396182 RRP9O43818 475 aaKnown RBP20.14■□□□□ 0.81
PDE1C-202ENST00000396182 FBLN1P23142 703 aa20.14■□□□□ 0.81
PDE1C-202ENST00000396182 HSP90AA2PQ14568 343 aaPredicted RBP20.13■□□□□ 0.81
PDE1C-202ENST00000396182 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
PDE1C-202ENST00000396182 PNPLA6Q8IY17 1366 aa20.12■□□□□ 0.81
PDE1C-202ENST00000396182 DIP2CQ9Y2E4 1556 aa20.12■□□□□ 0.81
PDE1C-202ENST00000396182 RBM25P49756 843 aaKnown RBP20.12■□□□□ 0.81
PDE1C-202ENST00000396182 CDK19Q9BWU1 502 aa20.12■□□□□ 0.81
PDE1C-202ENST00000396182 SNX21Q969T3 373 aa20.11■□□□□ 0.81
PDE1C-202ENST00000396182 MED14O60244 1454 aa20.11■□□□□ 0.81
PDE1C-202ENST00000396182 YTHDC2Q9H6S0 1430 aaKnown RBP20.11■□□□□ 0.81
PDE1C-202ENST00000396182 TNPO1Q92973 898 aaKnown RBP20.11■□□□□ 0.81
PDE1C-202ENST00000396182 MYO5BQ9ULV0 1848 aa20.1■□□□□ 0.81
PDE1C-202ENST00000396182 HDGFL2Q7Z4V5 671 aaPredicted RBP20.1■□□□□ 0.81
PDE1C-202ENST00000396182 KIF16BQ96L93 1317 aa20.1■□□□□ 0.81
PDE1C-202ENST00000396182 IPO8O15397 1037 aaKnown RBP20.1■□□□□ 0.81
PDE1C-202ENST00000396182 GAS2L3Q86XJ1 694 aa20.09■□□□□ 0.81
PDE1C-202ENST00000396182 PKNOX2Q96KN3 472 aa20.08■□□□□ 0.81
PDE1C-202ENST00000396182 CIZ1Q9ULV3 898 aaPredicted RBP20.08■□□□□ 0.81
PDE1C-202ENST00000396182 FCHSD2O94868 740 aa20.08■□□□□ 0.8
PDE1C-202ENST00000396182 FBXO31Q5XUX0 539 aaPredicted RBP20.08■□□□□ 0.8
PDE1C-202ENST00000396182 NEO1Q92859 1461 aa20.08■□□□□ 0.8
PDE1C-202ENST00000396182 YEATS2Q9ULM3 1422 aa20.08■□□□□ 0.8
PDE1C-202ENST00000396182 PRKAR2BP31323 418 aa20.07■□□□□ 0.8
PDE1C-202ENST00000396182 NUCB1Q02818 461 aa20.07■□□□□ 0.8
PDE1C-202ENST00000396182 ALDH1L2Q3SY69 923 aa20.07■□□□□ 0.8
PDE1C-202ENST00000396182 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
PDE1C-202ENST00000396182 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.07■□□□□ 0.8
PDE1C-202ENST00000396182 LNPKQ9C0E8 428 aa20.07■□□□□ 0.8
PDE1C-202ENST00000396182 ANKRD26Q9UPS8 1709 aa20.07■□□□□ 0.8
PDE1C-202ENST00000396182 RAB3GAP1Q15042 981 aa20.06■□□□□ 0.8
PDE1C-202ENST00000396182 TMEM131LA2VDJ0 1609 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms