RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 MON2Q7Z3U7 1717 aa21.79■■□□□ 1.08
NUP50-202ENST00000396096 MYH16Q9H6N6 1097 aa21.79■■□□□ 1.08
NUP50-202ENST00000396096 PDE4AP27815 886 aa21.77■■□□□ 1.08
NUP50-202ENST00000396096 BACH2Q9BYV9 841 aa21.77■■□□□ 1.08
NUP50-202ENST00000396096 AKAP12Q02952 1782 aa21.77■■□□□ 1.08
NUP50-202ENST00000396096 PPIP5K1Q6PFW1 1433 aa21.77■■□□□ 1.08
NUP50-202ENST00000396096 RARSP54136 660 aaKnown RBP21.77■■□□□ 1.08
NUP50-202ENST00000396096 ADAMTS13Q76LX8 1427 aa21.76■■□□□ 1.07
NUP50-202ENST00000396096 DIAPH1O60610 1272 aaKnown RBP21.75■■□□□ 1.07
NUP50-202ENST00000396096 ANP32AP39687 249 aaKnown RBP21.75■■□□□ 1.07
NUP50-202ENST00000396096 PNNQ9H307 717 aaKnown RBP21.75■■□□□ 1.07
NUP50-202ENST00000396096 U2SURPO15042 1029 aaKnown RBP21.75■■□□□ 1.07
NUP50-202ENST00000396096 MAP2P11137 1827 aaKnown RBP21.74■■□□□ 1.07
NUP50-202ENST00000396096 CT47B1P0C2W7 299 aaPredicted RBP21.74■■□□□ 1.07
NUP50-202ENST00000396096 TMPOP42166 694 aaKnown RBP21.74■■□□□ 1.07
NUP50-202ENST00000396096 TXNDC2Q86VQ3 553 aa21.74■■□□□ 1.07
NUP50-202ENST00000396096 ITSN1Q15811 1721 aa21.74■■□□□ 1.07
NUP50-202ENST00000396096 PLEKHG1Q9ULL1 1385 aa21.73■■□□□ 1.07
NUP50-202ENST00000396096 IL16Q14005 1332 aa21.73■■□□□ 1.07
NUP50-202ENST00000396096 AAMPQ13685 434 aa21.73■■□□□ 1.07
NUP50-202ENST00000396096 C3P01024 1663 aa21.72■■□□□ 1.07
NUP50-202ENST00000396096 ERICH6Q7L0X2 663 aa21.72■■□□□ 1.07
NUP50-202ENST00000396096 MAPK8IP3Q9UPT6 1336 aa21.72■■□□□ 1.07
NUP50-202ENST00000396096 NUDT16Q96DE0 195 aaKnown RBP21.71■■□□□ 1.07
NUP50-202ENST00000396096 TRIM35Q9UPQ4 493 aa21.71■■□□□ 1.07
NUP50-202ENST00000396096 AATKQ6ZMQ8 1374 aa21.71■■□□□ 1.07
NUP50-202ENST00000396096 LRRC7Q96NW7 1537 aa21.71■■□□□ 1.07
NUP50-202ENST00000396096 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.71■■□□□ 1.07
NUP50-202ENST00000396096 IPO9Q96P70 1041 aaKnown RBP21.71■■□□□ 1.07
NUP50-202ENST00000396096 POLKQ9UBT6 870 aa21.71■■□□□ 1.07
NUP50-202ENST00000396096 CCDC61Q9Y6R9 512 aa21.7■■□□□ 1.06
NUP50-202ENST00000396096 CDK12Q9NYV4 1490 aaPredicted RBP21.7■■□□□ 1.06
NUP50-202ENST00000396096 TOPAZ1Q8N9V7 1692 aa21.69■■□□□ 1.06
NUP50-202ENST00000396096 FCHSD2O94868 740 aa21.69■■□□□ 1.06
NUP50-202ENST00000396096 CANXP27824 592 aaKnown RBP21.69■■□□□ 1.06
NUP50-202ENST00000396096 NOP58Q9Y2X3 529 aaKnown RBP21.69■■□□□ 1.06
NUP50-202ENST00000396096 ROBO2Q9HCK4 1378 aa21.68■■□□□ 1.06
NUP50-202ENST00000396096 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.68■■□□□ 1.06
NUP50-202ENST00000396096 SLIT1O75093 1534 aa21.68■■□□□ 1.06
NUP50-202ENST00000396096 ARHGAP23Q9P227 1491 aa21.67■■□□□ 1.06
NUP50-202ENST00000396096 PANK1Q8TE04 598 aa21.66■■□□□ 1.06
NUP50-202ENST00000396096 CLUAP1Q96AJ1 413 aa21.66■■□□□ 1.06
NUP50-202ENST00000396096 NRKQ7Z2Y5 1582 aa21.66■■□□□ 1.06
NUP50-202ENST00000396096 SKAP1Q86WV1 359 aa21.65■■□□□ 1.06
NUP50-202ENST00000396096 ZNF692Q9BU19 519 aaPredicted RBP21.65■■□□□ 1.06
NUP50-202ENST00000396096 RSPH6AQ9H0K4 717 aa21.64■■□□□ 1.06
NUP50-202ENST00000396096 COG6Q9Y2V7 657 aa21.64■■□□□ 1.06
NUP50-202ENST00000396096 FER1L4A9Z1Z3 1794 aa21.64■■□□□ 1.06
NUP50-202ENST00000396096 PRR36Q9H6K5 1346 aa21.64■■□□□ 1.05
NUP50-202ENST00000396096 LTKP29376 864 aa21.64■■□□□ 1.05
NUP50-202ENST00000396096 FRAT1Q92837 279 aaPredicted RBP21.64■■□□□ 1.05
NUP50-202ENST00000396096 RIPK4P57078 832 aa21.63■■□□□ 1.05
NUP50-202ENST00000396096 NME9Q86XW9 330 aa21.63■■□□□ 1.05
NUP50-202ENST00000396096 IL13P35225 146 aa21.6■■□□□ 1.05
NUP50-202ENST00000396096 TSR2Q969E8 191 aaKnown RBP21.6■■□□□ 1.05
NUP50-202ENST00000396096 COG3Q96JB2 828 aa21.6■■□□□ 1.05
NUP50-202ENST00000396096 DIP2AQ14689 1571 aa21.6■■□□□ 1.05
NUP50-202ENST00000396096 PTPRUQ92729 1446 aa21.6■■□□□ 1.05
NUP50-202ENST00000396096 IGHDP01880 384 aa21.6■■□□□ 1.05
NUP50-202ENST00000396096 NCKAP5LQ9HCH0 1330 aa21.59■■□□□ 1.05
NUP50-202ENST00000396096 RLBP1P12271 317 aa21.59■■□□□ 1.05
NUP50-202ENST00000396096 EXOSC9Q06265 439 aaKnown RBP21.59■■□□□ 1.05
NUP50-202ENST00000396096 EMILIN1Q9Y6C2 1016 aa21.59■■□□□ 1.05
NUP50-202ENST00000396096 PLEKHG3A1L390 1219 aa21.58■■□□□ 1.05
NUP50-202ENST00000396096 FBLN1P23142 703 aa21.58■■□□□ 1.05
NUP50-202ENST00000396096 PRKAR2BP31323 418 aa21.58■■□□□ 1.05
NUP50-202ENST00000396096 ZKSCAN2Q63HK3 967 aa21.58■■□□□ 1.05
NUP50-202ENST00000396096 EID1Q9Y6B2 187 aa21.58■■□□□ 1.05
NUP50-202ENST00000396096 FAM161AQ3B820 660 aa21.58■■□□□ 1.04
NUP50-202ENST00000396096 PTCH1Q13635 1447 aa21.57■■□□□ 1.04
NUP50-202ENST00000396096 PAK3O75914 559 aaPredicted RBP21.57■■□□□ 1.04
NUP50-202ENST00000396096 NEFMP07197 916 aa21.57■■□□□ 1.04
NUP50-202ENST00000396096 CEBPAP49715 358 aaPredicted RBP21.57■■□□□ 1.04
NUP50-202ENST00000396096 PMFBP1Q8TBY8 1022 aa21.57■■□□□ 1.04
NUP50-202ENST00000396096 BCL2L13Q9BXK5 485 aa21.57■■□□□ 1.04
NUP50-202ENST00000396096 ZBTB47Q9UFB7 747 aaPredicted RBP21.57■■□□□ 1.04
NUP50-202ENST00000396096 ZRANB1Q9UGI0 708 aa21.57■■□□□ 1.04
NUP50-202ENST00000396096 NALCNQ8IZF0 1738 aa21.57■■□□□ 1.04
NUP50-202ENST00000396096 VIRMAQ69YN4 1812 aaKnown RBP21.56■■□□□ 1.04
NUP50-202ENST00000396096 PPM1GO15355 546 aaPredicted RBP21.56■■□□□ 1.04
NUP50-202ENST00000396096 NFE2L2Q16236 605 aa21.56■■□□□ 1.04
NUP50-202ENST00000396096 TNNQ9UQP3 1299 aa21.56■■□□□ 1.04
NUP50-202ENST00000396096 TBX22Q9Y458 520 aa21.56■■□□□ 1.04
NUP50-202ENST00000396096 MVPQ14764 893 aaKnown RBP21.55■■□□□ 1.04
NUP50-202ENST00000396096 C8orf34Q49A92 452 aa21.54■■□□□ 1.04
NUP50-202ENST00000396096 OVOS2A0A0J9YW53 1432 aa21.54■■□□□ 1.04
NUP50-202ENST00000396096 OVOS2Q6IE36 1432 aa21.54■■□□□ 1.04
NUP50-202ENST00000396096 TTC21BQ7Z4L5 1316 aa21.53■■□□□ 1.04
NUP50-202ENST00000396096 USP6P35125 1406 aa21.53■■□□□ 1.04
NUP50-202ENST00000396096 DZIP1LQ8IYY4 767 aaKnown RBP21.53■■□□□ 1.04
NUP50-202ENST00000396096 SSH1Q8WYL5 1049 aa21.53■■□□□ 1.04
NUP50-202ENST00000396096 SMC4Q9NTJ3 1288 aa21.53■■□□□ 1.04
NUP50-202ENST00000396096 RIMS1Q86UR5 1692 aaKnown RBP21.52■■□□□ 1.04
NUP50-202ENST00000396096 CALD1Q05682 793 aaKnown RBP21.52■■□□□ 1.04
NUP50-202ENST00000396096 NPM2Q86SE8 214 aaKnown RBP21.52■■□□□ 1.04
NUP50-202ENST00000396096 XRN1Q8IZH2 1706 aaKnown RBP21.52■■□□□ 1.04
NUP50-202ENST00000396096 DLG5Q8TDM6 1919 aa21.52■■□□□ 1.04
NUP50-202ENST00000396096 ALDH1L2Q3SY69 923 aa21.52■■□□□ 1.03
NUP50-202ENST00000396096 ZNF428Q96B54 188 aa21.52■■□□□ 1.03
NUP50-202ENST00000396096 PHACTR3Q96KR7 559 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms