RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 TTC21AQ8NDW8 1320 aa15.85■□□□□ 0.13
GTF2A2-202ENST00000396060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.84■□□□□ 0.13
GTF2A2-202ENST00000396060 TNNT2P45379 298 aaPredicted RBP15.83■□□□□ 0.13
GTF2A2-202ENST00000396060 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
GTF2A2-202ENST00000396060 SMG6Q86US8 1419 aaKnown RBP15.83■□□□□ 0.12
GTF2A2-202ENST00000396060 NME9Q86XW9 330 aa15.83■□□□□ 0.12
GTF2A2-202ENST00000396060 SHPRHQ149N8 1683 aa15.82■□□□□ 0.12
GTF2A2-202ENST00000396060 USP31Q70CQ4 1352 aa15.82■□□□□ 0.12
GTF2A2-202ENST00000396060 RGPD8O14715 1765 aaPredicted RBP15.82■□□□□ 0.12
GTF2A2-202ENST00000396060 COL3A1P02461 1466 aaPredicted RBP15.82■□□□□ 0.12
GTF2A2-202ENST00000396060 PROSER2Q86WR7 435 aaPredicted RBP15.82■□□□□ 0.12
GTF2A2-202ENST00000396060 COG3Q96JB2 828 aa15.82■□□□□ 0.12
GTF2A2-202ENST00000396060 NUTM2FA1L443 756 aa15.81■□□□□ 0.12
GTF2A2-202ENST00000396060 HSPA2P54652 639 aa15.81■□□□□ 0.12
GTF2A2-202ENST00000396060 C19orf44Q9H6X5 657 aa15.81■□□□□ 0.12
GTF2A2-202ENST00000396060 POLKQ9UBT6 870 aa15.81■□□□□ 0.12
GTF2A2-202ENST00000396060 OVOS2A0A0J9YW53 1432 aa15.8■□□□□ 0.12
GTF2A2-202ENST00000396060 OVOS2Q6IE36 1432 aa15.8■□□□□ 0.12
GTF2A2-202ENST00000396060 NGDNQ8NEJ9 315 aaKnown RBP15.8■□□□□ 0.12
GTF2A2-202ENST00000396060 STRCQ7RTU9 1775 aa15.79■□□□□ 0.12
GTF2A2-202ENST00000396060 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
GTF2A2-202ENST00000396060 PHF8Q9UPP1 1060 aa15.79■□□□□ 0.12
GTF2A2-202ENST00000396060 NUDCQ9Y266 331 aa15.79■□□□□ 0.12
GTF2A2-202ENST00000396060 DCCP43146 1447 aa15.78■□□□□ 0.12
GTF2A2-202ENST00000396060 ZNF521Q96K83 1311 aa15.77■□□□□ 0.12
GTF2A2-202ENST00000396060 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.11
GTF2A2-202ENST00000396060 MAP2P11137 1827 aaKnown RBP15.77■□□□□ 0.11
GTF2A2-202ENST00000396060 STRCP1A6NGW2 1772 aa15.76■□□□□ 0.11
GTF2A2-202ENST00000396060 RUNDC1Q96C34 613 aa15.76■□□□□ 0.11
GTF2A2-202ENST00000396060 CDK12Q9NYV4 1490 aaPredicted RBP15.76■□□□□ 0.11
GTF2A2-202ENST00000396060 USP54Q70EL1 1684 aa15.76■□□□□ 0.11
GTF2A2-202ENST00000396060 LRRC7Q96NW7 1537 aa15.76■□□□□ 0.11
GTF2A2-202ENST00000396060 DIAPH1O60610 1272 aaKnown RBP15.75■□□□□ 0.11
GTF2A2-202ENST00000396060 TMEM94Q12767 1356 aa15.75■□□□□ 0.11
GTF2A2-202ENST00000396060 C14orf37Q86TY3 774 aa15.74■□□□□ 0.11
GTF2A2-202ENST00000396060 RBM33Q96EV2 1170 aaKnown RBP15.74■□□□□ 0.11
GTF2A2-202ENST00000396060 APAF1O14727 1248 aa15.73■□□□□ 0.11
GTF2A2-202ENST00000396060 PNNQ9H307 717 aaKnown RBP15.73■□□□□ 0.11
GTF2A2-202ENST00000396060 C1orf167Q5SNV9 1468 aa15.72■□□□□ 0.11
GTF2A2-202ENST00000396060 FCHSD2O94868 740 aa15.71■□□□□ 0.11
GTF2A2-202ENST00000396060 U2AF1L5P0DN76 240 aaPredicted RBP15.71■□□□□ 0.11
GTF2A2-202ENST00000396060 U2AF1Q01081 240 aaKnown RBP eCLIP15.71■□□□□ 0.11
GTF2A2-202ENST00000396060 CCDC27Q2M243 656 aa15.71■□□□□ 0.11
GTF2A2-202ENST00000396060 ESCO1Q5FWF5 840 aa15.71■□□□□ 0.11
GTF2A2-202ENST00000396060 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.11
GTF2A2-202ENST00000396060 EMILIN1Q9Y6C2 1016 aa15.71■□□□□ 0.11
GTF2A2-202ENST00000396060 IL13P35225 146 aa15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 CCDC146Q8IYE0 955 aa15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 PLEKHF1Q96S99 279 aa15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 RNF123Q5XPI4 1314 aa15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 KIF24Q5T7B8 1368 aa15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 IQSEC2Q5JU85 1478 aa15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 PIK3C2AO00443 1686 aa15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 FBLN1P23142 703 aa15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 CADPS2Q86UW7 1296 aa15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 TRMT2AQ8IZ69 625 aaKnown RBP15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 MST1RQ04912 1400 aa15.7■□□□□ 0.1
GTF2A2-202ENST00000396060 KIF1AQ12756 1690 aa15.69■□□□□ 0.1
GTF2A2-202ENST00000396060 ATF3P18847 181 aa15.69■□□□□ 0.1
GTF2A2-202ENST00000396060 SUPT16HQ9Y5B9 1047 aaKnown RBP15.69■□□□□ 0.1
GTF2A2-202ENST00000396060 PSME1Q06323 249 aa15.68■□□□□ 0.1
GTF2A2-202ENST00000396060 GOLGA2Q08379 1002 aa15.68■□□□□ 0.1
GTF2A2-202ENST00000396060 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
GTF2A2-202ENST00000396060 ORAI2Q96SN7 254 aa15.68■□□□□ 0.1
GTF2A2-202ENST00000396060 NLRP6P59044 892 aa15.67■□□□□ 0.1
GTF2A2-202ENST00000396060 ERICH6BQ5W0A0 696 aa15.67■□□□□ 0.1
GTF2A2-202ENST00000396060 SALL2Q9Y467 1007 aaPredicted RBP15.67■□□□□ 0.1
GTF2A2-202ENST00000396060 MARF1Q9Y4F3 1742 aaKnown RBP15.66■□□□□ 0.1
GTF2A2-202ENST00000396060 SLFN5Q08AF3 891 aa15.66■□□□□ 0.1
GTF2A2-202ENST00000396060 RRS1Q15050 365 aaKnown RBP15.66■□□□□ 0.1
GTF2A2-202ENST00000396060 ABTB2Q8N961 1025 aa15.66■□□□□ 0.1
GTF2A2-202ENST00000396060 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
GTF2A2-202ENST00000396060 MSH6P52701 1360 aa15.66■□□□□ 0.1
GTF2A2-202ENST00000396060 U2SURPO15042 1029 aaKnown RBP15.66■□□□□ 0.1
GTF2A2-202ENST00000396060 NEFLP07196 543 aa15.66■□□□□ 0.1
GTF2A2-202ENST00000396060 WDR63Q8IWG1 891 aa15.66■□□□□ 0.1
GTF2A2-202ENST00000396060 WWC1Q8IX03 1113 aa15.66■□□□□ 0.1
GTF2A2-202ENST00000396060 SBNO1A3KN83 1393 aa15.65■□□□□ 0.1
GTF2A2-202ENST00000396060 XIRP1Q702N8 1843 aaKnown RBP15.65■□□□□ 0.1
GTF2A2-202ENST00000396060 SENP3-EIF4A1A0A087X0R7 540 aa15.65■□□□□ 0.1
GTF2A2-202ENST00000396060 PPM1GO15355 546 aaPredicted RBP15.65■□□□□ 0.1
GTF2A2-202ENST00000396060 RSPH6AQ9H0K4 717 aa15.65■□□□□ 0.1
GTF2A2-202ENST00000396060 MAP3K19Q56UN5 1328 aa15.64■□□□□ 0.09
GTF2A2-202ENST00000396060 E9PSI1 815 aa15.64■□□□□ 0.09
GTF2A2-202ENST00000396060 DUSP27Q5VZP5 1158 aa15.64■□□□□ 0.09
GTF2A2-202ENST00000396060 FOXO3O43524 673 aa15.63■□□□□ 0.09
GTF2A2-202ENST00000396060 PEAK1Q9H792 1746 aa15.63■□□□□ 0.09
GTF2A2-202ENST00000396060 FLT4P35916 1363 aa15.63■□□□□ 0.09
GTF2A2-202ENST00000396060 KRT28Q7Z3Y7 464 aa15.62■□□□□ 0.09
GTF2A2-202ENST00000396060 KCNH5Q8NCM2 988 aa15.62■□□□□ 0.09
GTF2A2-202ENST00000396060 TRPM3Q9HCF6 1732 aaPredicted RBP15.62■□□□□ 0.09
GTF2A2-202ENST00000396060 ZNF335Q9H4Z2 1342 aaPredicted RBP15.62■□□□□ 0.09
GTF2A2-202ENST00000396060 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
GTF2A2-202ENST00000396060 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
GTF2A2-202ENST00000396060 EIF4A2Q14240 407 aaKnown RBP15.62■□□□□ 0.09
GTF2A2-202ENST00000396060 FKBP8Q14318 412 aa15.61■□□□□ 0.09
GTF2A2-202ENST00000396060 RTL1A6NKG5 1358 aa15.61■□□□□ 0.09
GTF2A2-202ENST00000396060 USP19O94966 1318 aa15.6■□□□□ 0.09
GTF2A2-202ENST00000396060 MAPK8IP3Q9UPT6 1336 aa15.6■□□□□ 0.09
GTF2A2-202ENST00000396060 HSP90AB2PQ58FF8 381 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms