RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 KNDC1Q76NI1 1749 aa19.87■□□□□ 0.77
UBE2D3-207ENST00000394801 WASLO00401 505 aaPredicted RBP19.87■□□□□ 0.77
UBE2D3-207ENST00000394801 IPO9Q96P70 1041 aaKnown RBP19.87■□□□□ 0.77
UBE2D3-207ENST00000394801 MYH16Q9H6N6 1097 aa19.87■□□□□ 0.77
UBE2D3-207ENST00000394801 CPSF1Q10570 1443 aaKnown RBP19.86■□□□□ 0.77
UBE2D3-207ENST00000394801 TMEM2Q9UHN6 1383 aa19.85■□□□□ 0.77
UBE2D3-207ENST00000394801 U2SURPO15042 1029 aaKnown RBP19.85■□□□□ 0.77
UBE2D3-207ENST00000394801 DIAPH1O60610 1272 aaKnown RBP19.85■□□□□ 0.77
UBE2D3-207ENST00000394801 TMPOP42166 694 aaKnown RBP19.84■□□□□ 0.77
UBE2D3-207ENST00000394801 NOP58Q9Y2X3 529 aaKnown RBP19.84■□□□□ 0.77
UBE2D3-207ENST00000394801 CDC42BPGQ6DT37 1551 aa19.83■□□□□ 0.77
UBE2D3-207ENST00000394801 UBR1Q8IWV7 1749 aa19.83■□□□□ 0.77
UBE2D3-207ENST00000394801 CT47B1P0C2W7 299 aaPredicted RBP19.83■□□□□ 0.77
UBE2D3-207ENST00000394801 PNNQ9H307 717 aaKnown RBP19.83■□□□□ 0.77
UBE2D3-207ENST00000394801 AAMPQ13685 434 aa19.83■□□□□ 0.76
UBE2D3-207ENST00000394801 CPS1P31327 1500 aa19.83■□□□□ 0.76
UBE2D3-207ENST00000394801 EDC4Q6P2E9 1401 aaKnown RBP19.82■□□□□ 0.76
UBE2D3-207ENST00000394801 TXNDC2Q86VQ3 553 aa19.81■□□□□ 0.76
UBE2D3-207ENST00000394801 TRIM35Q9UPQ4 493 aa19.81■□□□□ 0.76
UBE2D3-207ENST00000394801 PPIP5K1Q6PFW1 1433 aa19.81■□□□□ 0.76
UBE2D3-207ENST00000394801 IL16Q14005 1332 aa19.81■□□□□ 0.76
UBE2D3-207ENST00000394801 SKAP1Q86WV1 359 aa19.81■□□□□ 0.76
UBE2D3-207ENST00000394801 POLKQ9UBT6 870 aa19.81■□□□□ 0.76
UBE2D3-207ENST00000394801 MAPK8IP3Q9UPT6 1336 aa19.81■□□□□ 0.76
UBE2D3-207ENST00000394801 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
UBE2D3-207ENST00000394801 FCHSD2O94868 740 aa19.79■□□□□ 0.76
UBE2D3-207ENST00000394801 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
UBE2D3-207ENST00000394801 PANK1Q8TE04 598 aa19.79■□□□□ 0.76
UBE2D3-207ENST00000394801 CLUAP1Q96AJ1 413 aa19.79■□□□□ 0.76
UBE2D3-207ENST00000394801 NUDT16Q96DE0 195 aaKnown RBP19.79■□□□□ 0.76
UBE2D3-207ENST00000394801 CCDC61Q9Y6R9 512 aa19.79■□□□□ 0.76
UBE2D3-207ENST00000394801 COG6Q9Y2V7 657 aa19.78■□□□□ 0.76
UBE2D3-207ENST00000394801 ADAMTS13Q76LX8 1427 aa19.78■□□□□ 0.76
UBE2D3-207ENST00000394801 FRAT1Q92837 279 aaPredicted RBP19.77■□□□□ 0.76
UBE2D3-207ENST00000394801 AATKQ6ZMQ8 1374 aa19.76■□□□□ 0.75
UBE2D3-207ENST00000394801 PAK3O75914 559 aaPredicted RBP19.76■□□□□ 0.75
UBE2D3-207ENST00000394801 MAP2P11137 1827 aaKnown RBP19.76■□□□□ 0.75
UBE2D3-207ENST00000394801 MON2Q7Z3U7 1717 aa19.75■□□□□ 0.75
UBE2D3-207ENST00000394801 IGHDP01880 384 aa19.75■□□□□ 0.75
UBE2D3-207ENST00000394801 PLEKHG1Q9ULL1 1385 aa19.75■□□□□ 0.75
UBE2D3-207ENST00000394801 RIPK4P57078 832 aa19.75■□□□□ 0.75
UBE2D3-207ENST00000394801 ZBTB47Q9UFB7 747 aaPredicted RBP19.75■□□□□ 0.75
UBE2D3-207ENST00000394801 ZNF692Q9BU19 519 aaPredicted RBP19.74■□□□□ 0.75
UBE2D3-207ENST00000394801 RSPH6AQ9H0K4 717 aa19.74■□□□□ 0.75
UBE2D3-207ENST00000394801 RLBP1P12271 317 aa19.73■□□□□ 0.75
UBE2D3-207ENST00000394801 ROBO2Q9HCK4 1378 aa19.73■□□□□ 0.75
UBE2D3-207ENST00000394801 AKAP12Q02952 1782 aa19.72■□□□□ 0.75
UBE2D3-207ENST00000394801 TSR2Q969E8 191 aaKnown RBP19.72■□□□□ 0.75
UBE2D3-207ENST00000394801 LRRC7Q96NW7 1537 aa19.72■□□□□ 0.75
UBE2D3-207ENST00000394801 FBLN1P23142 703 aa19.72■□□□□ 0.75
UBE2D3-207ENST00000394801 LTKP29376 864 aa19.72■□□□□ 0.75
UBE2D3-207ENST00000394801 FAM161AQ3B820 660 aa19.72■□□□□ 0.75
UBE2D3-207ENST00000394801 NME9Q86XW9 330 aa19.72■□□□□ 0.75
UBE2D3-207ENST00000394801 CDK12Q9NYV4 1490 aaPredicted RBP19.72■□□□□ 0.75
UBE2D3-207ENST00000394801 EXOSC9Q06265 439 aaKnown RBP19.71■□□□□ 0.75
UBE2D3-207ENST00000394801 PRR36Q9H6K5 1346 aa19.71■□□□□ 0.75
UBE2D3-207ENST00000394801 BCL2L13Q9BXK5 485 aa19.71■□□□□ 0.75
UBE2D3-207ENST00000394801 C3P01024 1663 aa19.7■□□□□ 0.74
UBE2D3-207ENST00000394801 IL13P35225 146 aa19.7■□□□□ 0.74
UBE2D3-207ENST00000394801 C8orf34Q49A92 452 aa19.7■□□□□ 0.74
UBE2D3-207ENST00000394801 ZKSCAN2Q63HK3 967 aa19.7■□□□□ 0.74
UBE2D3-207ENST00000394801 PMFBP1Q8TBY8 1022 aa19.7■□□□□ 0.74
UBE2D3-207ENST00000394801 TNNQ9UQP3 1299 aa19.7■□□□□ 0.74
UBE2D3-207ENST00000394801 NCKAP5LQ9HCH0 1330 aa19.69■□□□□ 0.74
UBE2D3-207ENST00000394801 NPM2Q86SE8 214 aaKnown RBP19.69■□□□□ 0.74
UBE2D3-207ENST00000394801 COG3Q96JB2 828 aa19.69■□□□□ 0.74
UBE2D3-207ENST00000394801 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
UBE2D3-207ENST00000394801 PRKAR2BP31323 418 aa19.69■□□□□ 0.74
UBE2D3-207ENST00000394801 EMILIN1Q9Y6C2 1016 aa19.69■□□□□ 0.74
UBE2D3-207ENST00000394801 ITSN1Q15811 1721 aa19.68■□□□□ 0.74
UBE2D3-207ENST00000394801 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.68■□□□□ 0.74
UBE2D3-207ENST00000394801 NEFMP07197 916 aa19.67■□□□□ 0.74
UBE2D3-207ENST00000394801 MVPQ14764 893 aaKnown RBP19.67■□□□□ 0.74
UBE2D3-207ENST00000394801 ZRANB1Q9UGI0 708 aa19.67■□□□□ 0.74
UBE2D3-207ENST00000394801 SLIT1O75093 1534 aa19.67■□□□□ 0.74
UBE2D3-207ENST00000394801 PCDHB15Q9Y5E8 787 aa19.66■□□□□ 0.74
UBE2D3-207ENST00000394801 ARHGAP23Q9P227 1491 aa19.66■□□□□ 0.74
UBE2D3-207ENST00000394801 PLEKHG3A1L390 1219 aa19.66■□□□□ 0.74
UBE2D3-207ENST00000394801 RGS3P49796 1198 aa19.66■□□□□ 0.74
UBE2D3-207ENST00000394801 DZIP1LQ8IYY4 767 aaKnown RBP19.66■□□□□ 0.74
UBE2D3-207ENST00000394801 NFE2L2Q16236 605 aa19.65■□□□□ 0.74
UBE2D3-207ENST00000394801 SSH1Q8WYL5 1049 aa19.65■□□□□ 0.74
UBE2D3-207ENST00000394801 CEBPAP49715 358 aaPredicted RBP19.65■□□□□ 0.74
UBE2D3-207ENST00000394801 SMC4Q9NTJ3 1288 aa19.65■□□□□ 0.74
UBE2D3-207ENST00000394801 TOPAZ1Q8N9V7 1692 aa19.65■□□□□ 0.74
UBE2D3-207ENST00000394801 PHACTR3Q96KR7 559 aa19.64■□□□□ 0.74
UBE2D3-207ENST00000394801 EID1Q9Y6B2 187 aa19.64■□□□□ 0.74
UBE2D3-207ENST00000394801 PTPRUQ92729 1446 aa19.64■□□□□ 0.73
UBE2D3-207ENST00000394801 ZNF428Q96B54 188 aa19.63■□□□□ 0.73
UBE2D3-207ENST00000394801 ALDH1L2Q3SY69 923 aa19.63■□□□□ 0.73
UBE2D3-207ENST00000394801 TBX22Q9Y458 520 aa19.63■□□□□ 0.73
UBE2D3-207ENST00000394801 NRKQ7Z2Y5 1582 aa19.63■□□□□ 0.73
UBE2D3-207ENST00000394801 HMOX1P09601 288 aa19.62■□□□□ 0.73
UBE2D3-207ENST00000394801 ATF7IPQ6VMQ6 1270 aa19.62■□□□□ 0.73
UBE2D3-207ENST00000394801 DDRGK1Q96HY6 314 aa19.62■□□□□ 0.73
UBE2D3-207ENST00000394801 TRIM27P14373 513 aa19.62■□□□□ 0.73
UBE2D3-207ENST00000394801 BRPF1P55201 1214 aaPredicted RBP19.62■□□□□ 0.73
UBE2D3-207ENST00000394801 CALD1Q05682 793 aaKnown RBP19.62■□□□□ 0.73
UBE2D3-207ENST00000394801 FTSJ3Q8IY81 847 aaKnown RBP19.62■□□□□ 0.73
UBE2D3-207ENST00000394801 TTC21BQ7Z4L5 1316 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms