RNA–Protein interactions for RNA: ENST00000394086.7

RARA-203, Transcript of retinoic acid receptor alpha, humanhuman

TSL 2 BASIC

Gene RARA, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-203ENST00000394086 FOXO3O43524 673 aa30.65■■■□□ 2.5
RARA-203ENST00000394086 RGPD8O14715 1765 aaPredicted RBP30.65■■■□□ 2.5
RARA-203ENST00000394086 PMFBP1Q8TBY8 1022 aa30.64■■■□□ 2.5
RARA-203ENST00000394086 TESK2Q96S53 571 aa30.64■■■□□ 2.5
RARA-203ENST00000394086 USP32Q8NFA0 1604 aa30.64■■■□□ 2.5
RARA-203ENST00000394086 NLRP13Q86W25 1043 aa30.64■■■□□ 2.5
RARA-203ENST00000394086 POLR3GLQ9BT43 218 aa30.63■■■□□ 2.49
RARA-203ENST00000394086 ATP7BP35670 1465 aa30.61■■■□□ 2.49
RARA-203ENST00000394086 MS4A1P11836 297 aa30.61■■■□□ 2.49
RARA-203ENST00000394086 CCDC61Q9Y6R9 512 aa30.61■■■□□ 2.49
RARA-203ENST00000394086 AHDC1Q5TGY3 1603 aaPredicted RBP30.59■■■□□ 2.49
RARA-203ENST00000394086 PHLPP1O60346 1717 aa30.59■■■□□ 2.49
RARA-203ENST00000394086 PAK3O75914 559 aaPredicted RBP30.59■■■□□ 2.49
RARA-203ENST00000394086 XPCQ01831 940 aaPredicted RBP30.59■■■□□ 2.49
RARA-203ENST00000394086 NPHP3Q7Z494 1330 aa30.58■■■□□ 2.49
RARA-203ENST00000394086 SLC24A1O60721 1099 aa30.57■■■□□ 2.48
RARA-203ENST00000394086 RTL5Q5HYW3 569 aaPredicted RBP30.56■■■□□ 2.48
RARA-203ENST00000394086 RCAN3Q9UKA8 241 aa30.56■■■□□ 2.48
RARA-203ENST00000394086 NHSL1Q5SYE7 1610 aa30.56■■■□□ 2.48
RARA-203ENST00000394086 NGDNQ8NEJ9 315 aaKnown RBP30.55■■■□□ 2.48
RARA-203ENST00000394086 KIF1AQ12756 1690 aa30.54■■■□□ 2.48
RARA-203ENST00000394086 PSME1Q06323 249 aa30.54■■■□□ 2.48
RARA-203ENST00000394086 SOS2Q07890 1332 aaPredicted RBP30.54■■■□□ 2.48
RARA-203ENST00000394086 TMF1P82094 1093 aa30.53■■■□□ 2.48
RARA-203ENST00000394086 CABP1Q9NZU7 370 aa30.52■■■□□ 2.48
RARA-203ENST00000394086 COL16A1Q07092 1604 aaPredicted RBP30.52■■■□□ 2.48
RARA-203ENST00000394086 KRT28Q7Z3Y7 464 aa30.52■■■□□ 2.48
RARA-203ENST00000394086 PPIP5K1Q6PFW1 1433 aa30.52■■■□□ 2.48
RARA-203ENST00000394086 LRRC59Q96AG4 307 aaKnown RBP30.51■■■□□ 2.47
RARA-203ENST00000394086 PLEKHG3A1L390 1219 aa30.51■■■□□ 2.47
RARA-203ENST00000394086 BLMP54132 1417 aaPredicted RBP30.51■■■□□ 2.47
RARA-203ENST00000394086 ITSN1Q15811 1721 aa30.5■■■□□ 2.47
RARA-203ENST00000394086 ATAD2Q6PL18 1390 aa30.49■■■□□ 2.47
RARA-203ENST00000394086 DISP3Q9P2K9 1392 aa30.49■■■□□ 2.47
RARA-203ENST00000394086 USP35Q9P2H5 1018 aa30.49■■■□□ 2.47
RARA-203ENST00000394086 ACEP12821 1306 aa30.48■■■□□ 2.47
RARA-203ENST00000394086 PXDNQ92626 1479 aa30.47■■■□□ 2.47
RARA-203ENST00000394086 TOPAZ1Q8N9V7 1692 aa30.47■■■□□ 2.47
RARA-203ENST00000394086 PUS7Q96PZ0 661 aaKnown RBP30.46■■■□□ 2.47
RARA-203ENST00000394086 JCADQ9P266 1359 aa30.45■■■□□ 2.47
RARA-203ENST00000394086 NBR1Q14596 966 aa30.44■■■□□ 2.46
RARA-203ENST00000394086 POLR3AO14802 1390 aaPredicted RBP30.43■■■□□ 2.46
RARA-203ENST00000394086 CDCA8Q53HL2 280 aa30.42■■■□□ 2.46
RARA-203ENST00000394086 PER1O15534 1290 aaPredicted RBP30.42■■■□□ 2.46
RARA-203ENST00000394086 EXOC6Q8TAG9 804 aa30.41■■■□□ 2.46
RARA-203ENST00000394086 SLC12A5Q9H2X9 1139 aa30.4■■■□□ 2.46
RARA-203ENST00000394086 BACH2Q9BYV9 841 aa30.4■■■□□ 2.46
RARA-203ENST00000394086 LMOD2Q6P5Q4 547 aa30.39■■■□□ 2.46
RARA-203ENST00000394086 SPATA31A3Q5VYP0 1347 aa30.39■■■□□ 2.46
RARA-203ENST00000394086 PDE4AP27815 886 aa30.38■■■□□ 2.45
RARA-203ENST00000394086 CNGB1Q14028 1251 aaPredicted RBP30.38■■■□□ 2.45
RARA-203ENST00000394086 SBNO1A3KN83 1393 aa30.37■■■□□ 2.45
RARA-203ENST00000394086 PNPLA6Q8IY17 1366 aa30.37■■■□□ 2.45
RARA-203ENST00000394086 TNS3Q68CZ2 1445 aa30.34■■■□□ 2.45
RARA-203ENST00000394086 PPM1GO15355 546 aaPredicted RBP30.34■■■□□ 2.45
RARA-203ENST00000394086 ZNF692Q9BU19 519 aaPredicted RBP30.34■■■□□ 2.45
RARA-203ENST00000394086 DDRGK1Q96HY6 314 aa30.33■■■□□ 2.45
RARA-203ENST00000394086 NUTM2BA6NNL0 878 aaPredicted RBP30.32■■■□□ 2.44
RARA-203ENST00000394086 NUTM2EB1AL46 878 aaPredicted RBP30.32■■■□□ 2.44
RARA-203ENST00000394086 PLEKHG5O94827 1062 aa30.32■■■□□ 2.44
RARA-203ENST00000394086 NUTM2AQ8IVF1 878 aaPredicted RBP30.32■■■□□ 2.44
RARA-203ENST00000394086 SPATA31A6Q5VVP1 1343 aa30.32■■■□□ 2.44
RARA-203ENST00000394086 SHPRHQ149N8 1683 aa30.31■■■□□ 2.44
RARA-203ENST00000394086 HDGFL2Q7Z4V5 671 aaPredicted RBP30.3■■■□□ 2.44
RARA-203ENST00000394086 TERF2IPQ9NYB0 399 aa30.3■■■□□ 2.44
RARA-203ENST00000394086 USP6P35125 1406 aa30.3■■■□□ 2.44
RARA-203ENST00000394086 CPSF1Q10570 1443 aaKnown RBP30.3■■■□□ 2.44
RARA-203ENST00000394086 NINLQ9Y2I6 1382 aa30.3■■■□□ 2.44
RARA-203ENST00000394086 TRPM3Q9HCF6 1732 aaPredicted RBP30.29■■■□□ 2.44
RARA-203ENST00000394086 ARHGEF10O15013 1369 aa30.28■■■□□ 2.44
RARA-203ENST00000394086 CD163L1Q9NR16 1453 aa30.27■■■□□ 2.44
RARA-203ENST00000394086 NUTM2GQ5VZR2 741 aa30.25■■■□□ 2.43
RARA-203ENST00000394086 ABTB2Q8N961 1025 aa30.25■■■□□ 2.43
RARA-203ENST00000394086 A0A1W2PP64 1363 aa30.25■■■□□ 2.43
RARA-203ENST00000394086 CABLES1Q8TDN4 633 aa30.24■■■□□ 2.43
RARA-203ENST00000394086 AKAP12Q02952 1782 aa30.23■■■□□ 2.43
RARA-203ENST00000394086 TTC21BQ7Z4L5 1316 aa30.22■■■□□ 2.43
RARA-203ENST00000394086 SSH2Q76I76 1423 aa30.22■■■□□ 2.43
RARA-203ENST00000394086 MEX3CQ5U5Q3 659 aaKnown RBP30.21■■■□□ 2.43
RARA-203ENST00000394086 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.21■■■□□ 2.43
RARA-203ENST00000394086 ALS2Q96Q42 1657 aa30.21■■■□□ 2.43
RARA-203ENST00000394086 LRP6O75581 1613 aa30.2■■■□□ 2.43
RARA-203ENST00000394086 COL22A1Q8NFW1 1626 aaPredicted RBP30.2■■■□□ 2.43
RARA-203ENST00000394086 HAP1P54257 671 aaPredicted RBP30.2■■■□□ 2.43
RARA-203ENST00000394086 ADAMTS2O95450 1211 aa30.2■■■□□ 2.42
RARA-203ENST00000394086 ANKRD36BQ8N2N9 1353 aa30.2■■■□□ 2.42
RARA-203ENST00000394086 ANO8Q9HCE9 1232 aaPredicted RBP30.19■■■□□ 2.42
RARA-203ENST00000394086 MED1Q15648 1581 aaPredicted RBP30.18■■■□□ 2.42
RARA-203ENST00000394086 TTC21AQ8NDW8 1320 aa30.17■■■□□ 2.42
RARA-203ENST00000394086 NLRP6P59044 892 aa30.17■■■□□ 2.42
RARA-203ENST00000394086 MON2Q7Z3U7 1717 aa30.16■■■□□ 2.42
RARA-203ENST00000394086 EDC4Q6P2E9 1401 aaKnown RBP30.15■■■□□ 2.42
RARA-203ENST00000394086 CDCA7LQ96GN5 454 aa30.15■■■□□ 2.42
RARA-203ENST00000394086 MYOM1P52179 1685 aa30.15■■■□□ 2.42
RARA-203ENST00000394086 PANK3Q9H999 370 aa30.14■■■□□ 2.42
RARA-203ENST00000394086 NPM2Q86SE8 214 aaKnown RBP30.13■■■□□ 2.41
RARA-203ENST00000394086 CENPQQ7L2Z9 268 aaPredicted RBP30.12■■■□□ 2.41
RARA-203ENST00000394086 NME9Q86XW9 330 aa30.12■■■□□ 2.41
RARA-203ENST00000394086 NRKQ7Z2Y5 1582 aa30.12■■■□□ 2.41
RARA-203ENST00000394086 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms