RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 U2AF1Q01081 240 aaKnown RBP eCLIP23.14■■□□□ 1.3
RUFY1-203ENST00000393448 ACEP12821 1306 aa23.14■■□□□ 1.29
RUFY1-203ENST00000393448 COL3A1P02461 1466 aaPredicted RBP23.14■■□□□ 1.29
RUFY1-203ENST00000393448 RRP7AQ9Y3A4 280 aaKnown RBP23.13■■□□□ 1.29
RUFY1-203ENST00000393448 RGPD8O14715 1765 aaPredicted RBP23.13■■□□□ 1.29
RUFY1-203ENST00000393448 PPM1GO15355 546 aaPredicted RBP23.13■■□□□ 1.29
RUFY1-203ENST00000393448 GOLGA2Q08379 1002 aa23.13■■□□□ 1.29
RUFY1-203ENST00000393448 NEUROD2Q15784 382 aa23.13■■□□□ 1.29
RUFY1-203ENST00000393448 RBM33Q96EV2 1170 aaKnown RBP23.13■■□□□ 1.29
RUFY1-203ENST00000393448 U2SURPO15042 1029 aaKnown RBP23.11■■□□□ 1.29
RUFY1-203ENST00000393448 RUNDC1Q96C34 613 aa23.11■■□□□ 1.29
RUFY1-203ENST00000393448 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
RUFY1-203ENST00000393448 DMRT2Q9Y5R5 561 aa23.11■■□□□ 1.29
RUFY1-203ENST00000393448 PIK3R4Q99570 1358 aa23.11■■□□□ 1.29
RUFY1-203ENST00000393448 MAP2P11137 1827 aaKnown RBP23.11■■□□□ 1.29
RUFY1-203ENST00000393448 PMFBP1Q8TBY8 1022 aa23.11■■□□□ 1.29
RUFY1-203ENST00000393448 ZNF692Q9BU19 519 aaPredicted RBP23.11■■□□□ 1.29
RUFY1-203ENST00000393448 POLKQ9UBT6 870 aa23.1■■□□□ 1.29
RUFY1-203ENST00000393448 DUSP27Q5VZP5 1158 aa23.1■■□□□ 1.29
RUFY1-203ENST00000393448 TCP11L2Q8N4U5 519 aa23.1■■□□□ 1.29
RUFY1-203ENST00000393448 CHD2O14647 1828 aaKnown RBP23.09■■□□□ 1.29
RUFY1-203ENST00000393448 PLEKHG3A1L390 1219 aa23.09■■□□□ 1.29
RUFY1-203ENST00000393448 EMILIN1Q9Y6C2 1016 aa23.08■■□□□ 1.29
RUFY1-203ENST00000393448 SLFN5Q08AF3 891 aa23.08■■□□□ 1.28
RUFY1-203ENST00000393448 ERICH6BQ5W0A0 696 aa23.08■■□□□ 1.28
RUFY1-203ENST00000393448 COG3Q96JB2 828 aa23.08■■□□□ 1.28
RUFY1-203ENST00000393448 IQSEC2Q5JU85 1478 aa23.07■■□□□ 1.28
RUFY1-203ENST00000393448 RRP1P56182 461 aaKnown RBP23.07■■□□□ 1.28
RUFY1-203ENST00000393448 NRKQ7Z2Y5 1582 aa23.07■■□□□ 1.28
RUFY1-203ENST00000393448 PNPLA6Q8IY17 1366 aa23.07■■□□□ 1.28
RUFY1-203ENST00000393448 TTC21BQ7Z4L5 1316 aa23.07■■□□□ 1.28
RUFY1-203ENST00000393448 DIAPH1O60610 1272 aaKnown RBP23.06■■□□□ 1.28
RUFY1-203ENST00000393448 WWC1Q8IX03 1113 aa23.06■■□□□ 1.28
RUFY1-203ENST00000393448 PPP4R2Q9NY27 417 aa23.06■■□□□ 1.28
RUFY1-203ENST00000393448 NPHP4O75161 1426 aaPredicted RBP23.05■■□□□ 1.28
RUFY1-203ENST00000393448 USP6P35125 1406 aa23.05■■□□□ 1.28
RUFY1-203ENST00000393448 RRS1Q15050 365 aaKnown RBP23.04■■□□□ 1.28
RUFY1-203ENST00000393448 B4GALNT3Q6L9W6 998 aa23.03■■□□□ 1.28
RUFY1-203ENST00000393448 NALCNQ8IZF0 1738 aa23.02■■□□□ 1.28
RUFY1-203ENST00000393448 PLIN1O60240 522 aa23.02■■□□□ 1.28
RUFY1-203ENST00000393448 TRMT2AQ8IZ69 625 aaKnown RBP23.02■■□□□ 1.28
RUFY1-203ENST00000393448 NGDNQ8NEJ9 315 aaKnown RBP23.02■■□□□ 1.28
RUFY1-203ENST00000393448 NGEFQ8N5V2 710 aa23■■□□□ 1.27
RUFY1-203ENST00000393448 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
RUFY1-203ENST00000393448 FMN2Q9NZ56 1722 aa23■■□□□ 1.27
RUFY1-203ENST00000393448 E9PSI1 815 aa22.99■■□□□ 1.27
RUFY1-203ENST00000393448 AATKQ6ZMQ8 1374 aa22.98■■□□□ 1.27
RUFY1-203ENST00000393448 SSH2Q76I76 1423 aa22.98■■□□□ 1.27
RUFY1-203ENST00000393448 SOX12O15370 315 aa22.97■■□□□ 1.27
RUFY1-203ENST00000393448 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
RUFY1-203ENST00000393448 OVOS2A0A0J9YW53 1432 aa22.97■■□□□ 1.27
RUFY1-203ENST00000393448 OVOS2Q6IE36 1432 aa22.97■■□□□ 1.27
RUFY1-203ENST00000393448 ANKARQ7Z5J8 1434 aa22.95■■□□□ 1.26
RUFY1-203ENST00000393448 CDK12Q9NYV4 1490 aaPredicted RBP22.95■■□□□ 1.26
RUFY1-203ENST00000393448 HMOX1P09601 288 aa22.94■■□□□ 1.26
RUFY1-203ENST00000393448 EXOC6Q8TAG9 804 aa22.94■■□□□ 1.26
RUFY1-203ENST00000393448 MAPK8IP3Q9UPT6 1336 aa22.94■■□□□ 1.26
RUFY1-203ENST00000393448 LRRC7Q96NW7 1537 aa22.93■■□□□ 1.26
RUFY1-203ENST00000393448 IL13P35225 146 aa22.93■■□□□ 1.26
RUFY1-203ENST00000393448 TMPOP42166 694 aaKnown RBP22.92■■□□□ 1.26
RUFY1-203ENST00000393448 CCDC27Q2M243 656 aa22.92■■□□□ 1.26
RUFY1-203ENST00000393448 C14orf37Q86TY3 774 aa22.92■■□□□ 1.26
RUFY1-203ENST00000393448 PRKAR2BP31323 418 aa22.91■■□□□ 1.26
RUFY1-203ENST00000393448 RSPH6AQ9H0K4 717 aa22.91■■□□□ 1.26
RUFY1-203ENST00000393448 ADGRL3Q9HAR2 1447 aa22.9■■□□□ 1.26
RUFY1-203ENST00000393448 TTC21AQ8NDW8 1320 aa22.9■■□□□ 1.26
RUFY1-203ENST00000393448 FCHSD2O94868 740 aa22.9■■□□□ 1.26
RUFY1-203ENST00000393448 C20orf194Q5TEA3 1177 aa22.9■■□□□ 1.26
RUFY1-203ENST00000393448 NUTM2GQ5VZR2 741 aa22.9■■□□□ 1.26
RUFY1-203ENST00000393448 WDR63Q8IWG1 891 aa22.9■■□□□ 1.26
RUFY1-203ENST00000393448 PIK3C2AO00443 1686 aa22.89■■□□□ 1.26
RUFY1-203ENST00000393448 HSPA2P54652 639 aa22.89■■□□□ 1.25
RUFY1-203ENST00000393448 TRIM35Q9UPQ4 493 aa22.89■■□□□ 1.25
RUFY1-203ENST00000393448 PHACTR3Q96KR7 559 aa22.87■■□□□ 1.25
RUFY1-203ENST00000393448 PHF8Q9UPP1 1060 aa22.87■■□□□ 1.25
RUFY1-203ENST00000393448 PEAK1Q9H792 1746 aa22.87■■□□□ 1.25
RUFY1-203ENST00000393448 USP31Q70CQ4 1352 aa22.87■■□□□ 1.25
RUFY1-203ENST00000393448 RIPK4P57078 832 aa22.87■■□□□ 1.25
RUFY1-203ENST00000393448 CCDC136Q96JN2 1154 aa22.87■■□□□ 1.25
RUFY1-203ENST00000393448 BCAR3O75815 825 aa22.86■■□□□ 1.25
RUFY1-203ENST00000393448 PAK3O75914 559 aaPredicted RBP22.86■■□□□ 1.25
RUFY1-203ENST00000393448 ESCO1Q5FWF5 840 aa22.86■■□□□ 1.25
RUFY1-203ENST00000393448 NWD1Q149M9 1564 aa22.85■■□□□ 1.25
RUFY1-203ENST00000393448 HSP90AB2PQ58FF8 381 aa22.85■■□□□ 1.25
RUFY1-203ENST00000393448 PNNQ9H307 717 aaKnown RBP22.85■■□□□ 1.25
RUFY1-203ENST00000393448 NLRP6P59044 892 aa22.85■■□□□ 1.25
RUFY1-203ENST00000393448 PROSER2Q86WR7 435 aaPredicted RBP22.85■■□□□ 1.25
RUFY1-203ENST00000393448 CRBNQ96SW2 442 aa22.85■■□□□ 1.25
RUFY1-203ENST00000393448 EIF4A2Q14240 407 aaKnown RBP22.84■■□□□ 1.25
RUFY1-203ENST00000393448 NCBP3Q53F19 620 aaKnown RBP22.84■■□□□ 1.25
RUFY1-203ENST00000393448 TSHZ2Q9NRE2 1034 aa22.84■■□□□ 1.25
RUFY1-203ENST00000393448 MAP3K19Q56UN5 1328 aa22.83■■□□□ 1.24
RUFY1-203ENST00000393448 ABTB2Q8N961 1025 aa22.82■■□□□ 1.24
RUFY1-203ENST00000393448 TSR2Q969E8 191 aaKnown RBP22.82■■□□□ 1.24
RUFY1-203ENST00000393448 KDM4FA0A1W2PPD8 638 aa22.81■■□□□ 1.24
RUFY1-203ENST00000393448 MARF1Q9Y4F3 1742 aaKnown RBP22.81■■□□□ 1.24
RUFY1-203ENST00000393448 AEBP1Q8IUX7 1158 aa22.81■■□□□ 1.24
RUFY1-203ENST00000393448 ORAI2Q96SN7 254 aa22.81■■□□□ 1.24
RUFY1-203ENST00000393448 NEFMP07197 916 aa22.8■■□□□ 1.24
RUFY1-203ENST00000393448 MYH16Q9H6N6 1097 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms