RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 PPP4R2Q9NY27 417 aa26.71■■□□□ 1.87
ME3-202ENST00000393324 TOPAZ1Q8N9V7 1692 aa26.71■■□□□ 1.87
ME3-202ENST00000393324 NME9Q86XW9 330 aa26.7■■□□□ 1.87
ME3-202ENST00000393324 U2AF1L5P0DN76 240 aaPredicted RBP26.7■■□□□ 1.86
ME3-202ENST00000393324 KCNA6P17658 529 aa26.7■■□□□ 1.86
ME3-202ENST00000393324 U2AF1Q01081 240 aaKnown RBP eCLIP26.7■■□□□ 1.86
ME3-202ENST00000393324 COL3A1P02461 1466 aaPredicted RBP26.69■■□□□ 1.86
ME3-202ENST00000393324 DUSP27Q5VZP5 1158 aa26.69■■□□□ 1.86
ME3-202ENST00000393324 PLEKHG3A1L390 1219 aa26.68■■□□□ 1.86
ME3-202ENST00000393324 RRP1P56182 461 aaKnown RBP26.67■■□□□ 1.86
ME3-202ENST00000393324 ACEP12821 1306 aa26.67■■□□□ 1.86
ME3-202ENST00000393324 SLFN5Q08AF3 891 aa26.66■■□□□ 1.86
ME3-202ENST00000393324 MAP2P11137 1827 aaKnown RBP26.66■■□□□ 1.86
ME3-202ENST00000393324 PNPLA6Q8IY17 1366 aa26.66■■□□□ 1.86
ME3-202ENST00000393324 FBLN1P23142 703 aa26.65■■□□□ 1.86
ME3-202ENST00000393324 TCP11L2Q8N4U5 519 aa26.65■■□□□ 1.86
ME3-202ENST00000393324 ZRANB1Q9UGI0 708 aa26.65■■□□□ 1.86
ME3-202ENST00000393324 POLKQ9UBT6 870 aa26.65■■□□□ 1.86
ME3-202ENST00000393324 U2SURPO15042 1029 aaKnown RBP26.64■■□□□ 1.86
ME3-202ENST00000393324 COG3Q96JB2 828 aa26.64■■□□□ 1.86
ME3-202ENST00000393324 CHD2O14647 1828 aaKnown RBP26.64■■□□□ 1.85
ME3-202ENST00000393324 NKTRP30414 1462 aaKnown RBP26.63■■□□□ 1.85
ME3-202ENST00000393324 IQSEC2Q5JU85 1478 aa26.63■■□□□ 1.85
ME3-202ENST00000393324 DIAPH1O60610 1272 aaKnown RBP26.62■■□□□ 1.85
ME3-202ENST00000393324 WWC1Q8IX03 1113 aa26.62■■□□□ 1.85
ME3-202ENST00000393324 TRMT2AQ8IZ69 625 aaKnown RBP26.62■■□□□ 1.85
ME3-202ENST00000393324 PPM1GO15355 546 aaPredicted RBP26.62■■□□□ 1.85
ME3-202ENST00000393324 NEUROD2Q15784 382 aa26.62■■□□□ 1.85
ME3-202ENST00000393324 SPINK5Q9NQ38 1064 aaPredicted RBP26.61■■□□□ 1.85
ME3-202ENST00000393324 RRP7AQ9Y3A4 280 aaKnown RBP26.61■■□□□ 1.85
ME3-202ENST00000393324 RGPD8O14715 1765 aaPredicted RBP26.61■■□□□ 1.85
ME3-202ENST00000393324 E9PSI1 815 aa26.6■■□□□ 1.85
ME3-202ENST00000393324 TTC21BQ7Z4L5 1316 aa26.6■■□□□ 1.85
ME3-202ENST00000393324 NRKQ7Z2Y5 1582 aa26.6■■□□□ 1.85
ME3-202ENST00000393324 USP6P35125 1406 aa26.59■■□□□ 1.85
ME3-202ENST00000393324 DMRT2Q9Y5R5 561 aa26.59■■□□□ 1.85
ME3-202ENST00000393324 AATKQ6ZMQ8 1374 aa26.58■■□□□ 1.85
ME3-202ENST00000393324 PMFBP1Q8TBY8 1022 aa26.58■■□□□ 1.85
ME3-202ENST00000393324 B4GALNT3Q6L9W6 998 aa26.57■■□□□ 1.84
ME3-202ENST00000393324 ANP32EQ9BTT0 268 aa26.57■■□□□ 1.84
ME3-202ENST00000393324 EMILIN1Q9Y6C2 1016 aa26.57■■□□□ 1.84
ME3-202ENST00000393324 NPHP4O75161 1426 aaPredicted RBP26.56■■□□□ 1.84
ME3-202ENST00000393324 PHF23Q9BUL5 403 aaPredicted RBP26.56■■□□□ 1.84
ME3-202ENST00000393324 PLEKHF1Q96S99 279 aa26.55■■□□□ 1.84
ME3-202ENST00000393324 CCDC27Q2M243 656 aa26.54■■□□□ 1.84
ME3-202ENST00000393324 NCBP3Q53F19 620 aaKnown RBP26.54■■□□□ 1.84
ME3-202ENST00000393324 ANKARQ7Z5J8 1434 aa26.53■■□□□ 1.84
ME3-202ENST00000393324 NGDNQ8NEJ9 315 aaKnown RBP26.53■■□□□ 1.84
ME3-202ENST00000393324 SSH2Q76I76 1423 aa26.52■■□□□ 1.84
ME3-202ENST00000393324 FMN2Q9NZ56 1722 aa26.52■■□□□ 1.84
ME3-202ENST00000393324 CDK12Q9NYV4 1490 aaPredicted RBP26.52■■□□□ 1.84
ME3-202ENST00000393324 RRS1Q15050 365 aaKnown RBP26.51■■□□□ 1.84
ME3-202ENST00000393324 WDR63Q8IWG1 891 aa26.51■■□□□ 1.83
ME3-202ENST00000393324 MAPK8IP3Q9UPT6 1336 aa26.51■■□□□ 1.83
ME3-202ENST00000393324 PLIN1O60240 522 aa26.5■■□□□ 1.83
ME3-202ENST00000393324 PNNQ9H307 717 aaKnown RBP26.5■■□□□ 1.83
ME3-202ENST00000393324 NALCNQ8IZF0 1738 aa26.5■■□□□ 1.83
ME3-202ENST00000393324 OVOS2A0A0J9YW53 1432 aa26.5■■□□□ 1.83
ME3-202ENST00000393324 OVOS2Q6IE36 1432 aa26.5■■□□□ 1.83
ME3-202ENST00000393324 TTC21AQ8NDW8 1320 aa26.48■■□□□ 1.83
ME3-202ENST00000393324 FCHSD2O94868 740 aa26.48■■□□□ 1.83
ME3-202ENST00000393324 RBM33Q96EV2 1170 aaKnown RBP26.48■■□□□ 1.83
ME3-202ENST00000393324 TMPOP42166 694 aaKnown RBP26.47■■□□□ 1.83
ME3-202ENST00000393324 IL13P35225 146 aa26.46■■□□□ 1.83
ME3-202ENST00000393324 EXOC6Q8TAG9 804 aa26.46■■□□□ 1.83
ME3-202ENST00000393324 CCDC136Q96JN2 1154 aa26.45■■□□□ 1.82
ME3-202ENST00000393324 RSPH6AQ9H0K4 717 aa26.44■■□□□ 1.82
ME3-202ENST00000393324 LRRC7Q96NW7 1537 aa26.44■■□□□ 1.82
ME3-202ENST00000393324 USP31Q70CQ4 1352 aa26.42■■□□□ 1.82
ME3-202ENST00000393324 ADGRL3Q9HAR2 1447 aa26.42■■□□□ 1.82
ME3-202ENST00000393324 PRKAR2BP31323 418 aa26.42■■□□□ 1.82
ME3-202ENST00000393324 HMOX1P09601 288 aa26.41■■□□□ 1.82
ME3-202ENST00000393324 TRIM35Q9UPQ4 493 aa26.41■■□□□ 1.82
ME3-202ENST00000393324 NEFMP07197 916 aa26.39■■□□□ 1.82
ME3-202ENST00000393324 RIPK4P57078 832 aa26.39■■□□□ 1.82
ME3-202ENST00000393324 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.39■■□□□ 1.82
ME3-202ENST00000393324 C14orf37Q86TY3 774 aa26.38■■□□□ 1.81
ME3-202ENST00000393324 MYH16Q9H6N6 1097 aa26.38■■□□□ 1.81
ME3-202ENST00000393324 PIK3C2AO00443 1686 aa26.38■■□□□ 1.81
ME3-202ENST00000393324 SOX12O15370 315 aa26.37■■□□□ 1.81
ME3-202ENST00000393324 PHF8Q9UPP1 1060 aa26.37■■□□□ 1.81
ME3-202ENST00000393324 NWD1Q149M9 1564 aa26.37■■□□□ 1.81
ME3-202ENST00000393324 C20orf194Q5TEA3 1177 aa26.37■■□□□ 1.81
ME3-202ENST00000393324 CRBNQ96SW2 442 aa26.36■■□□□ 1.81
ME3-202ENST00000393324 BCAR3O75815 825 aa26.35■■□□□ 1.81
ME3-202ENST00000393324 PHACTR3Q96KR7 559 aa26.34■■□□□ 1.81
ME3-202ENST00000393324 PEAK1Q9H792 1746 aa26.34■■□□□ 1.81
ME3-202ENST00000393324 NLRP6P59044 892 aa26.33■■□□□ 1.81
ME3-202ENST00000393324 EIF4A2Q14240 407 aaKnown RBP26.33■■□□□ 1.81
ME3-202ENST00000393324 PAK3O75914 559 aaPredicted RBP26.31■■□□□ 1.8
ME3-202ENST00000393324 HSP90AB2PQ58FF8 381 aa26.31■■□□□ 1.8
ME3-202ENST00000393324 ESCO1Q5FWF5 840 aa26.31■■□□□ 1.8
ME3-202ENST00000393324 PROSER2Q86WR7 435 aaPredicted RBP26.31■■□□□ 1.8
ME3-202ENST00000393324 MAP3K19Q56UN5 1328 aa26.31■■□□□ 1.8
ME3-202ENST00000393324 IL16Q14005 1332 aa26.3■■□□□ 1.8
ME3-202ENST00000393324 NFE2L2Q16236 605 aa26.3■■□□□ 1.8
ME3-202ENST00000393324 ABTB2Q8N961 1025 aa26.3■■□□□ 1.8
ME3-202ENST00000393324 NUTM2GQ5VZR2 741 aa26.29■■□□□ 1.8
ME3-202ENST00000393324 FANCIQ9NVI1 1328 aa26.28■■□□□ 1.8
ME3-202ENST00000393324 TSR2Q969E8 191 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms