RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZNF521Q96K83 1311 aa19.8■□□□□ 0.76
MKS1-202ENST00000393119 EDC4Q6P2E9 1401 aaKnown RBP19.79■□□□□ 0.76
MKS1-202ENST00000393119 CDC42BPGQ6DT37 1551 aa19.79■□□□□ 0.76
MKS1-202ENST00000393119 INSRP06213 1382 aa19.79■□□□□ 0.76
MKS1-202ENST00000393119 ZNF142P52746 1687 aaPredicted RBP19.79■□□□□ 0.76
MKS1-202ENST00000393119 PLEKHG3A1L390 1219 aa19.78■□□□□ 0.76
MKS1-202ENST00000393119 XRN1Q8IZH2 1706 aaKnown RBP19.78■□□□□ 0.76
MKS1-202ENST00000393119 NPHP4O75161 1426 aaPredicted RBP19.78■□□□□ 0.76
MKS1-202ENST00000393119 TTC21BQ7Z4L5 1316 aa19.78■□□□□ 0.76
MKS1-202ENST00000393119 SETD1BQ9UPS6 1966 aaKnown RBP19.78■□□□□ 0.76
MKS1-202ENST00000393119 TCP11L2Q8N4U5 519 aa19.78■□□□□ 0.76
MKS1-202ENST00000393119 NUTM2GQ5VZR2 741 aa19.77■□□□□ 0.76
MKS1-202ENST00000393119 KDM4FA0A1W2PPD8 638 aa19.77■□□□□ 0.75
MKS1-202ENST00000393119 NGDNQ8NEJ9 315 aaKnown RBP19.77■□□□□ 0.75
MKS1-202ENST00000393119 ADGRB2O60241 1585 aa19.77■□□□□ 0.75
MKS1-202ENST00000393119 DIP2AQ14689 1571 aa19.77■□□□□ 0.75
MKS1-202ENST00000393119 PLIN1O60240 522 aa19.76■□□□□ 0.75
MKS1-202ENST00000393119 COG3Q96JB2 828 aa19.76■□□□□ 0.75
MKS1-202ENST00000393119 ZNF692Q9BU19 519 aaPredicted RBP19.76■□□□□ 0.75
MKS1-202ENST00000393119 RCAN3Q9UKA8 241 aa19.76■□□□□ 0.75
MKS1-202ENST00000393119 PDE3BQ13370 1112 aa19.75■□□□□ 0.75
MKS1-202ENST00000393119 DUSP27Q5VZP5 1158 aa19.75■□□□□ 0.75
MKS1-202ENST00000393119 RGPD8O14715 1765 aaPredicted RBP19.75■□□□□ 0.75
MKS1-202ENST00000393119 COL3A1P02461 1466 aaPredicted RBP19.75■□□□□ 0.75
MKS1-202ENST00000393119 RUNDC1Q96C34 613 aa19.75■□□□□ 0.75
MKS1-202ENST00000393119 GOLGA2Q08379 1002 aa19.74■□□□□ 0.75
MKS1-202ENST00000393119 KIF20BQ96Q89 1820 aa19.74■□□□□ 0.75
MKS1-202ENST00000393119 DIAPH1O60610 1272 aaKnown RBP19.73■□□□□ 0.75
MKS1-202ENST00000393119 C14orf37Q86TY3 774 aa19.73■□□□□ 0.75
MKS1-202ENST00000393119 WWC1Q8IX03 1113 aa19.73■□□□□ 0.75
MKS1-202ENST00000393119 HMOX1P09601 288 aa19.72■□□□□ 0.75
MKS1-202ENST00000393119 PIK3R4Q99570 1358 aa19.72■□□□□ 0.75
MKS1-202ENST00000393119 USP6P35125 1406 aa19.72■□□□□ 0.75
MKS1-202ENST00000393119 PLEKHG5O94827 1062 aa19.71■□□□□ 0.75
MKS1-202ENST00000393119 SLFN5Q08AF3 891 aa19.71■□□□□ 0.75
MKS1-202ENST00000393119 RNF123Q5XPI4 1314 aa19.71■□□□□ 0.75
MKS1-202ENST00000393119 ANKRD26Q9UPS8 1709 aa19.7■□□□□ 0.74
MKS1-202ENST00000393119 B4GALNT3Q6L9W6 998 aa19.7■□□□□ 0.74
MKS1-202ENST00000393119 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
MKS1-202ENST00000393119 PNPLA6Q8IY17 1366 aa19.7■□□□□ 0.74
MKS1-202ENST00000393119 MON2Q7Z3U7 1717 aa19.7■□□□□ 0.74
MKS1-202ENST00000393119 TOPAZ1Q8N9V7 1692 aa19.7■□□□□ 0.74
MKS1-202ENST00000393119 CHD2O14647 1828 aaKnown RBP19.69■□□□□ 0.74
MKS1-202ENST00000393119 XPCQ01831 940 aaPredicted RBP19.69■□□□□ 0.74
MKS1-202ENST00000393119 AKAP12Q02952 1782 aa19.69■□□□□ 0.74
MKS1-202ENST00000393119 PAK3O75914 559 aaPredicted RBP19.68■□□□□ 0.74
MKS1-202ENST00000393119 RRP1P56182 461 aaKnown RBP19.68■□□□□ 0.74
MKS1-202ENST00000393119 ESCO1Q5FWF5 840 aa19.68■□□□□ 0.74
MKS1-202ENST00000393119 ORAI2Q96SN7 254 aa19.68■□□□□ 0.74
MKS1-202ENST00000393119 ITSN1Q15811 1721 aa19.67■□□□□ 0.74
MKS1-202ENST00000393119 SSH2Q76I76 1423 aa19.67■□□□□ 0.74
MKS1-202ENST00000393119 PROSER2Q86WR7 435 aaPredicted RBP19.66■□□□□ 0.74
MKS1-202ENST00000393119 NALCNQ8IZF0 1738 aa19.66■□□□□ 0.74
MKS1-202ENST00000393119 IL13P35225 146 aa19.66■□□□□ 0.74
MKS1-202ENST00000393119 MAP2P11137 1827 aaKnown RBP19.66■□□□□ 0.74
MKS1-202ENST00000393119 PHACTR3Q96KR7 559 aa19.65■□□□□ 0.74
MKS1-202ENST00000393119 IQSEC2Q5JU85 1478 aa19.65■□□□□ 0.74
MKS1-202ENST00000393119 HSP90AB2PQ58FF8 381 aa19.65■□□□□ 0.74
MKS1-202ENST00000393119 TRMT2AQ8IZ69 625 aaKnown RBP19.65■□□□□ 0.74
MKS1-202ENST00000393119 PRKAR2BP31323 418 aa19.64■□□□□ 0.74
MKS1-202ENST00000393119 C20orf194Q5TEA3 1177 aa19.64■□□□□ 0.74
MKS1-202ENST00000393119 PHF8Q9UPP1 1060 aa19.64■□□□□ 0.73
MKS1-202ENST00000393119 NRKQ7Z2Y5 1582 aa19.63■□□□□ 0.73
MKS1-202ENST00000393119 EXOC6Q8TAG9 804 aa19.63■□□□□ 0.73
MKS1-202ENST00000393119 NLRP6P59044 892 aa19.63■□□□□ 0.73
MKS1-202ENST00000393119 OVOS2A0A0J9YW53 1432 aa19.63■□□□□ 0.73
MKS1-202ENST00000393119 OVOS2Q6IE36 1432 aa19.63■□□□□ 0.73
MKS1-202ENST00000393119 TMPOP42166 694 aaKnown RBP19.62■□□□□ 0.73
MKS1-202ENST00000393119 RSPH6AQ9H0K4 717 aa19.62■□□□□ 0.73
MKS1-202ENST00000393119 AEBP1Q8IUX7 1158 aa19.62■□□□□ 0.73
MKS1-202ENST00000393119 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
MKS1-202ENST00000393119 TRIM35Q9UPQ4 493 aa19.62■□□□□ 0.73
MKS1-202ENST00000393119 FOXO3O43524 673 aa19.61■□□□□ 0.73
MKS1-202ENST00000393119 BCAR3O75815 825 aa19.61■□□□□ 0.73
MKS1-202ENST00000393119 AATKQ6ZMQ8 1374 aa19.61■□□□□ 0.73
MKS1-202ENST00000393119 ABTB2Q8N961 1025 aa19.61■□□□□ 0.73
MKS1-202ENST00000393119 PPP4R2Q9NY27 417 aa19.61■□□□□ 0.73
MKS1-202ENST00000393119 DDX17Q92841 729 aaKnown RBP19.6■□□□□ 0.73
MKS1-202ENST00000393119 RBM19Q9Y4C8 960 aaKnown RBP19.6■□□□□ 0.73
MKS1-202ENST00000393119 FMN2Q9NZ56 1722 aa19.6■□□□□ 0.73
MKS1-202ENST00000393119 ADGRL3Q9HAR2 1447 aa19.6■□□□□ 0.73
MKS1-202ENST00000393119 E9PSI1 815 aa19.59■□□□□ 0.73
MKS1-202ENST00000393119 EIF4A2Q14240 407 aaKnown RBP19.59■□□□□ 0.73
MKS1-202ENST00000393119 MAP3K19Q56UN5 1328 aa19.59■□□□□ 0.73
MKS1-202ENST00000393119 RIPK4P57078 832 aa19.59■□□□□ 0.73
MKS1-202ENST00000393119 TSR2Q969E8 191 aaKnown RBP19.59■□□□□ 0.73
MKS1-202ENST00000393119 MAPK8IP3Q9UPT6 1336 aa19.59■□□□□ 0.73
MKS1-202ENST00000393119 THUMPD2Q9BTF0 503 aaKnown RBP19.58■□□□□ 0.73
MKS1-202ENST00000393119 ANKARQ7Z5J8 1434 aa19.58■□□□□ 0.73
MKS1-202ENST00000393119 PSME1Q06323 249 aa19.57■□□□□ 0.72
MKS1-202ENST00000393119 TTC21AQ8NDW8 1320 aa19.56■□□□□ 0.72
MKS1-202ENST00000393119 FCHSD2O94868 740 aa19.56■□□□□ 0.72
MKS1-202ENST00000393119 LRRC7Q96NW7 1537 aa19.56■□□□□ 0.72
MKS1-202ENST00000393119 CDK12Q9NYV4 1490 aaPredicted RBP19.55■□□□□ 0.72
MKS1-202ENST00000393119 TMEM94Q12767 1356 aa19.55■□□□□ 0.72
MKS1-202ENST00000393119 USP31Q70CQ4 1352 aa19.55■□□□□ 0.72
MKS1-202ENST00000393119 SULT6B1Q6IMI4 303 aa19.55■□□□□ 0.72
MKS1-202ENST00000393119 PEAK1Q9H792 1746 aa19.55■□□□□ 0.72
MKS1-202ENST00000393119 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
MKS1-202ENST00000393119 ZBTB7CA1YPR0 619 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms