RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 BEGAINQ9BUH8 593 aa4.72□□□□□ -1.65
RNU6-1228P-201ENST00000391014 KLF16Q9BXK1 252 aaPredicted RBP4.72□□□□□ -1.65
RNU6-1228P-201ENST00000391014 NNTQ13423 1086 aa4.71□□□□□ -1.66
RNU6-1228P-201ENST00000391014 LYPD8Q6UX82 237 aa4.71□□□□□ -1.66
RNU6-1228P-201ENST00000391014 FOXJ1Q92949 421 aa4.71□□□□□ -1.66
RNU6-1228P-201ENST00000391014 TBC1D2Q9BYX2 928 aa4.71□□□□□ -1.66
RNU6-1228P-201ENST00000391014 H3BM21 787 aa4.7□□□□□ -1.66
RNU6-1228P-201ENST00000391014 TIMP2P16035 220 aa4.7□□□□□ -1.66
RNU6-1228P-201ENST00000391014 VARSP26640 1264 aaKnown RBP4.7□□□□□ -1.66
RNU6-1228P-201ENST00000391014 C4orf48Q5BLP8 95 aa4.7□□□□□ -1.66
RNU6-1228P-201ENST00000391014 DESI1Q6ICB0 168 aa4.7□□□□□ -1.66
RNU6-1228P-201ENST00000391014 RSBN1LQ6PCB5 846 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1228P-201ENST00000391014 MPNDQ8N594 471 aa4.7□□□□□ -1.66
RNU6-1228P-201ENST00000391014 SLC16A10Q8TF71 515 aa4.7□□□□□ -1.66
RNU6-1228P-201ENST00000391014 PURBQ96QR8 312 aaKnown RBP4.7□□□□□ -1.66
RNU6-1228P-201ENST00000391014 SPDYE5A6NIY4 337 aa4.69□□□□□ -1.66
RNU6-1228P-201ENST00000391014 PER1O15534 1290 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1228P-201ENST00000391014 F12P00748 615 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1228P-201ENST00000391014 HRCP23327 699 aa4.69□□□□□ -1.66
RNU6-1228P-201ENST00000391014 CTHP32929 405 aa4.69□□□□□ -1.66
RNU6-1228P-201ENST00000391014 WDR4P57081 412 aaKnown RBP4.69□□□□□ -1.66
RNU6-1228P-201ENST00000391014 MRPL14Q6P1L8 145 aaKnown RBP4.69□□□□□ -1.66
RNU6-1228P-201ENST00000391014 PARP9Q8IXQ6 854 aa4.69□□□□□ -1.66
RNU6-1228P-201ENST00000391014 CABLES1Q8TDN4 633 aa4.69□□□□□ -1.66
RNU6-1228P-201ENST00000391014 MAP10Q9P2G4 905 aa4.69□□□□□ -1.66
RNU6-1228P-201ENST00000391014 PLEKHG3A1L390 1219 aa4.68□□□□□ -1.66
RNU6-1228P-201ENST00000391014 TRIM66O15016 1216 aa4.68□□□□□ -1.66
RNU6-1228P-201ENST00000391014 SPTLC1O15269 473 aa4.68□□□□□ -1.66
RNU6-1228P-201ENST00000391014 GRM5P41594 1212 aa4.68□□□□□ -1.66
RNU6-1228P-201ENST00000391014 NPAS3Q8IXF0 933 aa4.68□□□□□ -1.66
RNU6-1228P-201ENST00000391014 ZSCAN1Q8NBB4 408 aa4.68□□□□□ -1.66
RNU6-1228P-201ENST00000391014 IRF7Q92985 503 aa4.68□□□□□ -1.66
RNU6-1228P-201ENST00000391014 ZFAND3Q9H8U3 227 aa4.68□□□□□ -1.66
RNU6-1228P-201ENST00000391014 NR3C2P08235 984 aa4.67□□□□□ -1.66
RNU6-1228P-201ENST00000391014 GJA5P36382 358 aa4.67□□□□□ -1.66
RNU6-1228P-201ENST00000391014 ARID5BQ14865 1188 aa4.67□□□□□ -1.66
RNU6-1228P-201ENST00000391014 CSPP1Q1MSJ5 1256 aa4.67□□□□□ -1.66
RNU6-1228P-201ENST00000391014 RIC3Q7Z5B4 369 aa4.67□□□□□ -1.66
RNU6-1228P-201ENST00000391014 ITPKCQ96DU7 683 aa4.67□□□□□ -1.66
RNU6-1228P-201ENST00000391014 CDK15Q96Q40 435 aa4.67□□□□□ -1.66
RNU6-1228P-201ENST00000391014 ADH1CP00326 375 aa4.66□□□□□ -1.66
RNU6-1228P-201ENST00000391014 FAM174AQ8TBP5 190 aa4.66□□□□□ -1.66
RNU6-1228P-201ENST00000391014 LIMD1Q9UGP4 676 aa4.66□□□□□ -1.66
RNU6-1228P-201ENST00000391014 ZIC2O95409 532 aaPredicted RBP4.65□□□□□ -1.67
RNU6-1228P-201ENST00000391014 QPCTQ16769 361 aa4.65□□□□□ -1.67
RNU6-1228P-201ENST00000391014 ZBTB3Q9H5J0 574 aa4.65□□□□□ -1.67
RNU6-1228P-201ENST00000391014 SCARF1Q14162 830 aa4.64□□□□□ -1.67
RNU6-1228P-201ENST00000391014 C6orf118Q5T5N4 469 aa4.64□□□□□ -1.67
RNU6-1228P-201ENST00000391014 LILRB3O75022 631 aa4.63□□□□□ -1.67
RNU6-1228P-201ENST00000391014 AGERQ15109 404 aa4.63□□□□□ -1.67
RNU6-1228P-201ENST00000391014 DIXDC1Q155Q3 683 aa4.63□□□□□ -1.67
RNU6-1228P-201ENST00000391014 RTL5Q5HYW3 569 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1228P-201ENST00000391014 PRPF38BQ5VTL8 546 aaKnown RBP4.63□□□□□ -1.67
RNU6-1228P-201ENST00000391014 MYSM1Q5VVJ2 828 aa4.63□□□□□ -1.67
RNU6-1228P-201ENST00000391014 SH3RF1Q7Z6J0 888 aa4.63□□□□□ -1.67
RNU6-1228P-201ENST00000391014 PPFIA3O75145 1194 aa4.62□□□□□ -1.67
RNU6-1228P-201ENST00000391014 VSIG8P0DPA2 414 aa4.62□□□□□ -1.67
RNU6-1228P-201ENST00000391014 NR5A1Q13285 461 aa4.62□□□□□ -1.67
RNU6-1228P-201ENST00000391014 BPHLQ86WA6 291 aaPredicted RBP4.62□□□□□ -1.67
RNU6-1228P-201ENST00000391014 TSC1Q92574 1164 aa4.62□□□□□ -1.67
RNU6-1228P-201ENST00000391014 AK7Q96M32 723 aa4.62□□□□□ -1.67
RNU6-1228P-201ENST00000391014 FAM181BA6NEQ2 426 aa4.61□□□□□ -1.67
RNU6-1228P-201ENST00000391014 BMP2P12643 396 aa4.61□□□□□ -1.67
RNU6-1228P-201ENST00000391014 PDE4DQ08499 809 aa4.61□□□□□ -1.67
RNU6-1228P-201ENST00000391014 SH3BP5LQ7L8J4 393 aa4.61□□□□□ -1.67
RNU6-1228P-201ENST00000391014 LINC00528Q8N1L1 170 aa4.61□□□□□ -1.67
RNU6-1228P-201ENST00000391014 GPR161Q8N6U8 529 aaKnown RBP4.61□□□□□ -1.67
RNU6-1228P-201ENST00000391014 C1QTNF2Q9BXJ5 285 aa4.61□□□□□ -1.67
RNU6-1228P-201ENST00000391014 DNMT3LQ9UJW3 386 aa4.61□□□□□ -1.67
RNU6-1228P-201ENST00000391014 NUTM2BA6NNL0 878 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1228P-201ENST00000391014 NUTM2EB1AL46 878 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1228P-201ENST00000391014 MAN1A2O60476 641 aa4.6□□□□□ -1.67
RNU6-1228P-201ENST00000391014 KRT76Q01546 638 aa4.6□□□□□ -1.67
RNU6-1228P-201ENST00000391014 NUTM2DQ5VT03 806 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1228P-201ENST00000391014 FBXO31Q5XUX0 539 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1228P-201ENST00000391014 NUTM2AQ8IVF1 878 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1228P-201ENST00000391014 MEIOBQ8N635 442 aa4.6□□□□□ -1.67
RNU6-1228P-201ENST00000391014 SOS2Q07890 1332 aaPredicted RBP4.6□□□□□ -1.67
RNU6-1228P-201ENST00000391014 FSHRP23945 695 aa4.59□□□□□ -1.67
RNU6-1228P-201ENST00000391014 GSK3AP49840 483 aa4.59□□□□□ -1.67
RNU6-1228P-201ENST00000391014 CTDSPL2Q05D32 466 aa4.59□□□□□ -1.67
RNU6-1228P-201ENST00000391014 CBLBQ13191 982 aa4.59□□□□□ -1.67
RNU6-1228P-201ENST00000391014 TUSC1Q2TAM9 212 aa4.59□□□□□ -1.67
RNU6-1228P-201ENST00000391014 VASH1Q7L8A9 365 aaPredicted RBP4.59□□□□□ -1.67
RNU6-1228P-201ENST00000391014 SLC24A3Q9HC58 644 aa4.59□□□□□ -1.67
RNU6-1228P-201ENST00000391014 MAGEB6P1A0A0J9YX57 407 aa4.58□□□□□ -1.68
RNU6-1228P-201ENST00000391014 TRMT44Q8IYL2 757 aaKnown RBP4.58□□□□□ -1.68
RNU6-1228P-201ENST00000391014 POLR3EQ9NVU0 708 aa4.58□□□□□ -1.68
RNU6-1228P-201ENST00000391014 FIGNL2A6NMB9 653 aa4.57□□□□□ -1.68
RNU6-1228P-201ENST00000391014 ERFEQ4G0M1 354 aa4.57□□□□□ -1.68
RNU6-1228P-201ENST00000391014 CCDC116Q8IYX3 515 aa4.57□□□□□ -1.68
RNU6-1228P-201ENST00000391014 CARD14Q9BXL6 1004 aa4.57□□□□□ -1.68
RNU6-1228P-201ENST00000391014 MAP4K5Q9Y4K4 846 aa4.57□□□□□ -1.68
RNU6-1228P-201ENST00000391014 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 UPP2O95045 317 aa4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 CLK2P49760 499 aaKnown RBP4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 PTSQ03393 145 aa4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 PPP1R26Q5T8A7 1209 aaPredicted RBP4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 ARMC2Q8NEN0 867 aa4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 LRRN4Q8WUT4 740 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms