RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
RNU6-1009P-201ENST00000390996 LYPD8Q6UX82 237 aa8.57□□□□□ -1.04
RNU6-1009P-201ENST00000390996 VARSP26640 1264 aaKnown RBP8.56□□□□□ -1.04
RNU6-1009P-201ENST00000390996 STK17AQ9UEE5 414 aa8.55□□□□□ -1.04
RNU6-1009P-201ENST00000390996 F12P00748 615 aaPredicted RBP8.54□□□□□ -1.04
RNU6-1009P-201ENST00000390996 HRCP23327 699 aa8.54□□□□□ -1.04
RNU6-1009P-201ENST00000390996 DIXDC1Q155Q3 683 aa8.54□□□□□ -1.04
RNU6-1009P-201ENST00000390996 INSM1Q01101 510 aaPredicted RBP8.53□□□□□ -1.04
RNU6-1009P-201ENST00000390996 NNTQ13423 1086 aa8.52□□□□□ -1.05
RNU6-1009P-201ENST00000390996 PRPF38BQ5VTL8 546 aaKnown RBP8.52□□□□□ -1.05
RNU6-1009P-201ENST00000390996 KLF16Q9BXK1 252 aaPredicted RBP8.52□□□□□ -1.05
RNU6-1009P-201ENST00000390996 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
RNU6-1009P-201ENST00000390996 MAP10Q9P2G4 905 aa8.52□□□□□ -1.05
RNU6-1009P-201ENST00000390996 NXF1Q9UBU9 619 aaKnown RBP8.52□□□□□ -1.05
RNU6-1009P-201ENST00000390996 PLEKHG3A1L390 1219 aa8.51□□□□□ -1.05
RNU6-1009P-201ENST00000390996 TIMP2P16035 220 aa8.51□□□□□ -1.05
RNU6-1009P-201ENST00000390996 CTHP32929 405 aa8.51□□□□□ -1.05
RNU6-1009P-201ENST00000390996 RIC3Q7Z5B4 369 aa8.51□□□□□ -1.05
RNU6-1009P-201ENST00000390996 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
RNU6-1009P-201ENST00000390996 AK7Q96M32 723 aa8.51□□□□□ -1.05
RNU6-1009P-201ENST00000390996 NPAS3Q8IXF0 933 aa8.5□□□□□ -1.05
RNU6-1009P-201ENST00000390996 FOXJ1Q92949 421 aa8.5□□□□□ -1.05
RNU6-1009P-201ENST00000390996 ZFP42Q96MM3 310 aa8.5□□□□□ -1.05
RNU6-1009P-201ENST00000390996 CDK15Q96Q40 435 aa8.5□□□□□ -1.05
RNU6-1009P-201ENST00000390996 FAM174AQ8TBP5 190 aa8.49□□□□□ -1.05
RNU6-1009P-201ENST00000390996 H3BM21 787 aa8.48□□□□□ -1.05
RNU6-1009P-201ENST00000390996 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
RNU6-1009P-201ENST00000390996 ADH1CP00326 375 aa8.48□□□□□ -1.05
RNU6-1009P-201ENST00000390996 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
RNU6-1009P-201ENST00000390996 SLC16A10Q8TF71 515 aa8.48□□□□□ -1.05
RNU6-1009P-201ENST00000390996 LIMD1Q9UGP4 676 aa8.48□□□□□ -1.05
RNU6-1009P-201ENST00000390996 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
RNU6-1009P-201ENST00000390996 GMPRP36959 345 aa8.47□□□□□ -1.05
RNU6-1009P-201ENST00000390996 WDR4P57081 412 aaKnown RBP8.47□□□□□ -1.05
RNU6-1009P-201ENST00000390996 QPCTQ16769 361 aa8.47□□□□□ -1.05
RNU6-1009P-201ENST00000390996 TUSC1Q2TAM9 212 aa8.47□□□□□ -1.05
RNU6-1009P-201ENST00000390996 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
RNU6-1009P-201ENST00000390996 MRPL14Q6P1L8 145 aaKnown RBP8.47□□□□□ -1.05
RNU6-1009P-201ENST00000390996 CSPP1Q1MSJ5 1256 aa8.46□□□□□ -1.06
RNU6-1009P-201ENST00000390996 LILRB3O75022 631 aa8.45□□□□□ -1.06
RNU6-1009P-201ENST00000390996 VEGFBP49765 207 aa8.45□□□□□ -1.06
RNU6-1009P-201ENST00000390996 PDE4DQ08499 809 aa8.45□□□□□ -1.06
RNU6-1009P-201ENST00000390996 ERBB4Q15303 1308 aa8.45□□□□□ -1.06
RNU6-1009P-201ENST00000390996 NR3C2P08235 984 aa8.44□□□□□ -1.06
RNU6-1009P-201ENST00000390996 GRM5P41594 1212 aa8.44□□□□□ -1.06
RNU6-1009P-201ENST00000390996 IRF7Q92985 503 aa8.44□□□□□ -1.06
RNU6-1009P-201ENST00000390996 PURBQ96QR8 312 aaKnown RBP8.44□□□□□ -1.06
RNU6-1009P-201ENST00000390996 C1QTNF2Q9BXJ5 285 aa8.43□□□□□ -1.06
RNU6-1009P-201ENST00000390996 ZFAND3Q9H8U3 227 aa8.43□□□□□ -1.06
RNU6-1009P-201ENST00000390996 NR5A1Q13285 461 aa8.42□□□□□ -1.06
RNU6-1009P-201ENST00000390996 SCARF1Q14162 830 aa8.42□□□□□ -1.06
RNU6-1009P-201ENST00000390996 SH3RF1Q7Z6J0 888 aa8.42□□□□□ -1.06
RNU6-1009P-201ENST00000390996 BPHLQ86WA6 291 aaPredicted RBP8.42□□□□□ -1.06
RNU6-1009P-201ENST00000390996 ITPKCQ96DU7 683 aa8.42□□□□□ -1.06
RNU6-1009P-201ENST00000390996 SOBPA7XYQ1 873 aa8.41□□□□□ -1.06
RNU6-1009P-201ENST00000390996 ZIC2O95409 532 aaPredicted RBP8.41□□□□□ -1.06
RNU6-1009P-201ENST00000390996 ARID5BQ14865 1188 aa8.41□□□□□ -1.06
RNU6-1009P-201ENST00000390996 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.06
RNU6-1009P-201ENST00000390996 SH3BP5LQ7L8J4 393 aa8.4□□□□□ -1.06
RNU6-1009P-201ENST00000390996 NUTM2BA6NNL0 878 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1009P-201ENST00000390996 NUTM2EB1AL46 878 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1009P-201ENST00000390996 AGERQ15109 404 aa8.39□□□□□ -1.07
RNU6-1009P-201ENST00000390996 NUTM2DQ5VT03 806 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1009P-201ENST00000390996 NUTM2AQ8IVF1 878 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1009P-201ENST00000390996 VSIG8P0DPA2 414 aa8.38□□□□□ -1.07
RNU6-1009P-201ENST00000390996 TRMT44Q8IYL2 757 aaKnown RBP8.38□□□□□ -1.07
RNU6-1009P-201ENST00000390996 ZSCAN1Q8NBB4 408 aa8.38□□□□□ -1.07
RNU6-1009P-201ENST00000390996 ARMC2Q8NEN0 867 aa8.38□□□□□ -1.07
RNU6-1009P-201ENST00000390996 TSC1Q92574 1164 aa8.38□□□□□ -1.07
RNU6-1009P-201ENST00000390996 SLC24A3Q9HC58 644 aa8.38□□□□□ -1.07
RNU6-1009P-201ENST00000390996 MAP4K5Q9Y4K4 846 aa8.38□□□□□ -1.07
RNU6-1009P-201ENST00000390996 CLK2P49760 499 aaKnown RBP8.37□□□□□ -1.07
RNU6-1009P-201ENST00000390996 MEIOBQ8N635 442 aa8.37□□□□□ -1.07
RNU6-1009P-201ENST00000390996 NBPF14Q5TI25 921 aa8.36□□□□□ -1.07
RNU6-1009P-201ENST00000390996 HELBQ8NG08 1087 aaPredicted RBP8.36□□□□□ -1.07
RNU6-1009P-201ENST00000390996 FSHRP23945 695 aa8.35□□□□□ -1.07
RNU6-1009P-201ENST00000390996 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
RNU6-1009P-201ENST00000390996 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
RNU6-1009P-201ENST00000390996 FAM181BA6NEQ2 426 aa8.33□□□□□ -1.08
RNU6-1009P-201ENST00000390996 POLR3EQ9NVU0 708 aa8.33□□□□□ -1.08
RNU6-1009P-201ENST00000390996 SOS2Q07890 1332 aaPredicted RBP8.32□□□□□ -1.08
RNU6-1009P-201ENST00000390996 MAN1A2O60476 641 aa8.32□□□□□ -1.08
RNU6-1009P-201ENST00000390996 BMP2P12643 396 aa8.32□□□□□ -1.08
RNU6-1009P-201ENST00000390996 FBXO31Q5XUX0 539 aaPredicted RBP8.32□□□□□ -1.08
RNU6-1009P-201ENST00000390996 VASH1Q7L8A9 365 aaPredicted RBP8.32□□□□□ -1.08
RNU6-1009P-201ENST00000390996 GPKOWQ92917 476 aaPredicted RBP eCLIP8.32□□□□□ -1.08
RNU6-1009P-201ENST00000390996 RSPH6AQ9H0K4 717 aa8.32□□□□□ -1.08
RNU6-1009P-201ENST00000390996 MAGEB6P1A0A0J9YX57 407 aa8.31□□□□□ -1.08
RNU6-1009P-201ENST00000390996 CTDSPL2Q05D32 466 aa8.31□□□□□ -1.08
RNU6-1009P-201ENST00000390996 ERFEQ4G0M1 354 aa8.31□□□□□ -1.08
RNU6-1009P-201ENST00000390996 DNMT3LQ9UJW3 386 aa8.31□□□□□ -1.08
RNU6-1009P-201ENST00000390996 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
RNU6-1009P-201ENST00000390996 CCDC116Q8IYX3 515 aa8.3□□□□□ -1.08
RNU6-1009P-201ENST00000390996 EMILIN1Q9Y6C2 1016 aa8.3□□□□□ -1.08
RNU6-1009P-201ENST00000390996 UPP2O95045 317 aa8.29□□□□□ -1.08
RNU6-1009P-201ENST00000390996 CARD14Q9BXL6 1004 aa8.29□□□□□ -1.08
RNU6-1009P-201ENST00000390996 PDXDC2PQ6P474 469 aa8.28□□□□□ -1.08
RNU6-1009P-201ENST00000390996 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
RNU6-1009P-201ENST00000390996 TSEN34Q9BSV6 310 aaKnown RBP8.28□□□□□ -1.08
RNU6-1009P-201ENST00000390996 PPP1R26Q5T8A7 1209 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms