RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 AAMPQ13685 434 aa26.5■■□□□ 1.83
COL23A1-201ENST00000390654 IFT172Q9UG01 1749 aa26.49■■□□□ 1.83
COL23A1-201ENST00000390654 HMOX1P09601 288 aa26.48■■□□□ 1.83
COL23A1-201ENST00000390654 CYB5RLQ6IPT4 315 aa26.48■■□□□ 1.83
COL23A1-201ENST00000390654 PANK2Q9BZ23 570 aa26.48■■□□□ 1.83
COL23A1-201ENST00000390654 CABP1Q9NZU7 370 aa26.48■■□□□ 1.83
COL23A1-201ENST00000390654 TULP4Q9NRJ4 1543 aa26.47■■□□□ 1.83
COL23A1-201ENST00000390654 MCM4P33991 863 aa26.47■■□□□ 1.83
COL23A1-201ENST00000390654 WAPLQ7Z5K2 1190 aa26.47■■□□□ 1.83
COL23A1-201ENST00000390654 MYO3AQ8NEV4 1616 aa26.47■■□□□ 1.83
COL23A1-201ENST00000390654 FRMPD1Q5SYB0 1578 aa26.46■■□□□ 1.83
COL23A1-201ENST00000390654 DIAPH1O60610 1272 aaKnown RBP26.46■■□□□ 1.83
COL23A1-201ENST00000390654 RPGRIP1LQ68CZ1 1315 aa26.44■■□□□ 1.82
COL23A1-201ENST00000390654 RRAGDQ9NQL2 400 aaPredicted RBP26.43■■□□□ 1.82
COL23A1-201ENST00000390654 YEATS2Q9ULM3 1422 aa26.43■■□□□ 1.82
COL23A1-201ENST00000390654 SETBP1Q9Y6X0 1596 aa26.43■■□□□ 1.82
COL23A1-201ENST00000390654 HSCBQ8IWL3 235 aa26.43■■□□□ 1.82
COL23A1-201ENST00000390654 ZBTB40Q9NUA8 1239 aa26.43■■□□□ 1.82
COL23A1-201ENST00000390654 PRKAR2BP31323 418 aa26.42■■□□□ 1.82
COL23A1-201ENST00000390654 HDAC1Q13547 482 aaPredicted RBP26.42■■□□□ 1.82
COL23A1-201ENST00000390654 ABCC3O15438 1527 aa26.42■■□□□ 1.82
COL23A1-201ENST00000390654 CDK19Q9BWU1 502 aa26.42■■□□□ 1.82
COL23A1-201ENST00000390654 NEURL4Q96JN8 1562 aa26.41■■□□□ 1.82
COL23A1-201ENST00000390654 XRCC6P12956 609 aaKnown RBP eCLIP26.41■■□□□ 1.82
COL23A1-201ENST00000390654 ANKRD45Q5TZF3 282 aa26.41■■□□□ 1.82
COL23A1-201ENST00000390654 FAM43AQ8N2R8 423 aa26.41■■□□□ 1.82
COL23A1-201ENST00000390654 GOLGA6L3A6NEY3 463 aa26.4■■□□□ 1.82
COL23A1-201ENST00000390654 TERF2IPQ9NYB0 399 aa26.4■■□□□ 1.82
COL23A1-201ENST00000390654 GLI2P10070 1586 aa26.4■■□□□ 1.82
COL23A1-201ENST00000390654 CHMP5Q9NZZ3 219 aa26.4■■□□□ 1.82
COL23A1-201ENST00000390654 TRAK2O60296 914 aa26.4■■□□□ 1.82
COL23A1-201ENST00000390654 SMC5Q8IY18 1101 aa26.4■■□□□ 1.82
COL23A1-201ENST00000390654 PPLO60437 1756 aa26.39■■□□□ 1.81
COL23A1-201ENST00000390654 TSPYL6Q8N831 410 aa26.38■■□□□ 1.81
COL23A1-201ENST00000390654 PHACTR3Q96KR7 559 aa26.38■■□□□ 1.81
COL23A1-201ENST00000390654 L1TD1Q5T7N2 865 aaKnown RBP26.38■■□□□ 1.81
COL23A1-201ENST00000390654 ABCC11Q96J66 1382 aa26.38■■□□□ 1.81
COL23A1-201ENST00000390654 IPO8O15397 1037 aaKnown RBP26.36■■□□□ 1.81
COL23A1-201ENST00000390654 ZRANB1Q9UGI0 708 aa26.36■■□□□ 1.81
COL23A1-201ENST00000390654 NCKAP5LQ9HCH0 1330 aa26.36■■□□□ 1.81
COL23A1-201ENST00000390654 LMTK2Q8IWU2 1503 aa26.36■■□□□ 1.81
COL23A1-201ENST00000390654 NSD2O96028 1365 aa26.36■■□□□ 1.81
COL23A1-201ENST00000390654 HDGFL2Q7Z4V5 671 aaPredicted RBP26.35■■□□□ 1.81
COL23A1-201ENST00000390654 MLH3Q9UHC1 1453 aa26.35■■□□□ 1.81
COL23A1-201ENST00000390654 ZC3H13Q5T200 1668 aaKnown RBP26.35■■□□□ 1.81
COL23A1-201ENST00000390654 NUTM2FA1L443 756 aa26.35■■□□□ 1.81
COL23A1-201ENST00000390654 CT47B1P0C2W7 299 aaPredicted RBP26.35■■□□□ 1.81
COL23A1-201ENST00000390654 CHD1LQ86WJ1 897 aa26.35■■□□□ 1.81
COL23A1-201ENST00000390654 RBM42Q9BTD8 480 aaKnown RBP26.35■■□□□ 1.81
COL23A1-201ENST00000390654 HECW2Q9P2P5 1572 aa26.35■■□□□ 1.81
COL23A1-201ENST00000390654 SIGLEC1Q9BZZ2 1709 aa26.34■■□□□ 1.81
COL23A1-201ENST00000390654 HSP90AA1P07900 732 aaKnown RBP26.33■■□□□ 1.81
COL23A1-201ENST00000390654 NUCB1Q02818 461 aa26.33■■□□□ 1.81
COL23A1-201ENST00000390654 PLPPR3Q6T4P5 718 aa26.33■■□□□ 1.81
COL23A1-201ENST00000390654 HSP90AB1P08238 724 aaKnown RBP26.33■■□□□ 1.81
COL23A1-201ENST00000390654 KIF16BQ96L93 1317 aa26.33■■□□□ 1.81
COL23A1-201ENST00000390654 SLC52A1Q9NWF4 448 aa26.31■■□□□ 1.8
COL23A1-201ENST00000390654 EMILIN1Q9Y6C2 1016 aa26.31■■□□□ 1.8
COL23A1-201ENST00000390654 CAMSAP1Q5T5Y3 1602 aa26.31■■□□□ 1.8
COL23A1-201ENST00000390654 SOX12O15370 315 aa26.31■■□□□ 1.8
COL23A1-201ENST00000390654 CD2BP2O95400 341 aaKnown RBP26.31■■□□□ 1.8
COL23A1-201ENST00000390654 ATAD2Q6PL18 1390 aa26.29■■□□□ 1.8
COL23A1-201ENST00000390654 FAM69CQ0P6D2 419 aa26.28■■□□□ 1.8
COL23A1-201ENST00000390654 DCTN1Q14203 1278 aa26.28■■□□□ 1.8
COL23A1-201ENST00000390654 FAM83GA6ND36 823 aa26.28■■□□□ 1.8
COL23A1-201ENST00000390654 POLKQ9UBT6 870 aa26.28■■□□□ 1.8
COL23A1-201ENST00000390654 ADGRB2O60241 1585 aa26.28■■□□□ 1.8
COL23A1-201ENST00000390654 ARHGEF28Q8N1W1 1705 aaKnown RBP26.27■■□□□ 1.8
COL23A1-201ENST00000390654 NEXMIFQ5QGS0 1516 aa26.27■■□□□ 1.8
COL23A1-201ENST00000390654 PUS7Q96PZ0 661 aaKnown RBP26.27■■□□□ 1.8
COL23A1-201ENST00000390654 ZMYM3Q14202 1370 aa26.26■■□□□ 1.79
COL23A1-201ENST00000390654 APBB1O00213 710 aa26.26■■□□□ 1.79
COL23A1-201ENST00000390654 RRS1Q15050 365 aaKnown RBP26.26■■□□□ 1.79
COL23A1-201ENST00000390654 TNPO1Q92973 898 aaKnown RBP26.26■■□□□ 1.79
COL23A1-201ENST00000390654 ZNF692Q9BU19 519 aaPredicted RBP26.26■■□□□ 1.79
COL23A1-201ENST00000390654 RSPH6AQ9H0K4 717 aa26.26■■□□□ 1.79
COL23A1-201ENST00000390654 NME9Q86XW9 330 aa26.25■■□□□ 1.79
COL23A1-201ENST00000390654 ZBTB7BO15156 539 aaPredicted RBP26.25■■□□□ 1.79
COL23A1-201ENST00000390654 TXNDC2Q86VQ3 553 aa26.25■■□□□ 1.79
COL23A1-201ENST00000390654 COL3A1P02461 1466 aaPredicted RBP26.25■■□□□ 1.79
COL23A1-201ENST00000390654 VAMP4O75379 141 aa26.25■■□□□ 1.79
COL23A1-201ENST00000390654 FCHSD2O94868 740 aa26.24■■□□□ 1.79
COL23A1-201ENST00000390654 IL16Q14005 1332 aa26.24■■□□□ 1.79
COL23A1-201ENST00000390654 USP32Q8NFA0 1604 aa26.24■■□□□ 1.79
COL23A1-201ENST00000390654 YTHDC2Q9H6S0 1430 aaKnown RBP26.24■■□□□ 1.79
COL23A1-201ENST00000390654 SIRT2Q8IXJ6 389 aa26.23■■□□□ 1.79
COL23A1-201ENST00000390654 FSD2A1L4K1 749 aa26.22■■□□□ 1.79
COL23A1-201ENST00000390654 TBC1D9Q6ZT07 1266 aa26.22■■□□□ 1.79
COL23A1-201ENST00000390654 MBIPQ9NS73 344 aa26.22■■□□□ 1.79
COL23A1-201ENST00000390654 NCBP3Q53F19 620 aaKnown RBP26.21■■□□□ 1.79
COL23A1-201ENST00000390654 PPIP5K1Q6PFW1 1433 aa26.21■■□□□ 1.79
COL23A1-201ENST00000390654 ALDH1L2Q3SY69 923 aa26.21■■□□□ 1.79
COL23A1-201ENST00000390654 MRPL50Q8N5N7 158 aaKnown RBP26.21■■□□□ 1.79
COL23A1-201ENST00000390654 CD163L1Q9NR16 1453 aa26.21■■□□□ 1.79
COL23A1-201ENST00000390654 C8orf58Q8NAV2 365 aa26.2■■□□□ 1.79
COL23A1-201ENST00000390654 PNNQ9H307 717 aaKnown RBP26.2■■□□□ 1.79
COL23A1-201ENST00000390654 RBM25P49756 843 aaKnown RBP26.2■■□□□ 1.78
COL23A1-201ENST00000390654 MYO5BQ9ULV0 1848 aa26.19■■□□□ 1.78
COL23A1-201ENST00000390654 KIF2CQ99661 725 aa26.19■■□□□ 1.78
COL23A1-201ENST00000390654 NFE2L2Q16236 605 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms