RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 ARHGEF10O15013 1369 aa13.26□□□□□ -0.29
TRBV20-1-201ENST00000390394 PHLPP1O60346 1717 aa13.26□□□□□ -0.29
TRBV20-1-201ENST00000390394 NHSL1Q5SYE7 1610 aa13.26□□□□□ -0.29
TRBV20-1-201ENST00000390394 PANK3Q9H999 370 aa13.26□□□□□ -0.29
TRBV20-1-201ENST00000390394 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
TRBV20-1-201ENST00000390394 PXDNQ92626 1479 aa13.24□□□□□ -0.29
TRBV20-1-201ENST00000390394 TNS3Q68CZ2 1445 aa13.24□□□□□ -0.29
TRBV20-1-201ENST00000390394 SPATA31A3Q5VYP0 1347 aa13.24□□□□□ -0.29
TRBV20-1-201ENST00000390394 TTC21BQ7Z4L5 1316 aa13.24□□□□□ -0.29
TRBV20-1-201ENST00000390394 NLRP13Q86W25 1043 aa13.24□□□□□ -0.29
TRBV20-1-201ENST00000390394 ABTB2Q8N961 1025 aa13.24□□□□□ -0.29
TRBV20-1-201ENST00000390394 AKAP12Q02952 1782 aa13.24□□□□□ -0.29
TRBV20-1-201ENST00000390394 MYOM1P52179 1685 aa13.24□□□□□ -0.29
TRBV20-1-201ENST00000390394 CD163L1Q9NR16 1453 aa13.23□□□□□ -0.29
TRBV20-1-201ENST00000390394 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
TRBV20-1-201ENST00000390394 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
TRBV20-1-201ENST00000390394 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
TRBV20-1-201ENST00000390394 MON2Q7Z3U7 1717 aa13.22□□□□□ -0.29
TRBV20-1-201ENST00000390394 NSD2O96028 1365 aa13.22□□□□□ -0.29
TRBV20-1-201ENST00000390394 JCADQ9P266 1359 aa13.22□□□□□ -0.29
TRBV20-1-201ENST00000390394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRBV20-1-201ENST00000390394 DDX17Q92841 729 aaKnown RBP13.22□□□□□ -0.29
TRBV20-1-201ENST00000390394 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
TRBV20-1-201ENST00000390394 DDX10Q13206 875 aaKnown RBP13.21□□□□□ -0.29
TRBV20-1-201ENST00000390394 COG3Q96JB2 828 aa13.21□□□□□ -0.29
TRBV20-1-201ENST00000390394 HAP1P54257 671 aaPredicted RBP13.2□□□□□ -0.3
TRBV20-1-201ENST00000390394 NLRP6P59044 892 aa13.2□□□□□ -0.3
TRBV20-1-201ENST00000390394 KCNH5Q8NCM2 988 aa13.2□□□□□ -0.3
TRBV20-1-201ENST00000390394 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRBV20-1-201ENST00000390394 COL16A1Q07092 1604 aaPredicted RBP13.2□□□□□ -0.3
TRBV20-1-201ENST00000390394 SPATA31A6Q5VVP1 1343 aa13.19□□□□□ -0.3
TRBV20-1-201ENST00000390394 CARD14Q9BXL6 1004 aa13.19□□□□□ -0.3
TRBV20-1-201ENST00000390394 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
TRBV20-1-201ENST00000390394 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
TRBV20-1-201ENST00000390394 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
TRBV20-1-201ENST00000390394 TRPM3Q9HCF6 1732 aaPredicted RBP13.18□□□□□ -0.3
TRBV20-1-201ENST00000390394 SRCAPQ6ZRS2 3230 aa13.17□□□□□ -0.3
TRBV20-1-201ENST00000390394 NRKQ7Z2Y5 1582 aa13.17□□□□□ -0.3
TRBV20-1-201ENST00000390394 FYB1O15117 783 aa13.17□□□□□ -0.3
TRBV20-1-201ENST00000390394 PNPLA6Q8IY17 1366 aa13.17□□□□□ -0.3
TRBV20-1-201ENST00000390394 ALS2Q96Q42 1657 aa13.16□□□□□ -0.3
TRBV20-1-201ENST00000390394 NME9Q86XW9 330 aa13.16□□□□□ -0.3
TRBV20-1-201ENST00000390394 SHPRHQ149N8 1683 aa13.15□□□□□ -0.3
TRBV20-1-201ENST00000390394 USP19O94966 1318 aa13.14□□□□□ -0.31
TRBV20-1-201ENST00000390394 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
TRBV20-1-201ENST00000390394 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
TRBV20-1-201ENST00000390394 GGNBP2Q9H3C7 697 aa13.14□□□□□ -0.31
TRBV20-1-201ENST00000390394 COL22A1Q8NFW1 1626 aaPredicted RBP13.13□□□□□ -0.31
TRBV20-1-201ENST00000390394 GCP02774 474 aa13.13□□□□□ -0.31
TRBV20-1-201ENST00000390394 NUTM2GQ5VZR2 741 aa13.13□□□□□ -0.31
TRBV20-1-201ENST00000390394 ZNF772Q68DY9 489 aaPredicted RBP13.13□□□□□ -0.31
TRBV20-1-201ENST00000390394 KIF20BQ96Q89 1820 aa13.13□□□□□ -0.31
TRBV20-1-201ENST00000390394 OVOS2A0A0J9YW53 1432 aa13.13□□□□□ -0.31
TRBV20-1-201ENST00000390394 OVOS2Q6IE36 1432 aa13.13□□□□□ -0.31
TRBV20-1-201ENST00000390394 PIK3C2AO00443 1686 aa13.12□□□□□ -0.31
TRBV20-1-201ENST00000390394 RALBP1Q15311 655 aa13.12□□□□□ -0.31
TRBV20-1-201ENST00000390394 USP54Q70EL1 1684 aa13.12□□□□□ -0.31
TRBV20-1-201ENST00000390394 CDK12Q9NYV4 1490 aaPredicted RBP13.11□□□□□ -0.31
TRBV20-1-201ENST00000390394 CC2D1BQ5T0F9 858 aaKnown RBP13.11□□□□□ -0.31
TRBV20-1-201ENST00000390394 ANP32CO43423 234 aa13.1□□□□□ -0.31
TRBV20-1-201ENST00000390394 MEX3CQ5U5Q3 659 aaKnown RBP13.1□□□□□ -0.31
TRBV20-1-201ENST00000390394 LRP6O75581 1613 aa13.1□□□□□ -0.31
TRBV20-1-201ENST00000390394 CPDO75976 1380 aa13.09□□□□□ -0.31
TRBV20-1-201ENST00000390394 KIF24Q5T7B8 1368 aa13.09□□□□□ -0.31
TRBV20-1-201ENST00000390394 AATKQ6ZMQ8 1374 aa13.09□□□□□ -0.31
TRBV20-1-201ENST00000390394 SLIT3O75094 1523 aa13.09□□□□□ -0.31
TRBV20-1-201ENST00000390394 NUTM2BA6NNL0 878 aaPredicted RBP13.09□□□□□ -0.31
TRBV20-1-201ENST00000390394 NUTM2EB1AL46 878 aaPredicted RBP13.09□□□□□ -0.31
TRBV20-1-201ENST00000390394 NUTM2AQ8IVF1 878 aaPredicted RBP13.09□□□□□ -0.31
TRBV20-1-201ENST00000390394 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
TRBV20-1-201ENST00000390394 PRDM11Q9NQV5 511 aa13.09□□□□□ -0.31
TRBV20-1-201ENST00000390394 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
TRBV20-1-201ENST00000390394 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
TRBV20-1-201ENST00000390394 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.32
TRBV20-1-201ENST00000390394 SOX12O15370 315 aa13.07□□□□□ -0.32
TRBV20-1-201ENST00000390394 AMPHP49418 695 aa13.07□□□□□ -0.32
TRBV20-1-201ENST00000390394 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
TRBV20-1-201ENST00000390394 RXRBP28702 533 aa13.06□□□□□ -0.32
TRBV20-1-201ENST00000390394 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
TRBV20-1-201ENST00000390394 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
TRBV20-1-201ENST00000390394 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
TRBV20-1-201ENST00000390394 ABCC6O95255 1503 aa13.05□□□□□ -0.32
TRBV20-1-201ENST00000390394 ADAMTS2O95450 1211 aa13.05□□□□□ -0.32
TRBV20-1-201ENST00000390394 TNNT2P45379 298 aaPredicted RBP13.05□□□□□ -0.32
TRBV20-1-201ENST00000390394 CNGB1Q14028 1251 aaPredicted RBP13.05□□□□□ -0.32
TRBV20-1-201ENST00000390394 NGLY1Q96IV0 654 aa13.05□□□□□ -0.32
TRBV20-1-201ENST00000390394 CFAP53Q96M91 514 aa13.05□□□□□ -0.32
TRBV20-1-201ENST00000390394 PARD3Q8TEW0 1356 aa13.05□□□□□ -0.32
TRBV20-1-201ENST00000390394 KIAA0232Q92628 1395 aa13.05□□□□□ -0.32
TRBV20-1-201ENST00000390394 ZBTB7CA1YPR0 619 aa13.04□□□□□ -0.32
TRBV20-1-201ENST00000390394 DIEXFQ68CQ4 756 aaKnown RBP13.04□□□□□ -0.32
TRBV20-1-201ENST00000390394 PRKRIP1Q9H875 184 aaPredicted RBP13.04□□□□□ -0.32
TRBV20-1-201ENST00000390394 CRYBG1Q9Y4K1 1723 aa13.04□□□□□ -0.32
TRBV20-1-201ENST00000390394 FLT4P35916 1363 aa13.04□□□□□ -0.32
TRBV20-1-201ENST00000390394 NFAT5O94916 1531 aa13.03□□□□□ -0.32
TRBV20-1-201ENST00000390394 ABCA3Q99758 1704 aa13.03□□□□□ -0.32
TRBV20-1-201ENST00000390394 IP6K1Q92551 441 aa13.03□□□□□ -0.32
TRBV20-1-201ENST00000390394 C8orf37Q96NL8 207 aa13.03□□□□□ -0.32
TRBV20-1-201ENST00000390394 MAP3K19Q56UN5 1328 aa13.03□□□□□ -0.32
TRBV20-1-201ENST00000390394 MYBBP1AQ9BQG0 1328 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms