RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 AMER1Q5JTC6 1135 aaPredicted RBP19.6■□□□□ 0.73
PTPRN2-201ENST00000389413 K7ELQ4 463 aaPredicted RBP19.6■□□□□ 0.73
PTPRN2-201ENST00000389413 NEK4P51957 841 aa19.6■□□□□ 0.73
PTPRN2-201ENST00000389413 RNF20Q5VTR2 975 aa19.6■□□□□ 0.73
PTPRN2-201ENST00000389413 ABCC11Q96J66 1382 aa19.6■□□□□ 0.73
PTPRN2-201ENST00000389413 MCM2P49736 904 aa19.6■□□□□ 0.73
PTPRN2-201ENST00000389413 PSME1Q06323 249 aa19.6■□□□□ 0.73
PTPRN2-201ENST00000389413 NUP160Q12769 1436 aa19.6■□□□□ 0.73
PTPRN2-201ENST00000389413 GPRASP1Q5JY77 1395 aa19.59■□□□□ 0.73
PTPRN2-201ENST00000389413 ISY1Q9ULR0 285 aaKnown RBP19.59■□□□□ 0.73
PTPRN2-201ENST00000389413 CIZ1Q9ULV3 898 aaPredicted RBP19.59■□□□□ 0.73
PTPRN2-201ENST00000389413 GNAI2P04899 355 aa19.59■□□□□ 0.73
PTPRN2-201ENST00000389413 ADGRL1O94910 1474 aa19.58■□□□□ 0.73
PTPRN2-201ENST00000389413 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.57■□□□□ 0.72
PTPRN2-201ENST00000389413 CAVIN1Q6NZI2 390 aaKnown RBP19.57■□□□□ 0.72
PTPRN2-201ENST00000389413 TTC5Q8N0Z6 440 aa19.57■□□□□ 0.72
PTPRN2-201ENST00000389413 TESK2Q96S53 571 aa19.57■□□□□ 0.72
PTPRN2-201ENST00000389413 CCDC9Q9Y3X0 531 aaKnown RBP19.57■□□□□ 0.72
PTPRN2-201ENST00000389413 ALDH1L2Q3SY69 923 aa19.57■□□□□ 0.72
PTPRN2-201ENST00000389413 KIAA0556O60303 1618 aa19.57■□□□□ 0.72
PTPRN2-201ENST00000389413 SURF6O75683 361 aaKnown RBP19.56■□□□□ 0.72
PTPRN2-201ENST00000389413 CCT4P50991 539 aaKnown RBP19.56■□□□□ 0.72
PTPRN2-201ENST00000389413 PZPP20742 1482 aa19.56■□□□□ 0.72
PTPRN2-201ENST00000389413 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
PTPRN2-201ENST00000389413 CCDC34Q96HJ3 373 aa19.56■□□□□ 0.72
PTPRN2-201ENST00000389413 VPS37CA5D8V6 355 aaPredicted RBP19.56■□□□□ 0.72
PTPRN2-201ENST00000389413 GOLGA6L19H0YKK7 550 aa19.56■□□□□ 0.72
PTPRN2-201ENST00000389413 MBD3O95983 291 aa19.56■□□□□ 0.72
PTPRN2-201ENST00000389413 CWC22Q9HCG8 908 aaKnown RBP19.56■□□□□ 0.72
PTPRN2-201ENST00000389413 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
PTPRN2-201ENST00000389413 NUTM2GQ5VZR2 741 aa19.55■□□□□ 0.72
PTPRN2-201ENST00000389413 IGHDP01880 384 aa19.54■□□□□ 0.72
PTPRN2-201ENST00000389413 C14orf93Q9H972 538 aaKnown RBP19.54■□□□□ 0.72
PTPRN2-201ENST00000389413 CNTROBQ8N137 903 aa19.54■□□□□ 0.72
PTPRN2-201ENST00000389413 BECN2A8MW95 431 aa19.54■□□□□ 0.72
PTPRN2-201ENST00000389413 PRPF40AO75400 957 aaKnown RBP19.54■□□□□ 0.72
PTPRN2-201ENST00000389413 RPAP2Q8IXW5 612 aaPredicted RBP19.54■□□□□ 0.72
PTPRN2-201ENST00000389413 DNMT1P26358 1616 aaKnown RBP19.54■□□□□ 0.72
PTPRN2-201ENST00000389413 NOS1P29475 1434 aa19.53■□□□□ 0.72
PTPRN2-201ENST00000389413 RRS1Q15050 365 aaKnown RBP19.53■□□□□ 0.72
PTPRN2-201ENST00000389413 CLASRPQ8N2M8 674 aaKnown RBP19.53■□□□□ 0.72
PTPRN2-201ENST00000389413 ASXL1Q8IXJ9 1541 aa19.53■□□□□ 0.72
PTPRN2-201ENST00000389413 NSD2O96028 1365 aa19.53■□□□□ 0.72
PTPRN2-201ENST00000389413 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.53■□□□□ 0.72
PTPRN2-201ENST00000389413 PER1O15534 1290 aaPredicted RBP19.52■□□□□ 0.72
PTPRN2-201ENST00000389413 LRRFIP1Q32MZ4 808 aaKnown RBP19.52■□□□□ 0.72
PTPRN2-201ENST00000389413 TEX14Q8IWB6 1497 aa19.52■□□□□ 0.72
PTPRN2-201ENST00000389413 DUOX2Q9NRD8 1548 aa19.52■□□□□ 0.72
PTPRN2-201ENST00000389413 TRIM27P14373 513 aa19.51■□□□□ 0.71
PTPRN2-201ENST00000389413 THUMPD2Q9BTF0 503 aaKnown RBP19.51■□□□□ 0.71
PTPRN2-201ENST00000389413 GRPEL1Q9HAV7 217 aa19.51■□□□□ 0.71
PTPRN2-201ENST00000389413 SHANK2Q9UPX8 1470 aa19.51■□□□□ 0.71
PTPRN2-201ENST00000389413 CCDC61Q9Y6R9 512 aa19.51■□□□□ 0.71
PTPRN2-201ENST00000389413 LRRCC1Q9C099 1032 aa19.51■□□□□ 0.71
PTPRN2-201ENST00000389413 UHRF1BP1Q6BDS2 1440 aa19.51■□□□□ 0.71
PTPRN2-201ENST00000389413 TBC1D2Q9BYX2 928 aa19.5■□□□□ 0.71
PTPRN2-201ENST00000389413 IFT57Q9NWB7 429 aa19.5■□□□□ 0.71
PTPRN2-201ENST00000389413 ABTB2Q8N961 1025 aa19.5■□□□□ 0.71
PTPRN2-201ENST00000389413 CCDC173Q0VFZ6 552 aa19.5■□□□□ 0.71
PTPRN2-201ENST00000389413 BICD2Q8TD16 824 aa19.5■□□□□ 0.71
PTPRN2-201ENST00000389413 CD109Q6YHK3 1445 aa19.49■□□□□ 0.71
PTPRN2-201ENST00000389413 RNF214Q8ND24 703 aa19.49■□□□□ 0.71
PTPRN2-201ENST00000389413 SYCP2Q9BX26 1530 aa19.49■□□□□ 0.71
PTPRN2-201ENST00000389413 PLCH2O75038 1416 aa19.49■□□□□ 0.71
PTPRN2-201ENST00000389413 NUDT16Q96DE0 195 aaKnown RBP19.49■□□□□ 0.71
PTPRN2-201ENST00000389413 RIC3Q7Z5B4 369 aa19.48■□□□□ 0.71
PTPRN2-201ENST00000389413 FANCAO15360 1455 aa19.48■□□□□ 0.71
PTPRN2-201ENST00000389413 HDGFL1Q5TGJ6 251 aa19.48■□□□□ 0.71
PTPRN2-201ENST00000389413 TOMM22Q9NS69 142 aa19.48■□□□□ 0.71
PTPRN2-201ENST00000389413 CCDC39Q9UFE4 941 aa19.48■□□□□ 0.71
PTPRN2-201ENST00000389413 IDI1Q13907 227 aa19.47■□□□□ 0.71
PTPRN2-201ENST00000389413 RAPGEF4Q8WZA2 1011 aa19.47■□□□□ 0.71
PTPRN2-201ENST00000389413 AIMP1Q12904 312 aaKnown RBP19.47■□□□□ 0.71
PTPRN2-201ENST00000389413 SAMD9Q5K651 1589 aa19.47■□□□□ 0.71
PTPRN2-201ENST00000389413 WAPLQ7Z5K2 1190 aa19.46■□□□□ 0.71
PTPRN2-201ENST00000389413 PSMA5P28066 241 aa19.46■□□□□ 0.71
PTPRN2-201ENST00000389413 FAM13BQ9NYF5 915 aa19.46■□□□□ 0.71
PTPRN2-201ENST00000389413 KIF21AQ7Z4S6 1674 aa19.45■□□□□ 0.7
PTPRN2-201ENST00000389413 CPLX2Q6PUV4 134 aaKnown RBP19.45■□□□□ 0.7
PTPRN2-201ENST00000389413 SRCIN1Q9C0H9 1055 aa19.45■□□□□ 0.7
PTPRN2-201ENST00000389413 EIF2AK4Q9P2K8 1649 aaKnown RBP19.45■□□□□ 0.7
PTPRN2-201ENST00000389413 KDM5BQ9UGL1 1544 aa19.44■□□□□ 0.7
PTPRN2-201ENST00000389413 TBC1D32Q96NH3 1257 aa19.44■□□□□ 0.7
PTPRN2-201ENST00000389413 ADGRL2O95490 1459 aa19.44■□□□□ 0.7
PTPRN2-201ENST00000389413 PLEKHH1Q9ULM0 1364 aa19.44■□□□□ 0.7
PTPRN2-201ENST00000389413 IL16Q14005 1332 aa19.44■□□□□ 0.7
PTPRN2-201ENST00000389413 LETM1O95202 739 aaPredicted RBP19.43■□□□□ 0.7
PTPRN2-201ENST00000389413 PLEKHO1Q53GL0 409 aaPredicted RBP19.43■□□□□ 0.7
PTPRN2-201ENST00000389413 RNF123Q5XPI4 1314 aa19.43■□□□□ 0.7
PTPRN2-201ENST00000389413 SASS6Q6UVJ0 657 aa19.43■□□□□ 0.7
PTPRN2-201ENST00000389413 FSD1Q9BTV5 496 aa19.43■□□□□ 0.7
PTPRN2-201ENST00000389413 PIK3C2GO75747 1445 aa19.43■□□□□ 0.7
PTPRN2-201ENST00000389413 C8orf34Q49A92 452 aa19.43■□□□□ 0.7
PTPRN2-201ENST00000389413 VSIG10Q8N0Z9 540 aa19.43■□□□□ 0.7
PTPRN2-201ENST00000389413 TSPY26PQ9H489 355 aa19.43■□□□□ 0.7
PTPRN2-201ENST00000389413 POLR3AO14802 1390 aaPredicted RBP19.42■□□□□ 0.7
PTPRN2-201ENST00000389413 CPLX1O14810 134 aa19.42■□□□□ 0.7
PTPRN2-201ENST00000389413 PCDHB15Q9Y5E8 787 aa19.42■□□□□ 0.7
PTPRN2-201ENST00000389413 ERC1Q8IUD2 1116 aa19.42■□□□□ 0.7
PTPRN2-201ENST00000389413 DISP1Q96F81 1524 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms