RNA–Protein interactions for RNA: ENST00000389231.9

USP5-202, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP5, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-202ENST00000389231 ATAD2Q6PL18 1390 aa15.31■□□□□ 0.04
USP5-202ENST00000389231 FTSJ3Q8IY81 847 aaKnown RBP15.3■□□□□ 0.04
USP5-202ENST00000389231 FBXO31Q5XUX0 539 aaPredicted RBP15.3■□□□□ 0.04
USP5-202ENST00000389231 SMC4Q9NTJ3 1288 aa15.3■□□□□ 0.04
USP5-202ENST00000389231 PTPRMP28827 1452 aa15.29■□□□□ 0.04
USP5-202ENST00000389231 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
USP5-202ENST00000389231 ADGRB2O60241 1585 aa15.28■□□□□ 0.04
USP5-202ENST00000389231 YTHDC2Q9H6S0 1430 aaKnown RBP15.28■□□□□ 0.04
USP5-202ENST00000389231 CDK19Q9BWU1 502 aa15.28■□□□□ 0.04
USP5-202ENST00000389231 TRIM27P14373 513 aa15.28■□□□□ 0.04
USP5-202ENST00000389231 RIPK4P57078 832 aa15.28■□□□□ 0.04
USP5-202ENST00000389231 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.04
USP5-202ENST00000389231 ZMYM3Q14202 1370 aa15.27■□□□□ 0.04
USP5-202ENST00000389231 DIAPH1O60610 1272 aaKnown RBP15.27■□□□□ 0.04
USP5-202ENST00000389231 CABP1Q9NZU7 370 aa15.27■□□□□ 0.04
USP5-202ENST00000389231 CD163L1Q9NR16 1453 aa15.27■□□□□ 0.03
USP5-202ENST00000389231 HDGFL2Q7Z4V5 671 aaPredicted RBP15.27■□□□□ 0.03
USP5-202ENST00000389231 IL16Q14005 1332 aa15.27■□□□□ 0.03
USP5-202ENST00000389231 BECN1Q14457 450 aa15.26■□□□□ 0.03
USP5-202ENST00000389231 NLRP1Q9C000 1473 aa15.26■□□□□ 0.03
USP5-202ENST00000389231 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
USP5-202ENST00000389231 PNPLA6Q8IY17 1366 aa15.25■□□□□ 0.03
USP5-202ENST00000389231 MED14O60244 1454 aa15.25■□□□□ 0.03
USP5-202ENST00000389231 SLKQ9H2G2 1235 aaPredicted RBP15.25■□□□□ 0.03
USP5-202ENST00000389231 UPF2Q9HAU5 1272 aaKnown RBP15.25■□□□□ 0.03
USP5-202ENST00000389231 NOB1Q9ULX3 412 aaKnown RBP15.25■□□□□ 0.03
USP5-202ENST00000389231 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
USP5-202ENST00000389231 ITPRIPQ8IWB1 547 aa15.24■□□□□ 0.03
USP5-202ENST00000389231 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
USP5-202ENST00000389231 DDX19BQ9UMR2 479 aa15.24■□□□□ 0.03
USP5-202ENST00000389231 TMEM131LA2VDJ0 1609 aa15.24■□□□□ 0.03
USP5-202ENST00000389231 PNNQ9H307 717 aaKnown RBP15.23■□□□□ 0.03
USP5-202ENST00000389231 HDAC1Q13547 482 aaPredicted RBP15.23■□□□□ 0.03
USP5-202ENST00000389231 FCHSD2O94868 740 aa15.22■□□□□ 0.03
USP5-202ENST00000389231 FBLN1P23142 703 aa15.22■□□□□ 0.03
USP5-202ENST00000389231 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
USP5-202ENST00000389231 RICTORQ6R327 1708 aa15.21■□□□□ 0.03
USP5-202ENST00000389231 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.21■□□□□ 0.03
USP5-202ENST00000389231 WAPLQ7Z5K2 1190 aa15.21■□□□□ 0.03
USP5-202ENST00000389231 TMEM57Q8N5G2 664 aa15.21■□□□□ 0.03
USP5-202ENST00000389231 POLKQ9UBT6 870 aa15.2■□□□□ 0.02
USP5-202ENST00000389231 EIF5BO60841 1220 aaKnown RBP15.2■□□□□ 0.02
USP5-202ENST00000389231 ZBTB40Q9NUA8 1239 aa15.2■□□□□ 0.02
USP5-202ENST00000389231 ALKQ9UM73 1620 aa15.19■□□□□ 0.02
USP5-202ENST00000389231 IPO8O15397 1037 aaKnown RBP15.19■□□□□ 0.02
USP5-202ENST00000389231 PRKAR2BP31323 418 aa15.19■□□□□ 0.02
USP5-202ENST00000389231 RSPH6AQ9H0K4 717 aa15.19■□□□□ 0.02
USP5-202ENST00000389231 VIRMAQ69YN4 1812 aaKnown RBP15.19■□□□□ 0.02
USP5-202ENST00000389231 PREX1Q8TCU6 1659 aa15.19■□□□□ 0.02
USP5-202ENST00000389231 SMC5Q8IY18 1101 aa15.18■□□□□ 0.02
USP5-202ENST00000389231 TBC1D2Q9BYX2 928 aa15.18■□□□□ 0.02
USP5-202ENST00000389231 FAM43AQ8N2R8 423 aa15.18■□□□□ 0.02
USP5-202ENST00000389231 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
USP5-202ENST00000389231 KIF16BQ96L93 1317 aa15.18■□□□□ 0.02
USP5-202ENST00000389231 MYO5BQ9ULV0 1848 aa15.18■□□□□ 0.02
USP5-202ENST00000389231 ALDH1L2Q3SY69 923 aa15.18■□□□□ 0.02
USP5-202ENST00000389231 PHACTR3Q96KR7 559 aa15.16■□□□□ 0.02
USP5-202ENST00000389231 CLTCQ00610 1675 aaKnown RBP15.16■□□□□ 0.02
USP5-202ENST00000389231 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
USP5-202ENST00000389231 HMOX1P09601 288 aa15.15■□□□□ 0.02
USP5-202ENST00000389231 C22orf23Q9BZE7 217 aa15.14■□□□□ 0.01
USP5-202ENST00000389231 MFAP1P55081 439 aaKnown RBP15.14■□□□□ 0.01
USP5-202ENST00000389231 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
USP5-202ENST00000389231 FAM69CQ0P6D2 419 aa15.14■□□□□ 0.01
USP5-202ENST00000389231 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
USP5-202ENST00000389231 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
USP5-202ENST00000389231 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
USP5-202ENST00000389231 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
USP5-202ENST00000389231 EMILIN1Q9Y6C2 1016 aa15.13■□□□□ 0.01
USP5-202ENST00000389231 FAM135BQ49AJ0 1406 aa15.13■□□□□ 0.01
USP5-202ENST00000389231 SPRYD3Q8NCJ5 442 aa15.13■□□□□ 0.01
USP5-202ENST00000389231 ANKRD26Q9UPS8 1709 aa15.12■□□□□ 0.01
USP5-202ENST00000389231 VAMP4O75379 141 aa15.12■□□□□ 0.01
USP5-202ENST00000389231 NUCB1Q02818 461 aa15.12■□□□□ 0.01
USP5-202ENST00000389231 L1TD1Q5T7N2 865 aaKnown RBP15.12■□□□□ 0.01
USP5-202ENST00000389231 IL13P35225 146 aa15.12■□□□□ 0.01
USP5-202ENST00000389231 A2ML1A8K2U0 1454 aa15.11■□□□□ 0.01
USP5-202ENST00000389231 LRRC7Q96NW7 1537 aa15.11■□□□□ 0.01
USP5-202ENST00000389231 ATP7BP35670 1465 aa15.11■□□□□ 0.01
USP5-202ENST00000389231 RIMS2Q9UQ26 1411 aa15.11■□□□□ 0.01
USP5-202ENST00000389231 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
USP5-202ENST00000389231 NME9Q86XW9 330 aa15.11■□□□□ 0.01
USP5-202ENST00000389231 TSPYL6Q8N831 410 aa15.11■□□□□ 0.01
USP5-202ENST00000389231 ARXQ96QS3 562 aa15.11■□□□□ 0.01
USP5-202ENST00000389231 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
USP5-202ENST00000389231 CDC42BPGQ6DT37 1551 aa15.1■□□□□ 0.01
USP5-202ENST00000389231 ZBTB7BO15156 539 aaPredicted RBP15.1■□□□□ 0.01
USP5-202ENST00000389231 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
USP5-202ENST00000389231 LNPKQ9C0E8 428 aa15.1■□□□□ 0.01
USP5-202ENST00000389231 DLC1Q96QB1 1528 aa15.1■□□□□ 0.01
USP5-202ENST00000389231 CALD1Q05682 793 aaKnown RBP15.1■□□□□ 0.01
USP5-202ENST00000389231 PPIP5K1Q6PFW1 1433 aa15.1■□□□□ 0.01
USP5-202ENST00000389231 ELL2O00472 640 aaPredicted RBP15.09■□□□□ 0.01
USP5-202ENST00000389231 GNAI1P63096 354 aa15.09■□□□□ 0.01
USP5-202ENST00000389231 MLECQ14165 292 aa15.09■□□□□ 0.01
USP5-202ENST00000389231 CHD1LQ86WJ1 897 aa15.09■□□□□ 0.01
USP5-202ENST00000389231 ARHGAP45Q92619 1136 aa15.09■□□□□ 0.01
USP5-202ENST00000389231 IFT57Q9NWB7 429 aa15.09■□□□□ 0.01
USP5-202ENST00000389231 CPSF1Q10570 1443 aaKnown RBP15.09■□□□□ 0.01
USP5-202ENST00000389231 ZNF853P0CG23 659 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms