RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 RUNDC1Q96C34 613 aa13.34□□□□□ -0.27
LTN1-203ENST00000389195 CPS1P31327 1500 aa13.34□□□□□ -0.27
LTN1-203ENST00000389195 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.34□□□□□ -0.27
LTN1-203ENST00000389195 PHACTR3Q96KR7 559 aa13.33□□□□□ -0.27
LTN1-203ENST00000389195 C14orf37Q86TY3 774 aa13.33□□□□□ -0.28
LTN1-203ENST00000389195 DIAPH1O60610 1272 aaKnown RBP13.33□□□□□ -0.28
LTN1-203ENST00000389195 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
LTN1-203ENST00000389195 NGDNQ8NEJ9 315 aaKnown RBP13.33□□□□□ -0.28
LTN1-203ENST00000389195 HSPA2P54652 639 aa13.32□□□□□ -0.28
LTN1-203ENST00000389195 LAS1LQ9Y4W2 734 aaKnown RBP13.32□□□□□ -0.28
LTN1-203ENST00000389195 SHPRHQ149N8 1683 aa13.32□□□□□ -0.28
LTN1-203ENST00000389195 FRAT1Q92837 279 aaPredicted RBP13.32□□□□□ -0.28
LTN1-203ENST00000389195 COG3Q96JB2 828 aa13.31□□□□□ -0.28
LTN1-203ENST00000389195 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
LTN1-203ENST00000389195 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
LTN1-203ENST00000389195 ANKLE2Q86XL3 938 aa13.3□□□□□ -0.28
LTN1-203ENST00000389195 AEBP1Q8IUX7 1158 aa13.3□□□□□ -0.28
LTN1-203ENST00000389195 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
LTN1-203ENST00000389195 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
LTN1-203ENST00000389195 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
LTN1-203ENST00000389195 PLEKHF1Q96S99 279 aa13.3□□□□□ -0.28
LTN1-203ENST00000389195 RIPK4P57078 832 aa13.29□□□□□ -0.28
LTN1-203ENST00000389195 DCTN1Q14203 1278 aa13.29□□□□□ -0.28
LTN1-203ENST00000389195 CLUAP1Q96AJ1 413 aa13.29□□□□□ -0.28
LTN1-203ENST00000389195 ATP7BP35670 1465 aa13.29□□□□□ -0.28
LTN1-203ENST00000389195 TCERG1O14776 1098 aaKnown RBP13.29□□□□□ -0.28
LTN1-203ENST00000389195 CPSF1Q10570 1443 aaKnown RBP13.29□□□□□ -0.28
LTN1-203ENST00000389195 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
LTN1-203ENST00000389195 NKTRP30414 1462 aaKnown RBP13.29□□□□□ -0.28
LTN1-203ENST00000389195 FAM83GA6ND36 823 aa13.28□□□□□ -0.28
LTN1-203ENST00000389195 DLC1Q96QB1 1528 aa13.28□□□□□ -0.28
LTN1-203ENST00000389195 RGPD8O14715 1765 aaPredicted RBP13.28□□□□□ -0.28
LTN1-203ENST00000389195 TMPOP42166 694 aaKnown RBP13.28□□□□□ -0.28
LTN1-203ENST00000389195 PANK1Q8TE04 598 aa13.28□□□□□ -0.28
LTN1-203ENST00000389195 TRIM35Q9UPQ4 493 aa13.28□□□□□ -0.28
LTN1-203ENST00000389195 RBM19Q9Y4C8 960 aaKnown RBP13.28□□□□□ -0.28
LTN1-203ENST00000389195 ELL2O00472 640 aaPredicted RBP13.27□□□□□ -0.28
LTN1-203ENST00000389195 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.28
LTN1-203ENST00000389195 FAM135BQ49AJ0 1406 aa13.27□□□□□ -0.29
LTN1-203ENST00000389195 TRMT2AQ8IZ69 625 aaKnown RBP13.27□□□□□ -0.29
LTN1-203ENST00000389195 MAP2P11137 1827 aaKnown RBP13.27□□□□□ -0.29
LTN1-203ENST00000389195 MED14O60244 1454 aa13.27□□□□□ -0.29
LTN1-203ENST00000389195 LTV1Q96GA3 475 aaPredicted RBP13.26□□□□□ -0.29
LTN1-203ENST00000389195 MAPK8IP3Q9UPT6 1336 aa13.26□□□□□ -0.29
LTN1-203ENST00000389195 TECPR2O15040 1411 aa13.26□□□□□ -0.29
LTN1-203ENST00000389195 E9PSI1 815 aa13.26□□□□□ -0.29
LTN1-203ENST00000389195 DDX17Q92841 729 aaKnown RBP13.26□□□□□ -0.29
LTN1-203ENST00000389195 NSD2O96028 1365 aa13.26□□□□□ -0.29
LTN1-203ENST00000389195 LMOD2Q6P5Q4 547 aa13.26□□□□□ -0.29
LTN1-203ENST00000389195 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
LTN1-203ENST00000389195 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
LTN1-203ENST00000389195 CEP170BQ9Y4F5 1589 aaPredicted RBP13.25□□□□□ -0.29
LTN1-203ENST00000389195 ESCO1Q5FWF5 840 aa13.25□□□□□ -0.29
LTN1-203ENST00000389195 EDC4Q6P2E9 1401 aaKnown RBP13.24□□□□□ -0.29
LTN1-203ENST00000389195 NLRP6P59044 892 aa13.24□□□□□ -0.29
LTN1-203ENST00000389195 SLIT1O75093 1534 aa13.24□□□□□ -0.29
LTN1-203ENST00000389195 IL13P35225 146 aa13.24□□□□□ -0.29
LTN1-203ENST00000389195 SIRT1Q96EB6 747 aa13.24□□□□□ -0.29
LTN1-203ENST00000389195 RSPH6AQ9H0K4 717 aa13.24□□□□□ -0.29
LTN1-203ENST00000389195 COG6Q9Y2V7 657 aa13.24□□□□□ -0.29
LTN1-203ENST00000389195 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
LTN1-203ENST00000389195 FOXO3O43524 673 aa13.23□□□□□ -0.29
LTN1-203ENST00000389195 CANXP27824 592 aaKnown RBP13.23□□□□□ -0.29
LTN1-203ENST00000389195 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
LTN1-203ENST00000389195 SULT6B1Q6IMI4 303 aa13.23□□□□□ -0.29
LTN1-203ENST00000389195 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
LTN1-203ENST00000389195 USP32Q8NFA0 1604 aa13.23□□□□□ -0.29
LTN1-203ENST00000389195 INSRP06213 1382 aa13.22□□□□□ -0.29
LTN1-203ENST00000389195 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
LTN1-203ENST00000389195 SETD1BQ9UPS6 1966 aaKnown RBP13.22□□□□□ -0.29
LTN1-203ENST00000389195 PLEKHG3A1L390 1219 aa13.22□□□□□ -0.29
LTN1-203ENST00000389195 RLBP1P12271 317 aa13.22□□□□□ -0.29
LTN1-203ENST00000389195 EIF4A2Q14240 407 aaKnown RBP13.22□□□□□ -0.29
LTN1-203ENST00000389195 ERICH6BQ5W0A0 696 aa13.2□□□□□ -0.3
LTN1-203ENST00000389195 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
LTN1-203ENST00000389195 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
LTN1-203ENST00000389195 KIF20BQ96Q89 1820 aa13.2□□□□□ -0.3
LTN1-203ENST00000389195 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
LTN1-203ENST00000389195 FANCIQ9NVI1 1328 aa13.2□□□□□ -0.3
LTN1-203ENST00000389195 USP6P35125 1406 aa13.2□□□□□ -0.3
LTN1-203ENST00000389195 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
LTN1-203ENST00000389195 IQSEC2Q5JU85 1478 aa13.2□□□□□ -0.3
LTN1-203ENST00000389195 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
LTN1-203ENST00000389195 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
LTN1-203ENST00000389195 RARSP54136 660 aaKnown RBP13.19□□□□□ -0.3
LTN1-203ENST00000389195 KRT24Q2M2I5 525 aa13.19□□□□□ -0.3
LTN1-203ENST00000389195 MCM10Q7L590 875 aa13.19□□□□□ -0.3
LTN1-203ENST00000389195 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
LTN1-203ENST00000389195 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
LTN1-203ENST00000389195 FCHSD2O94868 740 aa13.18□□□□□ -0.3
LTN1-203ENST00000389195 AMPHP49418 695 aa13.18□□□□□ -0.3
LTN1-203ENST00000389195 DIP2AQ14689 1571 aa13.17□□□□□ -0.3
LTN1-203ENST00000389195 PSME1Q06323 249 aa13.17□□□□□ -0.3
LTN1-203ENST00000389195 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
LTN1-203ENST00000389195 KNDC1Q76NI1 1749 aa13.17□□□□□ -0.3
LTN1-203ENST00000389195 LRRC7Q96NW7 1537 aa13.16□□□□□ -0.3
LTN1-203ENST00000389195 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
LTN1-203ENST00000389195 BCL11AQ9H165 835 aa13.16□□□□□ -0.3
LTN1-203ENST00000389195 SSH1Q8WYL5 1049 aa13.16□□□□□ -0.3
LTN1-203ENST00000389195 ADAMTSL3P82987 1691 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms