RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SENP3Q9H4L4 574 aaPredicted RBP19.27■□□□□ 0.68
SCFD2-201ENST00000388940 CABP1Q9NZU7 370 aa19.27■□□□□ 0.68
SCFD2-201ENST00000388940 CDC42BPGQ6DT37 1551 aa19.27■□□□□ 0.68
SCFD2-201ENST00000388940 NRXN3Q9Y4C0 1643 aa19.27■□□□□ 0.67
SCFD2-201ENST00000388940 TMPOP42166 694 aaKnown RBP19.27■□□□□ 0.67
SCFD2-201ENST00000388940 PNNQ9H307 717 aaKnown RBP19.27■□□□□ 0.67
SCFD2-201ENST00000388940 VIRMAQ69YN4 1812 aaKnown RBP19.26■□□□□ 0.67
SCFD2-201ENST00000388940 IL16Q14005 1332 aa19.26■□□□□ 0.67
SCFD2-201ENST00000388940 FRAT1Q92837 279 aaPredicted RBP19.25■□□□□ 0.67
SCFD2-201ENST00000388940 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.25■□□□□ 0.67
SCFD2-201ENST00000388940 U2SURPO15042 1029 aaKnown RBP19.24■□□□□ 0.67
SCFD2-201ENST00000388940 DIAPH1O60610 1272 aaKnown RBP19.24■□□□□ 0.67
SCFD2-201ENST00000388940 TRIM35Q9UPQ4 493 aa19.24■□□□□ 0.67
SCFD2-201ENST00000388940 KNDC1Q76NI1 1749 aa19.23■□□□□ 0.67
SCFD2-201ENST00000388940 MAPK8IP3Q9UPT6 1336 aa19.23■□□□□ 0.67
SCFD2-201ENST00000388940 KIF13AQ9H1H9 1805 aa19.23■□□□□ 0.67
SCFD2-201ENST00000388940 PMFBP1Q8TBY8 1022 aa19.23■□□□□ 0.67
SCFD2-201ENST00000388940 RGS3P49796 1198 aa19.22■□□□□ 0.67
SCFD2-201ENST00000388940 WAPLQ7Z5K2 1190 aa19.22■□□□□ 0.67
SCFD2-201ENST00000388940 SIRT1Q96EB6 747 aa19.22■□□□□ 0.67
SCFD2-201ENST00000388940 RLBP1P12271 317 aa19.21■□□□□ 0.67
SCFD2-201ENST00000388940 CPSF1Q10570 1443 aaKnown RBP19.21■□□□□ 0.67
SCFD2-201ENST00000388940 ZMYM3Q14202 1370 aa19.2■□□□□ 0.66
SCFD2-201ENST00000388940 NBR1Q14596 966 aa19.2■□□□□ 0.66
SCFD2-201ENST00000388940 FCHSD2O94868 740 aa19.2■□□□□ 0.66
SCFD2-201ENST00000388940 MAP2P11137 1827 aaKnown RBP19.2■□□□□ 0.66
SCFD2-201ENST00000388940 TECPR2O15040 1411 aa19.19■□□□□ 0.66
SCFD2-201ENST00000388940 FAM135BQ49AJ0 1406 aa19.19■□□□□ 0.66
SCFD2-201ENST00000388940 ZKSCAN2Q63HK3 967 aa19.19■□□□□ 0.66
SCFD2-201ENST00000388940 EDC4Q6P2E9 1401 aaKnown RBP19.19■□□□□ 0.66
SCFD2-201ENST00000388940 HDGFP51858 240 aaKnown RBP19.19■□□□□ 0.66
SCFD2-201ENST00000388940 MLECQ14165 292 aa19.19■□□□□ 0.66
SCFD2-201ENST00000388940 WASLO00401 505 aaPredicted RBP19.18■□□□□ 0.66
SCFD2-201ENST00000388940 BCL2L13Q9BXK5 485 aa19.17■□□□□ 0.66
SCFD2-201ENST00000388940 RIPK4P57078 832 aa19.17■□□□□ 0.66
SCFD2-201ENST00000388940 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
SCFD2-201ENST00000388940 POLKQ9UBT6 870 aa19.17■□□□□ 0.66
SCFD2-201ENST00000388940 TNNQ9UQP3 1299 aa19.17■□□□□ 0.66
SCFD2-201ENST00000388940 METP08581 1390 aa19.17■□□□□ 0.66
SCFD2-201ENST00000388940 EXOSC9Q06265 439 aaKnown RBP19.16■□□□□ 0.66
SCFD2-201ENST00000388940 TSR2Q969E8 191 aaKnown RBP19.16■□□□□ 0.66
SCFD2-201ENST00000388940 PCDHB15Q9Y5E8 787 aa19.16■□□□□ 0.66
SCFD2-201ENST00000388940 CPS1P31327 1500 aa19.16■□□□□ 0.66
SCFD2-201ENST00000388940 LRRC7Q96NW7 1537 aa19.15■□□□□ 0.66
SCFD2-201ENST00000388940 MON2Q7Z3U7 1717 aa19.15■□□□□ 0.66
SCFD2-201ENST00000388940 PPM1GO15355 546 aaPredicted RBP19.15■□□□□ 0.66
SCFD2-201ENST00000388940 ESF1Q9H501 851 aaKnown RBP19.15■□□□□ 0.66
SCFD2-201ENST00000388940 PPIP5K1Q6PFW1 1433 aa19.15■□□□□ 0.66
SCFD2-201ENST00000388940 DZIP1LQ8IYY4 767 aaKnown RBP19.15■□□□□ 0.66
SCFD2-201ENST00000388940 RWDD1Q9H446 243 aaPredicted RBP19.15■□□□□ 0.66
SCFD2-201ENST00000388940 AATKQ6ZMQ8 1374 aa19.14■□□□□ 0.65
SCFD2-201ENST00000388940 RTL5Q5HYW3 569 aaPredicted RBP19.14■□□□□ 0.65
SCFD2-201ENST00000388940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.14■□□□□ 0.65
SCFD2-201ENST00000388940 RSPH6AQ9H0K4 717 aa19.13■□□□□ 0.65
SCFD2-201ENST00000388940 USP35Q9P2H5 1018 aa19.13■□□□□ 0.65
SCFD2-201ENST00000388940 AKAP12Q02952 1782 aa19.13■□□□□ 0.65
SCFD2-201ENST00000388940 UBR1Q8IWV7 1749 aa19.12■□□□□ 0.65
SCFD2-201ENST00000388940 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
SCFD2-201ENST00000388940 TNRQ92752 1358 aa19.12■□□□□ 0.65
SCFD2-201ENST00000388940 DEKP35659 375 aaKnown RBP19.12■□□□□ 0.65
SCFD2-201ENST00000388940 CDK12Q9NYV4 1490 aaPredicted RBP19.11■□□□□ 0.65
SCFD2-201ENST00000388940 FTSJ3Q8IY81 847 aaKnown RBP19.11■□□□□ 0.65
SCFD2-201ENST00000388940 SSH1Q8WYL5 1049 aa19.11■□□□□ 0.65
SCFD2-201ENST00000388940 NUDT16Q96DE0 195 aaKnown RBP19.1■□□□□ 0.65
SCFD2-201ENST00000388940 NEFMP07197 916 aa19.1■□□□□ 0.65
SCFD2-201ENST00000388940 CCDC61Q9Y6R9 512 aa19.1■□□□□ 0.65
SCFD2-201ENST00000388940 ITSN1Q15811 1721 aa19.1■□□□□ 0.65
SCFD2-201ENST00000388940 C3P01024 1663 aa19.1■□□□□ 0.65
SCFD2-201ENST00000388940 PRKAR2BP31323 418 aa19.09■□□□□ 0.65
SCFD2-201ENST00000388940 ALDH1L2Q3SY69 923 aa19.09■□□□□ 0.65
SCFD2-201ENST00000388940 ATF7IPQ6VMQ6 1270 aa19.09■□□□□ 0.65
SCFD2-201ENST00000388940 TXNDC2Q86VQ3 553 aa19.09■□□□□ 0.65
SCFD2-201ENST00000388940 ZNF428Q96B54 188 aa19.09■□□□□ 0.65
SCFD2-201ENST00000388940 TMEM2Q9UHN6 1383 aa19.09■□□□□ 0.65
SCFD2-201ENST00000388940 TRIM27P14373 513 aa19.09■□□□□ 0.65
SCFD2-201ENST00000388940 DDX19BQ9UMR2 479 aa19.09■□□□□ 0.65
SCFD2-201ENST00000388940 PDZRN3Q9UPQ7 1066 aa19.08■□□□□ 0.65
SCFD2-201ENST00000388940 IL13P35225 146 aa19.08■□□□□ 0.64
SCFD2-201ENST00000388940 BRPF1P55201 1214 aaPredicted RBP19.08■□□□□ 0.64
SCFD2-201ENST00000388940 KIF16BQ96L93 1317 aa19.07■□□□□ 0.64
SCFD2-201ENST00000388940 NFE2L2Q16236 605 aa19.07■□□□□ 0.64
SCFD2-201ENST00000388940 ZNF692Q9BU19 519 aaPredicted RBP19.07■□□□□ 0.64
SCFD2-201ENST00000388940 IPO8O15397 1037 aaKnown RBP19.06■□□□□ 0.64
SCFD2-201ENST00000388940 NME9Q86XW9 330 aa19.06■□□□□ 0.64
SCFD2-201ENST00000388940 LAS1LQ9Y4W2 734 aaKnown RBP19.06■□□□□ 0.64
SCFD2-201ENST00000388940 USP19O94966 1318 aa19.06■□□□□ 0.64
SCFD2-201ENST00000388940 CALD1Q05682 793 aaKnown RBP19.06■□□□□ 0.64
SCFD2-201ENST00000388940 HDAC1Q13547 482 aaPredicted RBP19.06■□□□□ 0.64
SCFD2-201ENST00000388940 DAXXQ9UER7 740 aaPredicted RBP19.06■□□□□ 0.64
SCFD2-201ENST00000388940 NOB1Q9ULX3 412 aaKnown RBP19.06■□□□□ 0.64
SCFD2-201ENST00000388940 FBLN1P23142 703 aa19.05■□□□□ 0.64
SCFD2-201ENST00000388940 COG3Q96JB2 828 aa19.05■□□□□ 0.64
SCFD2-201ENST00000388940 EMILIN1Q9Y6C2 1016 aa19.05■□□□□ 0.64
SCFD2-201ENST00000388940 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
SCFD2-201ENST00000388940 PHACTR3Q96KR7 559 aa19.03■□□□□ 0.64
SCFD2-201ENST00000388940 DLG5Q8TDM6 1919 aa19.02■□□□□ 0.64
SCFD2-201ENST00000388940 TOPAZ1Q8N9V7 1692 aa19.02■□□□□ 0.64
SCFD2-201ENST00000388940 PLEKHG1Q9ULL1 1385 aa19.02■□□□□ 0.63
SCFD2-201ENST00000388940 ITPRIPQ8IWB1 547 aa19.01■□□□□ 0.63
SCFD2-201ENST00000388940 PRR36Q9H6K5 1346 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms