RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 GTF2E1P29083 439 aaPredicted RBP23.31■■□□□ 1.32
CSPG5-202ENST00000383738 CARD14Q9BXL6 1004 aa23.31■■□□□ 1.32
CSPG5-202ENST00000383738 C9orf78Q9NZ63 289 aaPredicted RBP23.31■■□□□ 1.32
CSPG5-202ENST00000383738 PRAG1Q86YV5 1406 aa23.3■■□□□ 1.32
CSPG5-202ENST00000383738 PHF8Q9UPP1 1060 aa23.3■■□□□ 1.32
CSPG5-202ENST00000383738 ABCC10Q5T3U5 1492 aa23.3■■□□□ 1.32
CSPG5-202ENST00000383738 TWISTNBQ3B726 338 aaPredicted RBP23.3■■□□□ 1.32
CSPG5-202ENST00000383738 MPNDQ8N594 471 aa23.3■■□□□ 1.32
CSPG5-202ENST00000383738 SCAF11Q99590 1463 aaKnown RBP23.3■■□□□ 1.32
CSPG5-202ENST00000383738 TMPOP42166 694 aaKnown RBP23.3■■□□□ 1.32
CSPG5-202ENST00000383738 ACEP12821 1306 aa23.29■■□□□ 1.32
CSPG5-202ENST00000383738 FAM177BA6PVY3 158 aa23.29■■□□□ 1.32
CSPG5-202ENST00000383738 ZNF530Q6P9A1 599 aaPredicted RBP23.29■■□□□ 1.32
CSPG5-202ENST00000383738 TOM1L2Q6ZVM7 507 aa23.29■■□□□ 1.32
CSPG5-202ENST00000383738 ZMYM3Q14202 1370 aa23.29■■□□□ 1.32
CSPG5-202ENST00000383738 YEATS2Q9ULM3 1422 aa23.29■■□□□ 1.32
CSPG5-202ENST00000383738 RILPL2Q969X0 211 aa23.29■■□□□ 1.32
CSPG5-202ENST00000383738 GORABQ5T7V8 394 aa23.28■■□□□ 1.32
CSPG5-202ENST00000383738 KAT6BQ8WYB5 2073 aa23.28■■□□□ 1.32
CSPG5-202ENST00000383738 FYB1O15117 783 aa23.28■■□□□ 1.32
CSPG5-202ENST00000383738 FAM83GA6ND36 823 aa23.27■■□□□ 1.32
CSPG5-202ENST00000383738 NOB1Q9ULX3 412 aaKnown RBP23.27■■□□□ 1.32
CSPG5-202ENST00000383738 HMMRO75330 724 aa23.27■■□□□ 1.32
CSPG5-202ENST00000383738 HSP90AB2PQ58FF8 381 aa23.26■■□□□ 1.31
CSPG5-202ENST00000383738 BCL11BQ9C0K0 894 aaPredicted RBP23.26■■□□□ 1.31
CSPG5-202ENST00000383738 KDM6BO15054 1643 aa23.26■■□□□ 1.31
CSPG5-202ENST00000383738 CHRNA2Q15822 529 aa23.26■■□□□ 1.31
CSPG5-202ENST00000383738 CHMP5Q9NZZ3 219 aa23.26■■□□□ 1.31
CSPG5-202ENST00000383738 R3HCC1Q9Y3T6 440 aaKnown RBP23.26■■□□□ 1.31
CSPG5-202ENST00000383738 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.26■■□□□ 1.31
CSPG5-202ENST00000383738 SLC4A2P04920 1241 aa23.26■■□□□ 1.31
CSPG5-202ENST00000383738 KCNA6P17658 529 aa23.25■■□□□ 1.31
CSPG5-202ENST00000383738 C22orf23Q9BZE7 217 aa23.25■■□□□ 1.31
CSPG5-202ENST00000383738 ZMYND15Q9H091 742 aa23.25■■□□□ 1.31
CSPG5-202ENST00000383738 PANK2Q9BZ23 570 aa23.24■■□□□ 1.31
CSPG5-202ENST00000383738 DDX19BQ9UMR2 479 aa23.24■■□□□ 1.31
CSPG5-202ENST00000383738 MBD5Q9P267 1494 aa23.24■■□□□ 1.31
CSPG5-202ENST00000383738 DNMT1P26358 1616 aaKnown RBP23.23■■□□□ 1.31
CSPG5-202ENST00000383738 CABLES1Q8TDN4 633 aa23.23■■□□□ 1.31
CSPG5-202ENST00000383738 ADAMTS2O95450 1211 aa23.22■■□□□ 1.31
CSPG5-202ENST00000383738 DDX11L8A8MPP1 907 aa23.22■■□□□ 1.31
CSPG5-202ENST00000383738 MEX3CQ5U5Q3 659 aaKnown RBP23.22■■□□□ 1.31
CSPG5-202ENST00000383738 UHRF1BP1LA0JNW5 1464 aa23.21■■□□□ 1.31
CSPG5-202ENST00000383738 CHD1O14646 1710 aa23.21■■□□□ 1.31
CSPG5-202ENST00000383738 RBM42Q9BTD8 480 aaKnown RBP23.21■■□□□ 1.31
CSPG5-202ENST00000383738 API5Q9BZZ5 524 aaKnown RBP23.2■■□□□ 1.3
CSPG5-202ENST00000383738 KIAA1211Q6ZU35 1233 aa23.19■■□□□ 1.3
CSPG5-202ENST00000383738 GAS2L2Q8NHY3 880 aa23.19■■□□□ 1.3
CSPG5-202ENST00000383738 PDZRN3Q9UPQ7 1066 aa23.19■■□□□ 1.3
CSPG5-202ENST00000383738 MRE11P49959 708 aa23.18■■□□□ 1.3
CSPG5-202ENST00000383738 HDGFL1Q5TGJ6 251 aa23.18■■□□□ 1.3
CSPG5-202ENST00000383738 RNF214Q8ND24 703 aa23.18■■□□□ 1.3
CSPG5-202ENST00000383738 RIMS2Q9UQ26 1411 aa23.18■■□□□ 1.3
CSPG5-202ENST00000383738 MYL6BP14649 208 aa23.18■■□□□ 1.3
CSPG5-202ENST00000383738 SLFN5Q08AF3 891 aa23.18■■□□□ 1.3
CSPG5-202ENST00000383738 RIC3Q7Z5B4 369 aa23.18■■□□□ 1.3
CSPG5-202ENST00000383738 AEBP1Q8IUX7 1158 aa23.18■■□□□ 1.3
CSPG5-202ENST00000383738 FCHSD2O94868 740 aa23.17■■□□□ 1.3
CSPG5-202ENST00000383738 NEXNQ0ZGT2 675 aa23.17■■□□□ 1.3
CSPG5-202ENST00000383738 PTCD1O75127 700 aaKnown RBP23.17■■□□□ 1.3
CSPG5-202ENST00000383738 PLEKHO1Q53GL0 409 aaPredicted RBP23.17■■□□□ 1.3
CSPG5-202ENST00000383738 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
CSPG5-202ENST00000383738 PPP6R1Q9UPN7 881 aa23.16■■□□□ 1.3
CSPG5-202ENST00000383738 ABCA8O94911 1581 aa23.16■■□□□ 1.3
CSPG5-202ENST00000383738 ESPNB1AK53 854 aa23.16■■□□□ 1.3
CSPG5-202ENST00000383738 KIF16BQ96L93 1317 aa23.16■■□□□ 1.3
CSPG5-202ENST00000383738 TEX14Q8IWB6 1497 aa23.16■■□□□ 1.3
CSPG5-202ENST00000383738 PER1O15534 1290 aaPredicted RBP23.15■■□□□ 1.3
CSPG5-202ENST00000383738 CDK11BP21127 795 aaKnown RBP23.15■■□□□ 1.3
CSPG5-202ENST00000383738 MCM4P33991 863 aa23.15■■□□□ 1.3
CSPG5-202ENST00000383738 ATP7AQ04656 1500 aa23.15■■□□□ 1.3
CSPG5-202ENST00000383738 LTKP29376 864 aa23.14■■□□□ 1.3
CSPG5-202ENST00000383738 NFE2L2Q16236 605 aa23.14■■□□□ 1.3
CSPG5-202ENST00000383738 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.29
CSPG5-202ENST00000383738 KRT28Q7Z3Y7 464 aa23.14■■□□□ 1.29
CSPG5-202ENST00000383738 RALGAPBQ86X10 1494 aa23.12■■□□□ 1.29
CSPG5-202ENST00000383738 SSH1Q8WYL5 1049 aa23.12■■□□□ 1.29
CSPG5-202ENST00000383738 DDX17Q92841 729 aaKnown RBP23.12■■□□□ 1.29
CSPG5-202ENST00000383738 MCTP1Q6DN14 999 aa23.11■■□□□ 1.29
CSPG5-202ENST00000383738 CHMP4AQ9BY43 222 aa23.11■■□□□ 1.29
CSPG5-202ENST00000383738 GRPEL1Q9HAV7 217 aa23.11■■□□□ 1.29
CSPG5-202ENST00000383738 NASPP49321 788 aaPredicted RBP23.11■■□□□ 1.29
CSPG5-202ENST00000383738 SHANK2Q9UPX8 1470 aa23.11■■□□□ 1.29
CSPG5-202ENST00000383738 KIAA2012Q0VF49 1180 aa23.11■■□□□ 1.29
CSPG5-202ENST00000383738 TTC37Q6PGP7 1564 aa23.1■■□□□ 1.29
CSPG5-202ENST00000383738 RRAGDQ9NQL2 400 aaPredicted RBP23.1■■□□□ 1.29
CSPG5-202ENST00000383738 ISY1Q9ULR0 285 aaKnown RBP23.1■■□□□ 1.29
CSPG5-202ENST00000383738 ANXA1P04083 346 aa23.09■■□□□ 1.29
CSPG5-202ENST00000383738 F6X3S4 739 aa23.09■■□□□ 1.29
CSPG5-202ENST00000383738 ARHGEF12Q9NZN5 1544 aa23.09■■□□□ 1.29
CSPG5-202ENST00000383738 DRC7Q8IY82 874 aa23.08■■□□□ 1.29
CSPG5-202ENST00000383738 WDR63Q8IWG1 891 aa23.08■■□□□ 1.29
CSPG5-202ENST00000383738 NPATQ14207 1427 aa23.08■■□□□ 1.28
CSPG5-202ENST00000383738 ATF7IPQ6VMQ6 1270 aa23.08■■□□□ 1.28
CSPG5-202ENST00000383738 TULP1O00294 542 aaPredicted RBP23.07■■□□□ 1.28
CSPG5-202ENST00000383738 CAVIN1Q6NZI2 390 aaKnown RBP23.07■■□□□ 1.28
CSPG5-202ENST00000383738 CCDC85AQ96PX6 553 aaPredicted RBP23.07■■□□□ 1.28
CSPG5-202ENST00000383738 ORAI2Q96SN7 254 aa23.07■■□□□ 1.28
CSPG5-202ENST00000383738 ADGRL2O95490 1459 aa23.07■■□□□ 1.28
CSPG5-202ENST00000383738 SEC24BO95487 1268 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms