RNA–Protein interactions for RNA: ENST00000381582.3

GABRB1-202, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 2

Gene GABRB1, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-202ENST00000381582 NGLY1Q96IV0 654 aa21.6■■□□□ 1.05
GABRB1-202ENST00000381582 ADAMTS2O95450 1211 aa21.58■■□□□ 1.05
GABRB1-202ENST00000381582 NLRP13Q86W25 1043 aa21.58■■□□□ 1.05
GABRB1-202ENST00000381582 C8orf37Q96NL8 207 aa21.58■■□□□ 1.05
GABRB1-202ENST00000381582 TRPM3Q9HCF6 1732 aaPredicted RBP21.58■■□□□ 1.04
GABRB1-202ENST00000381582 USP6P35125 1406 aa21.57■■□□□ 1.04
GABRB1-202ENST00000381582 ABTB2Q8N961 1025 aa21.57■■□□□ 1.04
GABRB1-202ENST00000381582 TMC1Q8TDI8 760 aa21.57■■□□□ 1.04
GABRB1-202ENST00000381582 TTC21AQ8NDW8 1320 aa21.56■■□□□ 1.04
GABRB1-202ENST00000381582 ALS2Q96Q42 1657 aa21.54■■□□□ 1.04
GABRB1-202ENST00000381582 KTN1Q86UP2 1357 aaKnown RBP21.54■■□□□ 1.04
GABRB1-202ENST00000381582 CPSF1Q10570 1443 aaKnown RBP21.54■■□□□ 1.04
GABRB1-202ENST00000381582 AFF2P51816 1311 aa21.54■■□□□ 1.04
GABRB1-202ENST00000381582 SOCS7O14512 581 aa21.53■■□□□ 1.04
GABRB1-202ENST00000381582 FNBP4Q8N3X1 1017 aaPredicted RBP21.53■■□□□ 1.04
GABRB1-202ENST00000381582 USP21Q9UK80 565 aa21.51■■□□□ 1.03
GABRB1-202ENST00000381582 TRPC5Q9UL62 973 aaPredicted RBP21.5■■□□□ 1.03
GABRB1-202ENST00000381582 ILDR2Q71H61 639 aa21.49■■□□□ 1.03
GABRB1-202ENST00000381582 RGS17Q9UGC6 210 aaPredicted RBP21.49■■□□□ 1.03
GABRB1-202ENST00000381582 TTC21BQ7Z4L5 1316 aa21.49■■□□□ 1.03
GABRB1-202ENST00000381582 NLRP6P59044 892 aa21.48■■□□□ 1.03
GABRB1-202ENST00000381582 KCNH5Q8NCM2 988 aa21.48■■□□□ 1.03
GABRB1-202ENST00000381582 SLC12A5Q9H2X9 1139 aa21.48■■□□□ 1.03
GABRB1-202ENST00000381582 MARF1Q9Y4F3 1742 aaKnown RBP21.48■■□□□ 1.03
GABRB1-202ENST00000381582 EDC4Q6P2E9 1401 aaKnown RBP21.47■■□□□ 1.03
GABRB1-202ENST00000381582 HSPA5P11021 654 aaKnown RBP21.47■■□□□ 1.03
GABRB1-202ENST00000381582 RXRBP28702 533 aa21.47■■□□□ 1.03
GABRB1-202ENST00000381582 CABLES1Q8TDN4 633 aa21.47■■□□□ 1.03
GABRB1-202ENST00000381582 SSH2Q76I76 1423 aa21.46■■□□□ 1.03
GABRB1-202ENST00000381582 AKAP12Q02952 1782 aa21.46■■□□□ 1.03
GABRB1-202ENST00000381582 QTRT2Q9H974 415 aaKnown RBP21.46■■□□□ 1.03
GABRB1-202ENST00000381582 USP19O94966 1318 aa21.46■■□□□ 1.03
GABRB1-202ENST00000381582 ANKRD36BQ8N2N9 1353 aa21.46■■□□□ 1.03
GABRB1-202ENST00000381582 PRDM11Q9NQV5 511 aa21.45■■□□□ 1.02
GABRB1-202ENST00000381582 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
GABRB1-202ENST00000381582 RBM6P78332 1123 aaKnown RBP21.44■■□□□ 1.02
GABRB1-202ENST00000381582 UNC5CLQ8IV45 518 aa21.44■■□□□ 1.02
GABRB1-202ENST00000381582 POTEAQ6S8J7 498 aa21.43■■□□□ 1.02
GABRB1-202ENST00000381582 A0A1W2PP64 1363 aa21.42■■□□□ 1.02
GABRB1-202ENST00000381582 CPDO75976 1380 aa21.42■■□□□ 1.02
GABRB1-202ENST00000381582 SLIT2O94813 1529 aa21.42■■□□□ 1.02
GABRB1-202ENST00000381582 GCP02774 474 aa21.42■■□□□ 1.02
GABRB1-202ENST00000381582 NUTM2GQ5VZR2 741 aa21.42■■□□□ 1.02
GABRB1-202ENST00000381582 MON2Q7Z3U7 1717 aa21.42■■□□□ 1.02
GABRB1-202ENST00000381582 ABCA3Q99758 1704 aa21.42■■□□□ 1.02
GABRB1-202ENST00000381582 CDK12Q9NYV4 1490 aaPredicted RBP21.41■■□□□ 1.02
GABRB1-202ENST00000381582 CD163L1Q9NR16 1453 aa21.4■■□□□ 1.02
GABRB1-202ENST00000381582 USP31Q70CQ4 1352 aa21.4■■□□□ 1.02
GABRB1-202ENST00000381582 COL14A1Q05707 1796 aaKnown RBP21.4■■□□□ 1.02
GABRB1-202ENST00000381582 NWD2Q9ULI1 1742 aa21.39■■□□□ 1.01
GABRB1-202ENST00000381582 FAM83GA6ND36 823 aa21.39■■□□□ 1.01
GABRB1-202ENST00000381582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.39■■□□□ 1.01
GABRB1-202ENST00000381582 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.38■■□□□ 1.01
GABRB1-202ENST00000381582 PHRF1Q9P1Y6 1649 aaKnown RBP21.38■■□□□ 1.01
GABRB1-202ENST00000381582 NRKQ7Z2Y5 1582 aa21.38■■□□□ 1.01
GABRB1-202ENST00000381582 BCL9LQ86UU0 1499 aa21.38■■□□□ 1.01
GABRB1-202ENST00000381582 ATRNO75882 1429 aa21.38■■□□□ 1.01
GABRB1-202ENST00000381582 KIAA0232Q92628 1395 aa21.37■■□□□ 1.01
GABRB1-202ENST00000381582 VPS72Q15906 364 aa21.37■■□□□ 1.01
GABRB1-202ENST00000381582 CRYBG1Q9Y4K1 1723 aa21.37■■□□□ 1.01
GABRB1-202ENST00000381582 SLIT3O75094 1523 aa21.36■■□□□ 1.01
GABRB1-202ENST00000381582 ZC3H6P61129 1189 aaKnown RBP21.36■■□□□ 1.01
GABRB1-202ENST00000381582 BTG4Q9NY30 223 aa21.36■■□□□ 1.01
GABRB1-202ENST00000381582 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
GABRB1-202ENST00000381582 COG3Q96JB2 828 aa21.35■■□□□ 1.01
GABRB1-202ENST00000381582 GJD4Q96KN9 370 aaPredicted RBP21.35■■□□□ 1.01
GABRB1-202ENST00000381582 POLR3GLQ9BT43 218 aa21.35■■□□□ 1.01
GABRB1-202ENST00000381582 PIK3C2AO00443 1686 aa21.34■■□□□ 1.01
GABRB1-202ENST00000381582 EVA1CP58658 441 aa21.34■■□□□ 1.01
GABRB1-202ENST00000381582 CCDC9Q9Y3X0 531 aaKnown RBP21.34■■□□□ 1.01
GABRB1-202ENST00000381582 AATKQ6ZMQ8 1374 aa21.33■■□□□ 1
GABRB1-202ENST00000381582 PLCH1Q4KWH8 1693 aa21.32■■□□□ 1
GABRB1-202ENST00000381582 NME9Q86XW9 330 aa21.31■■□□□ 1
GABRB1-202ENST00000381582 CGNL1Q0VF96 1302 aa21.3■■□□□ 1
GABRB1-202ENST00000381582 USP54Q70EL1 1684 aa21.3■■□□□ 1
GABRB1-202ENST00000381582 ABCC6O95255 1503 aa21.29■■□□□ 1
GABRB1-202ENST00000381582 CHRNA2Q15822 529 aa21.28■■□□□ 1
GABRB1-202ENST00000381582 ARHGEF25Q86VW2 580 aa21.28■■□□□ 1
GABRB1-202ENST00000381582 ZBTB7CA1YPR0 619 aa21.27■■□□□ 1
GABRB1-202ENST00000381582 OVOS2A0A0J9YW53 1432 aa21.27■■□□□ 1
GABRB1-202ENST00000381582 OVOS2Q6IE36 1432 aa21.27■■□□□ 1
GABRB1-202ENST00000381582 FYB1O15117 783 aa21.25■□□□□ 0.99
GABRB1-202ENST00000381582 NSD3Q9BZ95 1437 aa21.25■□□□□ 0.99
GABRB1-202ENST00000381582 STRN4Q9NRL3 753 aa21.25■□□□□ 0.99
GABRB1-202ENST00000381582 THRAP3Q9Y2W1 955 aaKnown RBP21.25■□□□□ 0.99
GABRB1-202ENST00000381582 MYOM1P52179 1685 aa21.24■□□□□ 0.99
GABRB1-202ENST00000381582 SOX12O15370 315 aa21.24■□□□□ 0.99
GABRB1-202ENST00000381582 SPATA31A5Q5VU36 1347 aa21.24■□□□□ 0.99
GABRB1-202ENST00000381582 SPATA31A7Q8IWB4 1347 aa21.24■□□□□ 0.99
GABRB1-202ENST00000381582 NRAPQ86VF7 1730 aa21.23■□□□□ 0.99
GABRB1-202ENST00000381582 NSD2O96028 1365 aa21.23■□□□□ 0.99
GABRB1-202ENST00000381582 ONECUT3O60422 494 aaPredicted RBP21.22■□□□□ 0.99
GABRB1-202ENST00000381582 KNSTRNQ9Y448 316 aa21.22■□□□□ 0.99
GABRB1-202ENST00000381582 NFAT5O94916 1531 aa21.22■□□□□ 0.99
GABRB1-202ENST00000381582 KIF7Q2M1P5 1343 aa21.22■□□□□ 0.99
GABRB1-202ENST00000381582 LMO7Q8WWI1 1683 aa21.21■□□□□ 0.99
GABRB1-202ENST00000381582 RGS12O14924 1447 aa21.21■□□□□ 0.99
GABRB1-202ENST00000381582 PANK3Q9H999 370 aa21.21■□□□□ 0.99
GABRB1-202ENST00000381582 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
GABRB1-202ENST00000381582 A0A0G2JS52 829 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms