RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 ZC3H6P61129 1189 aaKnown RBP15.09■□□□□ 0.01
GABPB1-203ENST00000380877 PRDM11Q9NQV5 511 aa15.09■□□□□ 0.01
GABPB1-203ENST00000380877 REC8O95072 547 aa15.09■□□□□ 0.01
GABPB1-203ENST00000380877 KCNH5Q8NCM2 988 aa15.09■□□□□ 0.01
GABPB1-203ENST00000380877 DIAPH3Q9NSV4 1193 aa15.09■□□□□ 0.01
GABPB1-203ENST00000380877 FOXO3O43524 673 aa15.09■□□□□ 0.01
GABPB1-203ENST00000380877 HSP90AB4PQ58FF6 505 aa15.09■□□□□ 0.01
GABPB1-203ENST00000380877 ZNF428Q96B54 188 aa15.08■□□□□ 0
GABPB1-203ENST00000380877 RIMS2Q9UQ26 1411 aa15.08■□□□□ 0
GABPB1-203ENST00000380877 C1orf115Q9H7X2 142 aa15.07■□□□□ 0
GABPB1-203ENST00000380877 GZF1Q9H116 711 aaPredicted RBP15.07■□□□□ 0
GABPB1-203ENST00000380877 FRAT2O75474 233 aaPredicted RBP15.07■□□□□ 0
GABPB1-203ENST00000380877 MVPQ14764 893 aaKnown RBP15.07■□□□□ 0
GABPB1-203ENST00000380877 TOM1L2Q6ZVM7 507 aa15.07■□□□□ 0
GABPB1-203ENST00000380877 PDZRN3Q9UPQ7 1066 aa15.07■□□□□ 0
GABPB1-203ENST00000380877 DEKP35659 375 aaKnown RBP15.06■□□□□ 0
GABPB1-203ENST00000380877 TMX4Q9H1E5 349 aaPredicted RBP15.06■□□□□ 0
GABPB1-203ENST00000380877 PTMSP20962 102 aa15.06■□□□□ 0
GABPB1-203ENST00000380877 ABCC11Q96J66 1382 aa15.05■□□□□ 0
GABPB1-203ENST00000380877 GNL2Q13823 731 aaKnown RBP15.05■□□□□ 0
GABPB1-203ENST00000380877 ACEP12821 1306 aa15.05■□□□□ 0
GABPB1-203ENST00000380877 MBD5Q9P267 1494 aa15.05■□□□□ 0
GABPB1-203ENST00000380877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.05■□□□□ 02e-9■■■■■ 40.7
GABPB1-203ENST00000380877 HSP90B1P14625 803 aaKnown RBP15.05■□□□□ 0
GABPB1-203ENST00000380877 RUFY2Q8WXA3 655 aa15.05■□□□□ 0
GABPB1-203ENST00000380877 ANKRD36BQ8N2N9 1353 aa15.05■□□□□ -0
GABPB1-203ENST00000380877 EIF2AK4Q9P2K8 1649 aaKnown RBP15.05■□□□□ -0
GABPB1-203ENST00000380877 FYB1O15117 783 aa15.04■□□□□ -0
GABPB1-203ENST00000380877 DCTN1Q14203 1278 aa15.04■□□□□ -0
GABPB1-203ENST00000380877 UHRF1BP1Q6BDS2 1440 aa15.04■□□□□ -0
GABPB1-203ENST00000380877 L1TD1Q5T7N2 865 aaKnown RBP15.04■□□□□ -0
GABPB1-203ENST00000380877 SPG7Q9UQ90 795 aa15.04■□□□□ -0
GABPB1-203ENST00000380877 MCM10Q7L590 875 aa15.04■□□□□ -0
GABPB1-203ENST00000380877 ANO2Q9NQ90 1003 aa15.03■□□□□ -0
GABPB1-203ENST00000380877 SURF6O75683 361 aaKnown RBP15.03■□□□□ -0
GABPB1-203ENST00000380877 INTS3Q68E01 1043 aaKnown RBP15.03■□□□□ -0
GABPB1-203ENST00000380877 ISY1Q9ULR0 285 aaKnown RBP15.03■□□□□ -0
GABPB1-203ENST00000380877 PARD3Q8TEW0 1356 aa15.03■□□□□ -0
GABPB1-203ENST00000380877 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
GABPB1-203ENST00000380877 RARSP54136 660 aaKnown RBP15.03■□□□□ -0
GABPB1-203ENST00000380877 ZMYM3Q14202 1370 aa15.03■□□□□ -0
GABPB1-203ENST00000380877 MAST1Q9Y2H9 1570 aa15.03■□□□□ -0
GABPB1-203ENST00000380877 ASXL1Q8IXJ9 1541 aa15.03■□□□□ -0
GABPB1-203ENST00000380877 GNAI2P04899 355 aa15.02■□□□□ -0
GABPB1-203ENST00000380877 MEX3CQ5U5Q3 659 aaKnown RBP15.02■□□□□ -0
GABPB1-203ENST00000380877 DUSP27Q5VZP5 1158 aa15.02■□□□□ -0
GABPB1-203ENST00000380877 CCT4P50991 539 aaKnown RBP15.02□□□□□ -0.01
GABPB1-203ENST00000380877 FBLN1P23142 703 aa15.02□□□□□ -0.01
GABPB1-203ENST00000380877 DDX54Q8TDD1 881 aaKnown RBP15.02□□□□□ -0.01
GABPB1-203ENST00000380877 GCC1Q96CN9 775 aa15.02□□□□□ -0.01
GABPB1-203ENST00000380877 PUS7Q96PZ0 661 aaKnown RBP15.02□□□□□ -0.01
GABPB1-203ENST00000380877 SSH1Q8WYL5 1049 aa15.01□□□□□ -0.01
GABPB1-203ENST00000380877 CABP4P57796 275 aa15.01□□□□□ -0.01
GABPB1-203ENST00000380877 AEBP2Q6ZN18 517 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-203ENST00000380877 C22orf23Q9BZE7 217 aa15.01□□□□□ -0.01
GABPB1-203ENST00000380877 ARHGEF5Q12774 1597 aa15.01□□□□□ -0.01
GABPB1-203ENST00000380877 TOMM22Q9NS69 142 aa15.01□□□□□ -0.01
GABPB1-203ENST00000380877 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
GABPB1-203ENST00000380877 MIS18AQ9NYP9 233 aa15.01□□□□□ -0.01
GABPB1-203ENST00000380877 ERC2O15083 957 aa15.01□□□□□ -0.01
GABPB1-203ENST00000380877 NKTRP30414 1462 aaKnown RBP15□□□□□ -0.01
GABPB1-203ENST00000380877 LRRFIP1Q32MZ4 808 aaKnown RBP15□□□□□ -0.01
GABPB1-203ENST00000380877 C20orf194Q5TEA3 1177 aa15□□□□□ -0.01
GABPB1-203ENST00000380877 CLASRPQ8N2M8 674 aaKnown RBP15□□□□□ -0.01
GABPB1-203ENST00000380877 CDC45O75419 566 aa15□□□□□ -0.01
GABPB1-203ENST00000380877 ZKSCAN1P17029 563 aaPredicted RBP15□□□□□ -0.01
GABPB1-203ENST00000380877 ATP10AO60312 1499 aa15□□□□□ -0.01
GABPB1-203ENST00000380877 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-203ENST00000380877 USHBP1Q8N6Y0 703 aa14.99□□□□□ -0.01
GABPB1-203ENST00000380877 SRCIN1Q9C0H9 1055 aa14.99□□□□□ -0.01
GABPB1-203ENST00000380877 HTATSF1O43719 755 aaKnown RBP14.99□□□□□ -0.01
GABPB1-203ENST00000380877 TMEM57Q8N5G2 664 aa14.99□□□□□ -0.01
GABPB1-203ENST00000380877 NEO1Q92859 1461 aa14.99□□□□□ -0.01
GABPB1-203ENST00000380877 BTBD11A6QL63 1104 aa14.99□□□□□ -0.01
GABPB1-203ENST00000380877 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
GABPB1-203ENST00000380877 CARD14Q9BXL6 1004 aa14.99□□□□□ -0.01
GABPB1-203ENST00000380877 GCC2Q8IWJ2 1684 aa14.99□□□□□ -0.01
GABPB1-203ENST00000380877 FOXD4L5Q5VV16 416 aaPredicted RBP14.98□□□□□ -0.01
GABPB1-203ENST00000380877 FOXD4L4Q8WXT5 416 aaPredicted RBP14.98□□□□□ -0.01
GABPB1-203ENST00000380877 DNTTIP2Q5QJE6 756 aaKnown RBP14.98□□□□□ -0.01
GABPB1-203ENST00000380877 TTC21BQ7Z4L5 1316 aa14.98□□□□□ -0.01
GABPB1-203ENST00000380877 NEUROD6Q96NK8 337 aa14.97□□□□□ -0.01
GABPB1-203ENST00000380877 G3V3G9 751 aa14.97□□□□□ -0.01
GABPB1-203ENST00000380877 DCAF8Q5TAQ9 597 aa14.97□□□□□ -0.01
GABPB1-203ENST00000380877 SYAP1Q96A49 352 aaPredicted RBP14.97□□□□□ -0.01
GABPB1-203ENST00000380877 KIF3AQ9Y496 699 aa14.96□□□□□ -0.01
GABPB1-203ENST00000380877 PPIP5K1Q6PFW1 1433 aa14.96□□□□□ -0.01
GABPB1-203ENST00000380877 COL17A1Q9UMD9 1497 aaPredicted RBP14.96□□□□□ -0.01
GABPB1-203ENST00000380877 ALDH1L2Q3SY69 923 aa14.96□□□□□ -0.01
GABPB1-203ENST00000380877 KRT28Q7Z3Y7 464 aa14.96□□□□□ -0.02
GABPB1-203ENST00000380877 MSH5O43196 834 aa14.95□□□□□ -0.02
GABPB1-203ENST00000380877 MYO5CQ9NQX4 1742 aa14.95□□□□□ -0.02
GABPB1-203ENST00000380877 YTHDC2Q9H6S0 1430 aaKnown RBP14.95□□□□□ -0.02
GABPB1-203ENST00000380877 NUTM2BA6NNL0 878 aaPredicted RBP14.95□□□□□ -0.02
GABPB1-203ENST00000380877 NUTM2EB1AL46 878 aaPredicted RBP14.95□□□□□ -0.02
GABPB1-203ENST00000380877 NUTM2AQ8IVF1 878 aaPredicted RBP14.95□□□□□ -0.02
GABPB1-203ENST00000380877 CDK11BP21127 795 aaKnown RBP14.95□□□□□ -0.02
GABPB1-203ENST00000380877 TAF7Q15545 349 aaPredicted RBP14.95□□□□□ -0.02
GABPB1-203ENST00000380877 BACH2Q9BYV9 841 aa14.95□□□□□ -0.02
GABPB1-203ENST00000380877 ADGBQ8N7X0 1667 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms