RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
EIF3CL-201ENST00000380876 BAG4O95429 457 aaKnown RBP16.78■□□□□ 0.28
EIF3CL-201ENST00000380876 FOXD4L6Q3SYB3 417 aaPredicted RBP16.77■□□□□ 0.28
EIF3CL-201ENST00000380876 FOXD4L3Q6VB84 417 aaPredicted RBP16.77■□□□□ 0.28
EIF3CL-201ENST00000380876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.77■□□□□ 0.28
EIF3CL-201ENST00000380876 DUOX2Q9NRD8 1548 aa16.77■□□□□ 0.28
EIF3CL-201ENST00000380876 SNX21Q969T3 373 aa16.77■□□□□ 0.27
EIF3CL-201ENST00000380876 ATAD2Q6PL18 1390 aa16.77■□□□□ 0.27
EIF3CL-201ENST00000380876 GOLGA6L22H0YM25 854 aa16.76■□□□□ 0.27
EIF3CL-201ENST00000380876 ZSCAN30Q86W11 494 aa16.76■□□□□ 0.27
EIF3CL-201ENST00000380876 CEP152O94986 1710 aa16.76■□□□□ 0.27
EIF3CL-201ENST00000380876 PTPRTO14522 1441 aa16.76■□□□□ 0.27
EIF3CL-201ENST00000380876 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
EIF3CL-201ENST00000380876 CCDC173Q0VFZ6 552 aa16.76■□□□□ 0.27
EIF3CL-201ENST00000380876 SKOR2Q2VWA4 1001 aaPredicted RBP16.75■□□□□ 0.27
EIF3CL-201ENST00000380876 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
EIF3CL-201ENST00000380876 RNF214Q8ND24 703 aa16.75■□□□□ 0.27
EIF3CL-201ENST00000380876 CLTCL1P53675 1640 aa16.75■□□□□ 0.27
EIF3CL-201ENST00000380876 PLXNC1O60486 1568 aa16.75■□□□□ 0.27
EIF3CL-201ENST00000380876 PRPF40AO75400 957 aaKnown RBP16.74■□□□□ 0.27
EIF3CL-201ENST00000380876 TPM2P07951 284 aa16.74■□□□□ 0.27
EIF3CL-201ENST00000380876 RBSNQ9H1K0 784 aa16.74■□□□□ 0.27
EIF3CL-201ENST00000380876 CCDC27Q2M243 656 aa16.74■□□□□ 0.27
EIF3CL-201ENST00000380876 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
EIF3CL-201ENST00000380876 CALD1Q05682 793 aaKnown RBP16.73■□□□□ 0.27
EIF3CL-201ENST00000380876 PRIM1P49642 420 aaKnown RBP16.73■□□□□ 0.27
EIF3CL-201ENST00000380876 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
EIF3CL-201ENST00000380876 JARID2Q92833 1246 aaPredicted RBP16.73■□□□□ 0.27
EIF3CL-201ENST00000380876 PDCL3Q9H2J4 239 aa16.73■□□□□ 0.27
EIF3CL-201ENST00000380876 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
EIF3CL-201ENST00000380876 TSPYL6Q8N831 410 aa16.72■□□□□ 0.27
EIF3CL-201ENST00000380876 PRDM10Q9NQV6 1147 aa16.72■□□□□ 0.27
EIF3CL-201ENST00000380876 HMOX1P09601 288 aa16.72■□□□□ 0.27
EIF3CL-201ENST00000380876 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
EIF3CL-201ENST00000380876 CIZ1Q9ULV3 898 aaPredicted RBP16.72■□□□□ 0.27
EIF3CL-201ENST00000380876 NOS1P29475 1434 aa16.72■□□□□ 0.27
EIF3CL-201ENST00000380876 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
EIF3CL-201ENST00000380876 SRPK2P78362 688 aaKnown RBP16.71■□□□□ 0.27
EIF3CL-201ENST00000380876 ZSCAN23Q3MJ62 389 aa16.71■□□□□ 0.27
EIF3CL-201ENST00000380876 CD109Q6YHK3 1445 aa16.71■□□□□ 0.27
EIF3CL-201ENST00000380876 BMP2KLQ5H9B9 411 aa16.71■□□□□ 0.27
EIF3CL-201ENST00000380876 IPO8O15397 1037 aaKnown RBP16.71■□□□□ 0.26
EIF3CL-201ENST00000380876 CFAP65Q6ZU64 1925 aaKnown RBP16.71■□□□□ 0.26
EIF3CL-201ENST00000380876 ZNF518AQ6AHZ1 1483 aa16.7■□□□□ 0.26
EIF3CL-201ENST00000380876 OFD1O75665 1012 aa16.7■□□□□ 0.26
EIF3CL-201ENST00000380876 SIRT2Q8IXJ6 389 aa16.7■□□□□ 0.26
EIF3CL-201ENST00000380876 OTUD7AQ8TE49 926 aaPredicted RBP16.7■□□□□ 0.26
EIF3CL-201ENST00000380876 ISY1Q9ULR0 285 aaKnown RBP16.7■□□□□ 0.26
EIF3CL-201ENST00000380876 ZMYM3Q14202 1370 aa16.7■□□□□ 0.26
EIF3CL-201ENST00000380876 KLHL40Q2TBA0 621 aa16.7■□□□□ 0.26
EIF3CL-201ENST00000380876 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
EIF3CL-201ENST00000380876 NSFL1CQ9UNZ2 370 aaKnown RBP16.7■□□□□ 0.26
EIF3CL-201ENST00000380876 GGT6Q6P531 493 aa16.69■□□□□ 0.26
EIF3CL-201ENST00000380876 UQCRHLA0A096LP55 91 aa16.69■□□□□ 0.26
EIF3CL-201ENST00000380876 UQCRHP07919 91 aa16.69■□□□□ 0.26
EIF3CL-201ENST00000380876 PPP1R9BQ96SB3 815 aa16.69■□□□□ 0.26
EIF3CL-201ENST00000380876 KANK1Q14678 1352 aa16.68■□□□□ 0.26
EIF3CL-201ENST00000380876 SYCE3A1L190 88 aa16.68■□□□□ 0.26
EIF3CL-201ENST00000380876 GSPT1P15170 499 aaKnown RBP16.68■□□□□ 0.26
EIF3CL-201ENST00000380876 TSC1Q92574 1164 aa16.68■□□□□ 0.26
EIF3CL-201ENST00000380876 SPHKAPQ2M3C7 1700 aa16.68■□□□□ 0.26
EIF3CL-201ENST00000380876 ZBTB7BO15156 539 aaPredicted RBP16.67■□□□□ 0.26
EIF3CL-201ENST00000380876 SMARCA5O60264 1052 aaPredicted RBP16.67■□□□□ 0.26
EIF3CL-201ENST00000380876 PPIP5K1Q6PFW1 1433 aa16.67■□□□□ 0.26
EIF3CL-201ENST00000380876 TRPM2O94759 1503 aa16.66■□□□□ 0.26
EIF3CL-201ENST00000380876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.66■□□□□ 0.26
EIF3CL-201ENST00000380876 LMBRD1Q9NUN5 540 aa16.66■□□□□ 0.26
EIF3CL-201ENST00000380876 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.66■□□□□ 0.26
EIF3CL-201ENST00000380876 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
EIF3CL-201ENST00000380876 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.66■□□□□ 0.26
EIF3CL-201ENST00000380876 GPT2Q8TD30 523 aa16.66■□□□□ 0.26
EIF3CL-201ENST00000380876 FAM177BA6PVY3 158 aa16.65■□□□□ 0.26
EIF3CL-201ENST00000380876 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
EIF3CL-201ENST00000380876 MINK1Q8N4C8 1332 aaPredicted RBP16.65■□□□□ 0.26
EIF3CL-201ENST00000380876 ABCA6Q8N139 1617 aa16.65■□□□□ 0.26
EIF3CL-201ENST00000380876 SLC24A1O60721 1099 aa16.64■□□□□ 0.25
EIF3CL-201ENST00000380876 CDC45O75419 566 aa16.64■□□□□ 0.25
EIF3CL-201ENST00000380876 PHACTR3Q96KR7 559 aa16.64■□□□□ 0.25
EIF3CL-201ENST00000380876 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
EIF3CL-201ENST00000380876 ZNF830Q96NB3 372 aaPredicted RBP16.63■□□□□ 0.25
EIF3CL-201ENST00000380876 DIAPH1O60610 1272 aaKnown RBP16.63■□□□□ 0.25
EIF3CL-201ENST00000380876 DCTN1Q14203 1278 aa16.63■□□□□ 0.25
EIF3CL-201ENST00000380876 DTNBO60941 627 aa16.62■□□□□ 0.25
EIF3CL-201ENST00000380876 PTMAP06454 111 aaKnown RBP16.62■□□□□ 0.25
EIF3CL-201ENST00000380876 TMEM63CQ9P1W3 806 aa16.62■□□□□ 0.25
EIF3CL-201ENST00000380876 PLCH2O75038 1416 aa16.62■□□□□ 0.25
EIF3CL-201ENST00000380876 CT47B1P0C2W7 299 aaPredicted RBP16.61■□□□□ 0.25
EIF3CL-201ENST00000380876 GDPD2Q9HCC8 539 aa16.61■□□□□ 0.25
EIF3CL-201ENST00000380876 EVC2Q86UK5 1308 aa16.61■□□□□ 0.25
EIF3CL-201ENST00000380876 DNTTIP2Q5QJE6 756 aaKnown RBP16.61■□□□□ 0.25
EIF3CL-201ENST00000380876 FAM83GA6ND36 823 aa16.61■□□□□ 0.25
EIF3CL-201ENST00000380876 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
EIF3CL-201ENST00000380876 PLEKHM2Q8IWE5 1019 aa16.61■□□□□ 0.25
EIF3CL-201ENST00000380876 ZHX1Q9UKY1 873 aaPredicted RBP16.61■□□□□ 0.25
EIF3CL-201ENST00000380876 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
EIF3CL-201ENST00000380876 FYB1O15117 783 aa16.6■□□□□ 0.25
EIF3CL-201ENST00000380876 GCC1Q96CN9 775 aa16.6■□□□□ 0.25
EIF3CL-201ENST00000380876 C14orf93Q9H972 538 aaKnown RBP16.6■□□□□ 0.25
EIF3CL-201ENST00000380876 C17orf53Q8N3J3 647 aaPredicted RBP16.6■□□□□ 0.25
EIF3CL-201ENST00000380876 VAMP4O75379 141 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms