RNA–Protein interactions for RNA: ENST00000380665.3

CDCA2-202, Transcript of cell division cycle associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCA2, Length 3,565 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-202ENST00000380665 YEATS2Q9ULM3 1422 aa16.27■□□□□ 0.2
CDCA2-202ENST00000380665 A0A0G2JS52 829 aa16.27■□□□□ 0.2
CDCA2-202ENST00000380665 SMARCA5O60264 1052 aaPredicted RBP16.27■□□□□ 0.2
CDCA2-202ENST00000380665 POLKQ9UBT6 870 aa16.27■□□□□ 0.2
CDCA2-202ENST00000380665 PRDM15P57071 1507 aaPredicted RBP16.27■□□□□ 0.19
CDCA2-202ENST00000380665 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.19
CDCA2-202ENST00000380665 PIK3C2GO75747 1445 aa16.26■□□□□ 0.19
CDCA2-202ENST00000380665 F6X3S4 739 aa16.26■□□□□ 0.19
CDCA2-202ENST00000380665 USHBP1Q8N6Y0 703 aa16.26■□□□□ 0.19
CDCA2-202ENST00000380665 TRIM35Q9UPQ4 493 aa16.26■□□□□ 0.19
CDCA2-202ENST00000380665 ZNF518AQ6AHZ1 1483 aa16.26■□□□□ 0.19
CDCA2-202ENST00000380665 NLRP6P59044 892 aa16.26■□□□□ 0.19
CDCA2-202ENST00000380665 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
CDCA2-202ENST00000380665 TRIM6-TRIM34B2RNG4 842 aa16.25■□□□□ 0.19
CDCA2-202ENST00000380665 TSHZ3Q63HK5 1081 aa16.25■□□□□ 0.19
CDCA2-202ENST00000380665 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
CDCA2-202ENST00000380665 EIF2AK4Q9P2K8 1649 aaKnown RBP16.24■□□□□ 0.19
CDCA2-202ENST00000380665 TBC1D2Q9BYX2 928 aa16.24■□□□□ 0.19
CDCA2-202ENST00000380665 FOXO3O43524 673 aa16.24■□□□□ 0.19
CDCA2-202ENST00000380665 HDGFP51858 240 aaKnown RBP16.24■□□□□ 0.19
CDCA2-202ENST00000380665 POLR3AO14802 1390 aaPredicted RBP16.24■□□□□ 0.19
CDCA2-202ENST00000380665 KIF16BQ96L93 1317 aa16.24■□□□□ 0.19
CDCA2-202ENST00000380665 GNAI1P63096 354 aa16.23■□□□□ 0.19
CDCA2-202ENST00000380665 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
CDCA2-202ENST00000380665 CLTCL1P53675 1640 aa16.23■□□□□ 0.19
CDCA2-202ENST00000380665 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
CDCA2-202ENST00000380665 RILPL2Q969X0 211 aa16.23■□□□□ 0.19
CDCA2-202ENST00000380665 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
CDCA2-202ENST00000380665 USP35Q9P2H5 1018 aa16.23■□□□□ 0.19
CDCA2-202ENST00000380665 CCDC9Q9Y3X0 531 aaKnown RBP16.23■□□□□ 0.19
CDCA2-202ENST00000380665 EID1Q9Y6B2 187 aa16.23■□□□□ 0.19
CDCA2-202ENST00000380665 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
CDCA2-202ENST00000380665 ANKRD36BQ8N2N9 1353 aa16.22■□□□□ 0.19
CDCA2-202ENST00000380665 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
CDCA2-202ENST00000380665 OS9Q13438 667 aaPredicted RBP16.22■□□□□ 0.19
CDCA2-202ENST00000380665 NFE2L2Q16236 605 aa16.22■□□□□ 0.19
CDCA2-202ENST00000380665 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
CDCA2-202ENST00000380665 FKBP5Q13451 457 aaPredicted RBP16.22■□□□□ 0.19
CDCA2-202ENST00000380665 C16orf71Q8IYS4 520 aaPredicted RBP16.21■□□□□ 0.19
CDCA2-202ENST00000380665 WASLO00401 505 aaPredicted RBP16.21■□□□□ 0.19
CDCA2-202ENST00000380665 FCHSD2O94868 740 aa16.21■□□□□ 0.18
CDCA2-202ENST00000380665 CALD1Q05682 793 aaKnown RBP16.21■□□□□ 0.18
CDCA2-202ENST00000380665 ZFYVE16Q7Z3T8 1539 aa16.2■□□□□ 0.18
CDCA2-202ENST00000380665 STK31Q9BXU1 1019 aa16.2■□□□□ 0.18
CDCA2-202ENST00000380665 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
CDCA2-202ENST00000380665 CHD1LQ86WJ1 897 aa16.2■□□□□ 0.18
CDCA2-202ENST00000380665 TRMT2AQ8IZ69 625 aaKnown RBP16.2■□□□□ 0.18
CDCA2-202ENST00000380665 MAP4K4O95819 1239 aaPredicted RBP16.17■□□□□ 0.18
CDCA2-202ENST00000380665 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
CDCA2-202ENST00000380665 E9PCH4 1651 aa16.17■□□□□ 0.18
CDCA2-202ENST00000380665 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.17■□□□□ 0.18
CDCA2-202ENST00000380665 IQGAP3Q86VI3 1631 aa16.17■□□□□ 0.18
CDCA2-202ENST00000380665 ABTB2Q8N961 1025 aa16.17■□□□□ 0.18
CDCA2-202ENST00000380665 TRPM2O94759 1503 aa16.16■□□□□ 0.18
CDCA2-202ENST00000380665 DTNBO60941 627 aa16.16■□□□□ 0.18
CDCA2-202ENST00000380665 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
CDCA2-202ENST00000380665 ANXA1P04083 346 aa16.16■□□□□ 0.18
CDCA2-202ENST00000380665 ZNF330Q9Y3S2 320 aaPredicted RBP16.15■□□□□ 0.18
CDCA2-202ENST00000380665 OTUD7AQ8TE49 926 aaPredicted RBP16.14■□□□□ 0.17
CDCA2-202ENST00000380665 CASC1Q6TDU7 716 aa16.14■□□□□ 0.17
CDCA2-202ENST00000380665 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
CDCA2-202ENST00000380665 ACEP12821 1306 aa16.14■□□□□ 0.17
CDCA2-202ENST00000380665 UNC13BO14795 1591 aa16.14■□□□□ 0.17
CDCA2-202ENST00000380665 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
CDCA2-202ENST00000380665 IL1RAPL2Q9NP60 686 aa16.13■□□□□ 0.17
CDCA2-202ENST00000380665 INSRP06213 1382 aa16.13■□□□□ 0.17
CDCA2-202ENST00000380665 GOLGA6L3A6NEY3 463 aa16.13■□□□□ 0.17
CDCA2-202ENST00000380665 POGZQ7Z3K3 1410 aa16.12■□□□□ 0.17
CDCA2-202ENST00000380665 YTHDC2Q9H6S0 1430 aaKnown RBP16.12■□□□□ 0.17
CDCA2-202ENST00000380665 VAMP4O75379 141 aa16.12■□□□□ 0.17
CDCA2-202ENST00000380665 PLCB2Q00722 1185 aa16.12■□□□□ 0.17
CDCA2-202ENST00000380665 TBC1D32Q96NH3 1257 aa16.12■□□□□ 0.17
CDCA2-202ENST00000380665 NAP1L5Q96NT1 182 aaPredicted RBP16.12■□□□□ 0.17
CDCA2-202ENST00000380665 TRIM44Q96DX7 344 aaPredicted RBP16.12■□□□□ 0.17
CDCA2-202ENST00000380665 AIMP1Q12904 312 aaKnown RBP16.11■□□□□ 0.17
CDCA2-202ENST00000380665 MEIS3Q99687 375 aa16.11■□□□□ 0.17
CDCA2-202ENST00000380665 AMOTL2Q9Y2J4 779 aa16.11■□□□□ 0.17
CDCA2-202ENST00000380665 MADDQ8WXG6 1647 aa16.11■□□□□ 0.17
CDCA2-202ENST00000380665 EIF4A2Q14240 407 aaKnown RBP16.11■□□□□ 0.17
CDCA2-202ENST00000380665 GOLGA6L22H0YM25 854 aa16.1■□□□□ 0.17
CDCA2-202ENST00000380665 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
CDCA2-202ENST00000380665 NPC1L1Q9UHC9 1359 aa16.1■□□□□ 0.17
CDCA2-202ENST00000380665 LARP6Q9BRS8 491 aaKnown RBP16.1■□□□□ 0.17
CDCA2-202ENST00000380665 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
CDCA2-202ENST00000380665 PLEKHF1Q96S99 279 aa16.1■□□□□ 0.17
CDCA2-202ENST00000380665 ANO2Q9NQ90 1003 aa16.1■□□□□ 0.17
CDCA2-202ENST00000380665 ZBTB40Q9NUA8 1239 aa16.1■□□□□ 0.17
CDCA2-202ENST00000380665 PLXNC1O60486 1568 aa16.09■□□□□ 0.17
CDCA2-202ENST00000380665 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
CDCA2-202ENST00000380665 ESCO1Q5FWF5 840 aa16.09■□□□□ 0.17
CDCA2-202ENST00000380665 TRAK2O60296 914 aa16.09■□□□□ 0.17
CDCA2-202ENST00000380665 PSME1Q06323 249 aa16.08■□□□□ 0.17
CDCA2-202ENST00000380665 ANP32BQ92688 251 aaKnown RBP16.08■□□□□ 0.17
CDCA2-202ENST00000380665 KDM5AP29375 1690 aaKnown RBP16.08■□□□□ 0.17
CDCA2-202ENST00000380665 DDX54Q8TDD1 881 aaKnown RBP16.08■□□□□ 0.16
CDCA2-202ENST00000380665 CSB-PGBD3P0DP91 1061 aa16.08■□□□□ 0.16
CDCA2-202ENST00000380665 G2E3Q7L622 706 aa16.08■□□□□ 0.16
CDCA2-202ENST00000380665 TBC1D9Q6ZT07 1266 aa16.07■□□□□ 0.16
CDCA2-202ENST00000380665 KCNJ4P48050 445 aa16.07■□□□□ 0.16
CDCA2-202ENST00000380665 MRPL50Q8N5N7 158 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms