RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 PNPLA6Q8IY17 1366 aa16.37■□□□□ 0.21
VPS16-202ENST00000380445 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
VPS16-202ENST00000380445 MS4A1P11836 297 aa16.37■□□□□ 0.21
VPS16-202ENST00000380445 PPIP5K1Q6PFW1 1433 aa16.37■□□□□ 0.21
VPS16-202ENST00000380445 CPSF1Q10570 1443 aaKnown RBP16.36■□□□□ 0.21
VPS16-202ENST00000380445 PDE3AQ14432 1141 aa16.36■□□□□ 0.21
VPS16-202ENST00000380445 MAPK8IP3Q9UPT6 1336 aa16.36■□□□□ 0.21
VPS16-202ENST00000380445 CCDC61Q9Y6R9 512 aa16.36■□□□□ 0.21
VPS16-202ENST00000380445 PLEKHG1Q9ULL1 1385 aa16.36■□□□□ 0.21
VPS16-202ENST00000380445 BCAR3O75815 825 aa16.35■□□□□ 0.21
VPS16-202ENST00000380445 CENPQQ7L2Z9 268 aaPredicted RBP16.35■□□□□ 0.21
VPS16-202ENST00000380445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
VPS16-202ENST00000380445 NUDT16Q96DE0 195 aaKnown RBP16.35■□□□□ 0.21
VPS16-202ENST00000380445 EID1Q9Y6B2 187 aa16.35■□□□□ 0.21
VPS16-202ENST00000380445 DEKP35659 375 aaKnown RBP16.34■□□□□ 0.21
VPS16-202ENST00000380445 PLEKHF1Q96S99 279 aa16.34■□□□□ 0.21
VPS16-202ENST00000380445 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.21
VPS16-202ENST00000380445 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.2
VPS16-202ENST00000380445 ADAMTS13Q76LX8 1427 aa16.33■□□□□ 0.2
VPS16-202ENST00000380445 CT47B1P0C2W7 299 aaPredicted RBP16.32■□□□□ 0.2
VPS16-202ENST00000380445 CDC42BPGQ6DT37 1551 aa16.32■□□□□ 0.2
VPS16-202ENST00000380445 TMPOP42166 694 aaKnown RBP16.32■□□□□ 0.2
VPS16-202ENST00000380445 KDM2BQ8NHM5 1336 aa16.31■□□□□ 0.2
VPS16-202ENST00000380445 FCHSD2O94868 740 aa16.31■□□□□ 0.2
VPS16-202ENST00000380445 NEFMP07197 916 aa16.31■□□□□ 0.2
VPS16-202ENST00000380445 RARSP54136 660 aaKnown RBP16.31■□□□□ 0.2
VPS16-202ENST00000380445 POLKQ9UBT6 870 aa16.31■□□□□ 0.2
VPS16-202ENST00000380445 AAMPQ13685 434 aa16.3■□□□□ 0.2
VPS16-202ENST00000380445 LTKP29376 864 aa16.3■□□□□ 0.2
VPS16-202ENST00000380445 IL16Q14005 1332 aa16.29■□□□□ 0.2
VPS16-202ENST00000380445 AATKQ6ZMQ8 1374 aa16.29■□□□□ 0.2
VPS16-202ENST00000380445 ANP32AP39687 249 aaKnown RBP16.29■□□□□ 0.2
VPS16-202ENST00000380445 CEBPAP49715 358 aaPredicted RBP16.29■□□□□ 0.2
VPS16-202ENST00000380445 COG3Q96JB2 828 aa16.29■□□□□ 0.2
VPS16-202ENST00000380445 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
VPS16-202ENST00000380445 C3P01024 1663 aa16.29■□□□□ 0.2
VPS16-202ENST00000380445 SLIT1O75093 1534 aa16.28■□□□□ 0.2
VPS16-202ENST00000380445 MON2Q7Z3U7 1717 aa16.28■□□□□ 0.2
VPS16-202ENST00000380445 THEMISQ8N1K5 641 aaPredicted RBP16.27■□□□□ 0.2
VPS16-202ENST00000380445 PPM1GO15355 546 aaPredicted RBP16.27■□□□□ 0.2
VPS16-202ENST00000380445 ARHGAP23Q9P227 1491 aa16.27■□□□□ 0.19
VPS16-202ENST00000380445 ITSN1Q15811 1721 aa16.27■□□□□ 0.19
VPS16-202ENST00000380445 RIPK4P57078 832 aa16.26■□□□□ 0.19
VPS16-202ENST00000380445 FER1L4A9Z1Z3 1794 aa16.26■□□□□ 0.19
VPS16-202ENST00000380445 AKAP12Q02952 1782 aa16.26■□□□□ 0.19
VPS16-202ENST00000380445 MAP2P11137 1827 aaKnown RBP16.26■□□□□ 0.19
VPS16-202ENST00000380445 PDE4AP27815 886 aa16.26■□□□□ 0.19
VPS16-202ENST00000380445 NME9Q86XW9 330 aa16.26■□□□□ 0.19
VPS16-202ENST00000380445 TRIM35Q9UPQ4 493 aa16.26■□□□□ 0.19
VPS16-202ENST00000380445 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
VPS16-202ENST00000380445 TBX22Q9Y458 520 aa16.26■□□□□ 0.19
VPS16-202ENST00000380445 CDK12Q9NYV4 1490 aaPredicted RBP16.25■□□□□ 0.19
VPS16-202ENST00000380445 BACH2Q9BYV9 841 aa16.25■□□□□ 0.19
VPS16-202ENST00000380445 PRR36Q9H6K5 1346 aa16.24■□□□□ 0.19
VPS16-202ENST00000380445 CLUAP1Q96AJ1 413 aa16.23■□□□□ 0.19
VPS16-202ENST00000380445 RSPH6AQ9H0K4 717 aa16.23■□□□□ 0.19
VPS16-202ENST00000380445 PLEKHG3A1L390 1219 aa16.23■□□□□ 0.19
VPS16-202ENST00000380445 SLC26A8Q96RN1 970 aa16.23■□□□□ 0.19
VPS16-202ENST00000380445 DIP2AQ14689 1571 aa16.22■□□□□ 0.19
VPS16-202ENST00000380445 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.22■□□□□ 0.19
VPS16-202ENST00000380445 NCKAP5LQ9HCH0 1330 aa16.22■□□□□ 0.19
VPS16-202ENST00000380445 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
VPS16-202ENST00000380445 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
VPS16-202ENST00000380445 UBE2Q2Q8WVN8 375 aa16.22■□□□□ 0.19
VPS16-202ENST00000380445 COG6Q9Y2V7 657 aa16.22■□□□□ 0.19
VPS16-202ENST00000380445 LRRC7Q96NW7 1537 aa16.22■□□□□ 0.19
VPS16-202ENST00000380445 CALD1Q05682 793 aaKnown RBP16.21■□□□□ 0.19
VPS16-202ENST00000380445 AMOTL2Q9Y2J4 779 aa16.21■□□□□ 0.19
VPS16-202ENST00000380445 EMILIN1Q9Y6C2 1016 aa16.21■□□□□ 0.19
VPS16-202ENST00000380445 IL13P35225 146 aa16.21■□□□□ 0.19
VPS16-202ENST00000380445 PTCH1Q13635 1447 aa16.21■□□□□ 0.19
VPS16-202ENST00000380445 PTPRUQ92729 1446 aa16.21■□□□□ 0.18
VPS16-202ENST00000380445 FBLN1P23142 703 aa16.21■□□□□ 0.18
VPS16-202ENST00000380445 IPO9Q96P70 1041 aaKnown RBP16.21■□□□□ 0.18
VPS16-202ENST00000380445 TOPAZ1Q8N9V7 1692 aa16.2■□□□□ 0.18
VPS16-202ENST00000380445 EXOSC9Q06265 439 aaKnown RBP16.2■□□□□ 0.18
VPS16-202ENST00000380445 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
VPS16-202ENST00000380445 TSR2Q969E8 191 aaKnown RBP16.2■□□□□ 0.18
VPS16-202ENST00000380445 ACEP12821 1306 aa16.19■□□□□ 0.18
VPS16-202ENST00000380445 NOP58Q9Y2X3 529 aaKnown RBP16.19■□□□□ 0.18
VPS16-202ENST00000380445 TTC21BQ7Z4L5 1316 aa16.19■□□□□ 0.18
VPS16-202ENST00000380445 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
VPS16-202ENST00000380445 PMFBP1Q8TBY8 1022 aa16.19■□□□□ 0.18
VPS16-202ENST00000380445 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
VPS16-202ENST00000380445 PLPPR3Q6T4P5 718 aa16.18■□□□□ 0.18
VPS16-202ENST00000380445 BCL2L13Q9BXK5 485 aa16.18■□□□□ 0.18
VPS16-202ENST00000380445 ZNF428Q96B54 188 aa16.17■□□□□ 0.18
VPS16-202ENST00000380445 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
VPS16-202ENST00000380445 HMOX1P09601 288 aa16.17■□□□□ 0.18
VPS16-202ENST00000380445 USP6P35125 1406 aa16.17■□□□□ 0.18
VPS16-202ENST00000380445 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
VPS16-202ENST00000380445 NRKQ7Z2Y5 1582 aa16.16■□□□□ 0.18
VPS16-202ENST00000380445 FTSJ3Q8IY81 847 aaKnown RBP16.16■□□□□ 0.18
VPS16-202ENST00000380445 RRS1Q15050 365 aaKnown RBP16.16■□□□□ 0.18
VPS16-202ENST00000380445 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
VPS16-202ENST00000380445 PIK3R4Q99570 1358 aa16.15■□□□□ 0.18
VPS16-202ENST00000380445 TTC21AQ8NDW8 1320 aa16.15■□□□□ 0.18
VPS16-202ENST00000380445 MVPQ14764 893 aaKnown RBP16.15■□□□□ 0.18
VPS16-202ENST00000380445 ZBTB47Q9UFB7 747 aaPredicted RBP16.15■□□□□ 0.18
VPS16-202ENST00000380445 IGHDP01880 384 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms