RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 NPC1L1Q9UHC9 1359 aa20.58■□□□□ 0.88
RPP40-202ENST00000380051 PSME1Q06323 249 aa20.57■□□□□ 0.88
RPP40-202ENST00000380051 AMER1Q5JTC6 1135 aaPredicted RBP20.57■□□□□ 0.88
RPP40-202ENST00000380051 BRINP3Q76B58 766 aa20.57■□□□□ 0.88
RPP40-202ENST00000380051 FOXO3O43524 673 aa20.56■□□□□ 0.88
RPP40-202ENST00000380051 ANP32CO43423 234 aa20.56■□□□□ 0.88
RPP40-202ENST00000380051 SSH2Q76I76 1423 aa20.55■□□□□ 0.88
RPP40-202ENST00000380051 NPHP3Q7Z494 1330 aa20.55■□□□□ 0.88
RPP40-202ENST00000380051 TTC21BQ7Z4L5 1316 aa20.55■□□□□ 0.88
RPP40-202ENST00000380051 TTC21AQ8NDW8 1320 aa20.54■□□□□ 0.88
RPP40-202ENST00000380051 KRT28Q7Z3Y7 464 aa20.53■□□□□ 0.88
RPP40-202ENST00000380051 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.53■□□□□ 0.88
RPP40-202ENST00000380051 NSD2O96028 1365 aa20.53■□□□□ 0.88
RPP40-202ENST00000380051 FYB1O15117 783 aa20.52■□□□□ 0.88
RPP40-202ENST00000380051 UBAP1LF5GYI3 381 aa20.51■□□□□ 0.87
RPP40-202ENST00000380051 CC2D1BQ5T0F9 858 aaKnown RBP20.51■□□□□ 0.87
RPP40-202ENST00000380051 RALBP1Q15311 655 aa20.5■□□□□ 0.87
RPP40-202ENST00000380051 PRKRIP1Q9H875 184 aaPredicted RBP20.5■□□□□ 0.87
RPP40-202ENST00000380051 NRKQ7Z2Y5 1582 aa20.5■□□□□ 0.87
RPP40-202ENST00000380051 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
RPP40-202ENST00000380051 KIF20BQ96Q89 1820 aa20.47■□□□□ 0.87
RPP40-202ENST00000380051 SBNO1A3KN83 1393 aa20.47■□□□□ 0.87
RPP40-202ENST00000380051 SOS2Q07890 1332 aaPredicted RBP20.47■□□□□ 0.87
RPP40-202ENST00000380051 ROBO1Q9Y6N7 1651 aa20.47■□□□□ 0.87
RPP40-202ENST00000380051 CNGB1Q14028 1251 aaPredicted RBP20.47■□□□□ 0.87
RPP40-202ENST00000380051 NME9Q86XW9 330 aa20.47■□□□□ 0.87
RPP40-202ENST00000380051 DDX17Q92841 729 aaKnown RBP20.47■□□□□ 0.87
RPP40-202ENST00000380051 GGNBP2Q9H3C7 697 aa20.47■□□□□ 0.87
RPP40-202ENST00000380051 PARD3Q8TEW0 1356 aa20.46■□□□□ 0.87
RPP40-202ENST00000380051 XPCQ01831 940 aaPredicted RBP20.46■□□□□ 0.87
RPP40-202ENST00000380051 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
RPP40-202ENST00000380051 ABTB2Q8N961 1025 aa20.45■□□□□ 0.86
RPP40-202ENST00000380051 PXDNQ92626 1479 aa20.45■□□□□ 0.86
RPP40-202ENST00000380051 NHSL1Q5SYE7 1610 aa20.45■□□□□ 0.86
RPP40-202ENST00000380051 USP31Q70CQ4 1352 aa20.45■□□□□ 0.86
RPP40-202ENST00000380051 TRPM3Q9HCF6 1732 aaPredicted RBP20.45■□□□□ 0.86
RPP40-202ENST00000380051 COG3Q96JB2 828 aa20.44■□□□□ 0.86
RPP40-202ENST00000380051 RNF39Q9H2S5 420 aa20.44■□□□□ 0.86
RPP40-202ENST00000380051 PIP4K2BP78356 416 aa20.43■□□□□ 0.86
RPP40-202ENST00000380051 MIER1Q8N108 512 aa20.43■□□□□ 0.86
RPP40-202ENST00000380051 ANKRD26Q9UPS8 1709 aa20.43■□□□□ 0.86
RPP40-202ENST00000380051 NLRP6P59044 892 aa20.42■□□□□ 0.86
RPP40-202ENST00000380051 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
RPP40-202ENST00000380051 NLRP13Q86W25 1043 aa20.42■□□□□ 0.86
RPP40-202ENST00000380051 AHDC1Q5TGY3 1603 aaPredicted RBP20.41■□□□□ 0.86
RPP40-202ENST00000380051 SPATA31A3Q5VYP0 1347 aa20.41■□□□□ 0.86
RPP40-202ENST00000380051 ZRANB1Q9UGI0 708 aa20.41■□□□□ 0.86
RPP40-202ENST00000380051 PIK3C2AO00443 1686 aa20.4■□□□□ 0.86
RPP40-202ENST00000380051 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
RPP40-202ENST00000380051 OVOS2A0A0J9YW53 1432 aa20.4■□□□□ 0.86
RPP40-202ENST00000380051 TNS3Q68CZ2 1445 aa20.4■□□□□ 0.86
RPP40-202ENST00000380051 OVOS2Q6IE36 1432 aa20.4■□□□□ 0.86
RPP40-202ENST00000380051 USP54Q70EL1 1684 aa20.38■□□□□ 0.85
RPP40-202ENST00000380051 ALS2Q96Q42 1657 aa20.38■□□□□ 0.85
RPP40-202ENST00000380051 ARHGEF10O15013 1369 aa20.38■□□□□ 0.85
RPP40-202ENST00000380051 LMOD2Q6P5Q4 547 aa20.38■□□□□ 0.85
RPP40-202ENST00000380051 LRRC59Q96AG4 307 aaKnown RBP20.38■□□□□ 0.85
RPP40-202ENST00000380051 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
RPP40-202ENST00000380051 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
RPP40-202ENST00000380051 NUTM2GQ5VZR2 741 aa20.37■□□□□ 0.85
RPP40-202ENST00000380051 AATKQ6ZMQ8 1374 aa20.35■□□□□ 0.85
RPP40-202ENST00000380051 TNNT2P45379 298 aaPredicted RBP20.35■□□□□ 0.85
RPP40-202ENST00000380051 KCNH5Q8NCM2 988 aa20.34■□□□□ 0.85
RPP40-202ENST00000380051 PHLPP1O60346 1717 aa20.34■□□□□ 0.85
RPP40-202ENST00000380051 USP19O94966 1318 aa20.33■□□□□ 0.84
RPP40-202ENST00000380051 MARF1Q9Y4F3 1742 aaKnown RBP20.32■□□□□ 0.84
RPP40-202ENST00000380051 COL16A1Q07092 1604 aaPredicted RBP20.3■□□□□ 0.84
RPP40-202ENST00000380051 MAP2P11137 1827 aaKnown RBP20.3■□□□□ 0.84
RPP40-202ENST00000380051 GCP02774 474 aa20.3■□□□□ 0.84
RPP40-202ENST00000380051 POLKQ9UBT6 870 aa20.3■□□□□ 0.84
RPP40-202ENST00000380051 SLIT3O75094 1523 aa20.29■□□□□ 0.84
RPP40-202ENST00000380051 MTHFSP49914 203 aa20.29■□□□□ 0.84
RPP40-202ENST00000380051 FBLN1P23142 703 aa20.28■□□□□ 0.84
RPP40-202ENST00000380051 MED1Q15648 1581 aaPredicted RBP20.28■□□□□ 0.84
RPP40-202ENST00000380051 SOX12O15370 315 aa20.26■□□□□ 0.83
RPP40-202ENST00000380051 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
RPP40-202ENST00000380051 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
RPP40-202ENST00000380051 MRS2Q9HD23 443 aa20.25■□□□□ 0.83
RPP40-202ENST00000380051 SMG6Q86US8 1419 aaKnown RBP20.25■□□□□ 0.83
RPP40-202ENST00000380051 KIF24Q5T7B8 1368 aa20.25■□□□□ 0.83
RPP40-202ENST00000380051 PNPLA6Q8IY17 1366 aa20.25■□□□□ 0.83
RPP40-202ENST00000380051 CABLES1Q8TDN4 633 aa20.24■□□□□ 0.83
RPP40-202ENST00000380051 NFAT5O94916 1531 aa20.24■□□□□ 0.83
RPP40-202ENST00000380051 MAP3K19Q56UN5 1328 aa20.24■□□□□ 0.83
RPP40-202ENST00000380051 PLEKHG5O94827 1062 aa20.24■□□□□ 0.83
RPP40-202ENST00000380051 CCDC184Q52MB2 194 aa20.24■□□□□ 0.83
RPP40-202ENST00000380051 EMILIN1Q9Y6C2 1016 aa20.24■□□□□ 0.83
RPP40-202ENST00000380051 CRYBG1Q9Y4K1 1723 aa20.23■□□□□ 0.83
RPP40-202ENST00000380051 COL22A1Q8NFW1 1626 aaPredicted RBP20.23■□□□□ 0.83
RPP40-202ENST00000380051 PHRF1Q9P1Y6 1649 aaKnown RBP20.23■□□□□ 0.83
RPP40-202ENST00000380051 INSRP06213 1382 aa20.23■□□□□ 0.83
RPP40-202ENST00000380051 C1QBPQ07021 282 aaKnown RBP20.23■□□□□ 0.83
RPP40-202ENST00000380051 ARHGEF25Q86VW2 580 aa20.23■□□□□ 0.83
RPP40-202ENST00000380051 PPM1GO15355 546 aaPredicted RBP20.22■□□□□ 0.83
RPP40-202ENST00000380051 AMPHP49418 695 aa20.22■□□□□ 0.83
RPP40-202ENST00000380051 HAP1P54257 671 aaPredicted RBP20.22■□□□□ 0.83
RPP40-202ENST00000380051 JCADQ9P266 1359 aa20.21■□□□□ 0.83
RPP40-202ENST00000380051 HSPA1LP34931 641 aa20.21■□□□□ 0.83
RPP40-202ENST00000380051 CDK12Q9NYV4 1490 aaPredicted RBP20.2■□□□□ 0.82
RPP40-202ENST00000380051 ZC3H6P61129 1189 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms