RNA–Protein interactions for RNA: ENST00000378896.7

MCM8-204, Transcript of minichromosome maintenance 8 homologous recombination repair factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MCM8, Length 3,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM8-204ENST00000378896 NSD3Q9BZ95 1437 aa11.31□□□□□ -0.6
MCM8-204ENST00000378896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.31□□□□□ -0.6
MCM8-204ENST00000378896 PDIA4P13667 645 aaKnown RBP11.31□□□□□ -0.6
MCM8-204ENST00000378896 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
MCM8-204ENST00000378896 SLC12A5Q9H2X9 1139 aa11.31□□□□□ -0.6
MCM8-204ENST00000378896 TMEM51Q9NW97 253 aa11.31□□□□□ -0.6
MCM8-204ENST00000378896 ZKSCAN5Q9Y2L8 839 aa11.31□□□□□ -0.6
MCM8-204ENST00000378896 TTC37Q6PGP7 1564 aa11.31□□□□□ -0.6
MCM8-204ENST00000378896 PDLIM2Q96JY6 352 aa11.3□□□□□ -0.6
MCM8-204ENST00000378896 IQGAP1P46940 1657 aa11.3□□□□□ -0.6
MCM8-204ENST00000378896 VGLL3A8MV65 326 aa11.3□□□□□ -0.6
MCM8-204ENST00000378896 U2SURPO15042 1029 aaKnown RBP11.3□□□□□ -0.6
MCM8-204ENST00000378896 IGSF3O75054 1194 aa11.3□□□□□ -0.6
MCM8-204ENST00000378896 ATP2B3Q16720 1220 aa11.3□□□□□ -0.6
MCM8-204ENST00000378896 SASS6Q6UVJ0 657 aa11.3□□□□□ -0.6
MCM8-204ENST00000378896 PLCH2O75038 1416 aa11.3□□□□□ -0.6
MCM8-204ENST00000378896 ADGRF5Q8IZF2 1346 aa11.3□□□□□ -0.6
MCM8-204ENST00000378896 IPO8O15397 1037 aaKnown RBP11.29□□□□□ -0.6
MCM8-204ENST00000378896 CT47B1P0C2W7 299 aaPredicted RBP11.29□□□□□ -0.6
MCM8-204ENST00000378896 NCLP19338 710 aaKnown RBP11.29□□□□□ -0.6
MCM8-204ENST00000378896 CCDC27Q2M243 656 aa11.29□□□□□ -0.6
MCM8-204ENST00000378896 KLHL40Q2TBA0 621 aa11.29□□□□□ -0.6
MCM8-204ENST00000378896 CAVIN1Q6NZI2 390 aaKnown RBP11.29□□□□□ -0.6
MCM8-204ENST00000378896 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
MCM8-204ENST00000378896 ZBTB22O15209 634 aa11.29□□□□□ -0.6
MCM8-204ENST00000378896 PRIM1P49642 420 aaKnown RBP11.29□□□□□ -0.6
MCM8-204ENST00000378896 HS1BP3Q53T59 392 aa11.29□□□□□ -0.6
MCM8-204ENST00000378896 KIF2CQ99661 725 aa11.29□□□□□ -0.6
MCM8-204ENST00000378896 TRPM2O94759 1503 aa11.29□□□□□ -0.6
MCM8-204ENST00000378896 PTMSP20962 102 aa11.28□□□□□ -0.6
MCM8-204ENST00000378896 SNX21Q969T3 373 aa11.28□□□□□ -0.6
MCM8-204ENST00000378896 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
MCM8-204ENST00000378896 TRAPPC8Q9Y2L5 1435 aa11.28□□□□□ -0.6
MCM8-204ENST00000378896 ERVK-7P63135 1459 aa11.28□□□□□ -0.6
MCM8-204ENST00000378896 GOLGA6L22H0YM25 854 aa11.28□□□□□ -0.6
MCM8-204ENST00000378896 BAG4O95429 457 aaKnown RBP11.28□□□□□ -0.6
MCM8-204ENST00000378896 ZSCAN23Q3MJ62 389 aa11.28□□□□□ -0.6
MCM8-204ENST00000378896 GAS2L2Q8NHY3 880 aa11.27□□□□□ -0.6
MCM8-204ENST00000378896 RBM25P49756 843 aaKnown RBP11.27□□□□□ -0.61
MCM8-204ENST00000378896 ZNF445P59923 1031 aa11.27□□□□□ -0.61
MCM8-204ENST00000378896 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
MCM8-204ENST00000378896 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
MCM8-204ENST00000378896 PTPRTO14522 1441 aa11.27□□□□□ -0.61
MCM8-204ENST00000378896 MPNDQ8N594 471 aa11.26□□□□□ -0.61
MCM8-204ENST00000378896 TSR2Q969E8 191 aaKnown RBP11.26□□□□□ -0.61
MCM8-204ENST00000378896 IBTKQ9P2D0 1353 aaPredicted RBP11.26□□□□□ -0.61
MCM8-204ENST00000378896 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
MCM8-204ENST00000378896 HDAC1Q13547 482 aaPredicted RBP11.26□□□□□ -0.61
MCM8-204ENST00000378896 CSPP1Q1MSJ5 1256 aa11.26□□□□□ -0.61
MCM8-204ENST00000378896 MCTP1Q6DN14 999 aa11.26□□□□□ -0.61
MCM8-204ENST00000378896 ATF7IPQ6VMQ6 1270 aa11.25□□□□□ -0.61
MCM8-204ENST00000378896 CHAMP1Q96JM3 812 aa11.25□□□□□ -0.61
MCM8-204ENST00000378896 ZNF830Q96NB3 372 aaPredicted RBP11.25□□□□□ -0.61
MCM8-204ENST00000378896 AK9Q5TCS8 1911 aa11.25□□□□□ -0.61
MCM8-204ENST00000378896 PLPPR3Q6T4P5 718 aa11.25□□□□□ -0.61
MCM8-204ENST00000378896 SPHKAPQ2M3C7 1700 aa11.25□□□□□ -0.61
MCM8-204ENST00000378896 PLCD3Q8N3E9 789 aa11.24□□□□□ -0.61
MCM8-204ENST00000378896 GTPBP4Q9BZE4 634 aaKnown RBP11.24□□□□□ -0.61
MCM8-204ENST00000378896 KIF20AO95235 890 aa11.24□□□□□ -0.61
MCM8-204ENST00000378896 TRIM27P14373 513 aa11.24□□□□□ -0.61
MCM8-204ENST00000378896 PKP1Q13835 747 aa11.24□□□□□ -0.61
MCM8-204ENST00000378896 MYRIPQ8NFW9 859 aa11.24□□□□□ -0.61
MCM8-204ENST00000378896 LNPKQ9C0E8 428 aa11.24□□□□□ -0.61
MCM8-204ENST00000378896 EVC2Q86UK5 1308 aa11.24□□□□□ -0.61
MCM8-204ENST00000378896 SBNO2Q9Y2G9 1366 aa11.24□□□□□ -0.61
MCM8-204ENST00000378896 KIF16BQ96L93 1317 aa11.24□□□□□ -0.61
MCM8-204ENST00000378896 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
MCM8-204ENST00000378896 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
MCM8-204ENST00000378896 NOB1Q9ULX3 412 aaKnown RBP11.23□□□□□ -0.61
MCM8-204ENST00000378896 CLTCL1P53675 1640 aa11.23□□□□□ -0.61
MCM8-204ENST00000378896 LMBRD1Q9NUN5 540 aa11.23□□□□□ -0.61
MCM8-204ENST00000378896 RNF214Q8ND24 703 aa11.23□□□□□ -0.61
MCM8-204ENST00000378896 K7ELQ4 463 aaPredicted RBP11.22□□□□□ -0.61
MCM8-204ENST00000378896 TMEM132EQ6IEE7 984 aa11.22□□□□□ -0.61
MCM8-204ENST00000378896 MYOM1P52179 1685 aa11.22□□□□□ -0.61
MCM8-204ENST00000378896 C17orf53Q8N3J3 647 aaPredicted RBP11.22□□□□□ -0.61
MCM8-204ENST00000378896 GPT2Q8TD30 523 aa11.22□□□□□ -0.61
MCM8-204ENST00000378896 LETM1O95202 739 aaPredicted RBP11.22□□□□□ -0.61
MCM8-204ENST00000378896 CLEC17AQ6ZS10 378 aa11.22□□□□□ -0.61
MCM8-204ENST00000378896 TMEM57Q8N5G2 664 aa11.22□□□□□ -0.61
MCM8-204ENST00000378896 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.61
MCM8-204ENST00000378896 DNTTIP2Q5QJE6 756 aaKnown RBP11.21□□□□□ -0.61
MCM8-204ENST00000378896 NSFL1CQ9UNZ2 370 aaKnown RBP11.21□□□□□ -0.61
MCM8-204ENST00000378896 ANKRD45Q5TZF3 282 aa11.21□□□□□ -0.61
MCM8-204ENST00000378896 CEP152O94986 1710 aa11.21□□□□□ -0.62
MCM8-204ENST00000378896 MYOM2P54296 1465 aa11.21□□□□□ -0.62
MCM8-204ENST00000378896 ABCC1P33527 1531 aa11.21□□□□□ -0.62
MCM8-204ENST00000378896 MAPK8IP2Q13387 824 aaPredicted RBP11.21□□□□□ -0.62
MCM8-204ENST00000378896 CGNQ9P2M7 1197 aaKnown RBP11.21□□□□□ -0.62
MCM8-204ENST00000378896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.21□□□□□ -0.62
MCM8-204ENST00000378896 MCM5P33992 734 aa11.2□□□□□ -0.62
MCM8-204ENST00000378896 IPO4Q8TEX9 1081 aaKnown RBP11.2□□□□□ -0.62
MCM8-204ENST00000378896 SYCE3A1L190 88 aa11.2□□□□□ -0.62
MCM8-204ENST00000378896 PRPF40AO75400 957 aaKnown RBP11.2□□□□□ -0.62
MCM8-204ENST00000378896 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
MCM8-204ENST00000378896 SAFB2Q14151 953 aaKnown RBP eCLIP11.2□□□□□ -0.62
MCM8-204ENST00000378896 CHD1LQ86WJ1 897 aa11.2□□□□□ -0.62
MCM8-204ENST00000378896 CCDC39Q9UFE4 941 aa11.2□□□□□ -0.62
MCM8-204ENST00000378896 NOS1P29475 1434 aa11.2□□□□□ -0.62
MCM8-204ENST00000378896 NSD2O96028 1365 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms