RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 MFAP1P55081 439 aaKnown RBP19.62■□□□□ 0.73
RER1-203ENST00000378513 RWDD1Q9H446 243 aaPredicted RBP19.62■□□□□ 0.73
RER1-203ENST00000378513 SETBP1Q9Y6X0 1596 aa19.62■□□□□ 0.73
RER1-203ENST00000378513 HECW2Q9P2P5 1572 aa19.61■□□□□ 0.73
RER1-203ENST00000378513 TMEM57Q8N5G2 664 aa19.61■□□□□ 0.73
RER1-203ENST00000378513 CAMSAP1Q5T5Y3 1602 aa19.6■□□□□ 0.73
RER1-203ENST00000378513 C1orf115Q9H7X2 142 aa19.6■□□□□ 0.73
RER1-203ENST00000378513 TERF2IPQ9NYB0 399 aa19.6■□□□□ 0.73
RER1-203ENST00000378513 DIAPH1O60610 1272 aaKnown RBP19.6■□□□□ 0.73
RER1-203ENST00000378513 PRKAR2BP31323 418 aa19.59■□□□□ 0.73
RER1-203ENST00000378513 NEURL4Q96JN8 1562 aa19.59■□□□□ 0.73
RER1-203ENST00000378513 CCDC27Q2M243 656 aa19.58■□□□□ 0.73
RER1-203ENST00000378513 PHACTR3Q96KR7 559 aa19.58■□□□□ 0.73
RER1-203ENST00000378513 NEXMIFQ5QGS0 1516 aa19.58■□□□□ 0.72
RER1-203ENST00000378513 NUTM2FA1L443 756 aa19.58■□□□□ 0.72
RER1-203ENST00000378513 EMILIN1Q9Y6C2 1016 aa19.57■□□□□ 0.72
RER1-203ENST00000378513 ZC3H13Q5T200 1668 aaKnown RBP19.56■□□□□ 0.72
RER1-203ENST00000378513 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
RER1-203ENST00000378513 ABCC11Q96J66 1382 aa19.56■□□□□ 0.72
RER1-203ENST00000378513 ATF7IPQ6VMQ6 1270 aa19.55■□□□□ 0.72
RER1-203ENST00000378513 LNPKQ9C0E8 428 aa19.55■□□□□ 0.72
RER1-203ENST00000378513 SLC52A1Q9NWF4 448 aa19.55■□□□□ 0.72
RER1-203ENST00000378513 UPF2Q9HAU5 1272 aaKnown RBP19.55■□□□□ 0.72
RER1-203ENST00000378513 ARHGEF28Q8N1W1 1705 aaKnown RBP19.55■□□□□ 0.72
RER1-203ENST00000378513 NINLQ9Y2I6 1382 aa19.54■□□□□ 0.72
RER1-203ENST00000378513 SOX12O15370 315 aa19.54■□□□□ 0.72
RER1-203ENST00000378513 TBC1D2Q9BYX2 928 aa19.54■□□□□ 0.72
RER1-203ENST00000378513 NME9Q86XW9 330 aa19.54■□□□□ 0.72
RER1-203ENST00000378513 TSPYL6Q8N831 410 aa19.54■□□□□ 0.72
RER1-203ENST00000378513 RRS1Q15050 365 aaKnown RBP19.53■□□□□ 0.72
RER1-203ENST00000378513 YTHDC2Q9H6S0 1430 aaKnown RBP19.52■□□□□ 0.72
RER1-203ENST00000378513 FAM69CQ0P6D2 419 aa19.52■□□□□ 0.72
RER1-203ENST00000378513 DCTN1Q14203 1278 aa19.52■□□□□ 0.72
RER1-203ENST00000378513 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
RER1-203ENST00000378513 MYO5BQ9ULV0 1848 aa19.52■□□□□ 0.72
RER1-203ENST00000378513 TXNDC2Q86VQ3 553 aa19.52■□□□□ 0.72
RER1-203ENST00000378513 BECN1Q14457 450 aa19.51■□□□□ 0.71
RER1-203ENST00000378513 POLKQ9UBT6 870 aa19.51■□□□□ 0.71
RER1-203ENST00000378513 PIK3C2BO00750 1634 aa19.51■□□□□ 0.71
RER1-203ENST00000378513 FAM83GA6ND36 823 aa19.51■□□□□ 0.71
RER1-203ENST00000378513 TBC1D32Q96NH3 1257 aa19.51■□□□□ 0.71
RER1-203ENST00000378513 DIP2CQ9Y2E4 1556 aa19.5■□□□□ 0.71
RER1-203ENST00000378513 NLRP1Q9C000 1473 aa19.49■□□□□ 0.71
RER1-203ENST00000378513 NSD2O96028 1365 aa19.49■□□□□ 0.71
RER1-203ENST00000378513 GZF1Q9H116 711 aaPredicted RBP19.49■□□□□ 0.71
RER1-203ENST00000378513 CD163L1Q9NR16 1453 aa19.49■□□□□ 0.71
RER1-203ENST00000378513 PTPRMP28827 1452 aa19.48■□□□□ 0.71
RER1-203ENST00000378513 DDX19BQ9UMR2 479 aa19.48■□□□□ 0.71
RER1-203ENST00000378513 ATAD2Q6PL18 1390 aa19.48■□□□□ 0.71
RER1-203ENST00000378513 C22orf23Q9BZE7 217 aa19.46■□□□□ 0.71
RER1-203ENST00000378513 RSPH6AQ9H0K4 717 aa19.46■□□□□ 0.71
RER1-203ENST00000378513 ZBTB40Q9NUA8 1239 aa19.45■□□□□ 0.7
RER1-203ENST00000378513 FOXD4L1Q9NU39 408 aa19.45■□□□□ 0.7
RER1-203ENST00000378513 PUS7Q96PZ0 661 aaKnown RBP19.44■□□□□ 0.7
RER1-203ENST00000378513 COL3A1P02461 1466 aaPredicted RBP19.44■□□□□ 0.7
RER1-203ENST00000378513 KRT24Q2M2I5 525 aa19.44■□□□□ 0.7
RER1-203ENST00000378513 ANKRD45Q5TZF3 282 aa19.43■□□□□ 0.7
RER1-203ENST00000378513 ANTXR1Q9H6X2 564 aa19.42■□□□□ 0.7
RER1-203ENST00000378513 APBB1O00213 710 aa19.41■□□□□ 0.7
RER1-203ENST00000378513 FCHSD2O94868 740 aa19.41■□□□□ 0.7
RER1-203ENST00000378513 C8orf58Q8NAV2 365 aa19.41■□□□□ 0.7
RER1-203ENST00000378513 MBIPQ9NS73 344 aa19.41■□□□□ 0.7
RER1-203ENST00000378513 NEO1Q92859 1461 aa19.4■□□□□ 0.7
RER1-203ENST00000378513 AEBP1Q8IUX7 1158 aa19.4■□□□□ 0.7
RER1-203ENST00000378513 USP32Q8NFA0 1604 aa19.4■□□□□ 0.7
RER1-203ENST00000378513 ADGRB2O60241 1585 aa19.4■□□□□ 0.7
RER1-203ENST00000378513 HDAC1Q13547 482 aaPredicted RBP19.4■□□□□ 0.7
RER1-203ENST00000378513 IPO8O15397 1037 aaKnown RBP19.39■□□□□ 0.69
RER1-203ENST00000378513 CFAP74Q9C0B2 1584 aa19.39■□□□□ 0.69
RER1-203ENST00000378513 VAMP4O75379 141 aa19.39■□□□□ 0.69
RER1-203ENST00000378513 SMC5Q8IY18 1101 aa19.38■□□□□ 0.69
RER1-203ENST00000378513 NFE2L2Q16236 605 aa19.38■□□□□ 0.69
RER1-203ENST00000378513 KIF16BQ96L93 1317 aa19.38■□□□□ 0.69
RER1-203ENST00000378513 TMEM131LA2VDJ0 1609 aa19.37■□□□□ 0.69
RER1-203ENST00000378513 ALKQ9UM73 1620 aa19.37■□□□□ 0.69
RER1-203ENST00000378513 ARHGAP31Q2M1Z3 1444 aa19.37■□□□□ 0.69
RER1-203ENST00000378513 AAMPQ13685 434 aa19.37■□□□□ 0.69
RER1-203ENST00000378513 LRRC7Q96NW7 1537 aa19.37■□□□□ 0.69
RER1-203ENST00000378513 CT47B1P0C2W7 299 aaPredicted RBP19.37■□□□□ 0.69
RER1-203ENST00000378513 CHD1LQ86WJ1 897 aa19.36■□□□□ 0.69
RER1-203ENST00000378513 NUDT16Q96DE0 195 aaKnown RBP19.36■□□□□ 0.69
RER1-203ENST00000378513 METP08581 1390 aa19.36■□□□□ 0.69
RER1-203ENST00000378513 ARHGEF40Q8TER5 1519 aa19.36■□□□□ 0.69
RER1-203ENST00000378513 TWISTNBQ3B726 338 aaPredicted RBP19.35■□□□□ 0.69
RER1-203ENST00000378513 MIS18AQ9NYP9 233 aa19.35■□□□□ 0.69
RER1-203ENST00000378513 IL13P35225 146 aa19.35■□□□□ 0.69
RER1-203ENST00000378513 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
RER1-203ENST00000378513 WASLO00401 505 aaPredicted RBP19.35■□□□□ 0.69
RER1-203ENST00000378513 MRPL50Q8N5N7 158 aaKnown RBP19.35■□□□□ 0.69
RER1-203ENST00000378513 PNPLA6Q8IY17 1366 aa19.34■□□□□ 0.69
RER1-203ENST00000378513 ZBTB7BO15156 539 aaPredicted RBP19.34■□□□□ 0.69
RER1-203ENST00000378513 NUCB1Q02818 461 aa19.34■□□□□ 0.69
RER1-203ENST00000378513 SIRT2Q8IXJ6 389 aa19.34■□□□□ 0.69
RER1-203ENST00000378513 TSPOAP1O95153 1857 aa19.34■□□□□ 0.69
RER1-203ENST00000378513 PREX1Q8TCU6 1659 aa19.34■□□□□ 0.69
RER1-203ENST00000378513 ZFYVE9O95405 1425 aa19.34■□□□□ 0.69
RER1-203ENST00000378513 IL16Q14005 1332 aa19.34■□□□□ 0.69
RER1-203ENST00000378513 MCM10Q7L590 875 aa19.34■□□□□ 0.69
RER1-203ENST00000378513 VIRMAQ69YN4 1812 aaKnown RBP19.34■□□□□ 0.69
RER1-203ENST00000378513 PPIP5K1Q6PFW1 1433 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms