RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 RRP1P56182 461 aaKnown RBP22.18■■□□□ 1.14
HLA-A-202ENST00000376806 GOLGA2Q08379 1002 aa22.18■■□□□ 1.14
HLA-A-202ENST00000376806 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
HLA-A-202ENST00000376806 NPHP4O75161 1426 aaPredicted RBP22.17■■□□□ 1.14
HLA-A-202ENST00000376806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.17■■□□□ 1.14
HLA-A-202ENST00000376806 AMOTL2Q9Y2J4 779 aa22.17■■□□□ 1.14
HLA-A-202ENST00000376806 STRCQ7RTU9 1775 aa22.16■■□□□ 1.14
HLA-A-202ENST00000376806 RUNDC1Q96C34 613 aa22.15■■□□□ 1.14
HLA-A-202ENST00000376806 NKTRP30414 1462 aaKnown RBP22.15■■□□□ 1.14
HLA-A-202ENST00000376806 CHD2O14647 1828 aaKnown RBP22.15■■□□□ 1.14
HLA-A-202ENST00000376806 DUSP27Q5VZP5 1158 aa22.15■■□□□ 1.14
HLA-A-202ENST00000376806 RGPD8O14715 1765 aaPredicted RBP22.15■■□□□ 1.14
HLA-A-202ENST00000376806 PIK3R4Q99570 1358 aa22.14■■□□□ 1.14
HLA-A-202ENST00000376806 SLFN5Q08AF3 891 aa22.13■■□□□ 1.13
HLA-A-202ENST00000376806 PNPLA6Q8IY17 1366 aa22.12■■□□□ 1.13
HLA-A-202ENST00000376806 FMN2Q9NZ56 1722 aa22.11■■□□□ 1.13
HLA-A-202ENST00000376806 TRMT2AQ8IZ69 625 aaKnown RBP22.1■■□□□ 1.13
HLA-A-202ENST00000376806 NALCNQ8IZF0 1738 aa22.1■■□□□ 1.13
HLA-A-202ENST00000376806 U2AF1L5P0DN76 240 aaPredicted RBP22.09■■□□□ 1.13
HLA-A-202ENST00000376806 U2AF1Q01081 240 aaKnown RBP eCLIP22.09■■□□□ 1.13
HLA-A-202ENST00000376806 NME9Q86XW9 330 aa22.09■■□□□ 1.13
HLA-A-202ENST00000376806 ZNF692Q9BU19 519 aaPredicted RBP22.09■■□□□ 1.13
HLA-A-202ENST00000376806 B4GALNT3Q6L9W6 998 aa22.08■■□□□ 1.13
HLA-A-202ENST00000376806 TCP11L2Q8N4U5 519 aa22.08■■□□□ 1.13
HLA-A-202ENST00000376806 CDK12Q9NYV4 1490 aaPredicted RBP22.08■■□□□ 1.12
HLA-A-202ENST00000376806 E9PSI1 815 aa22.07■■□□□ 1.12
HLA-A-202ENST00000376806 WWC1Q8IX03 1113 aa22.07■■□□□ 1.12
HLA-A-202ENST00000376806 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
HLA-A-202ENST00000376806 AATKQ6ZMQ8 1374 aa22.06■■□□□ 1.12
HLA-A-202ENST00000376806 USP6P35125 1406 aa22.06■■□□□ 1.12
HLA-A-202ENST00000376806 PLEKHG3A1L390 1219 aa22.06■■□□□ 1.12
HLA-A-202ENST00000376806 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
HLA-A-202ENST00000376806 DMRT2Q9Y5R5 561 aa22.05■■□□□ 1.12
HLA-A-202ENST00000376806 LRRC7Q96NW7 1537 aa22.05■■□□□ 1.12
HLA-A-202ENST00000376806 POLKQ9UBT6 870 aa22.05■■□□□ 1.12
HLA-A-202ENST00000376806 ACEP12821 1306 aa22.04■■□□□ 1.12
HLA-A-202ENST00000376806 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
HLA-A-202ENST00000376806 DIAPH1O60610 1272 aaKnown RBP22.04■■□□□ 1.12
HLA-A-202ENST00000376806 NCBP3Q53F19 620 aaKnown RBP22.04■■□□□ 1.12
HLA-A-202ENST00000376806 TSHZ2Q9NRE2 1034 aa22.04■■□□□ 1.12
HLA-A-202ENST00000376806 ZRANB1Q9UGI0 708 aa22.04■■□□□ 1.12
HLA-A-202ENST00000376806 RRP7AQ9Y3A4 280 aaKnown RBP22.04■■□□□ 1.12
HLA-A-202ENST00000376806 NUTM2FA1L443 756 aa22.03■■□□□ 1.12
HLA-A-202ENST00000376806 KCNA6P17658 529 aa22.03■■□□□ 1.12
HLA-A-202ENST00000376806 COG3Q96JB2 828 aa22.03■■□□□ 1.12
HLA-A-202ENST00000376806 CCDC27Q2M243 656 aa22.03■■□□□ 1.12
HLA-A-202ENST00000376806 ANKARQ7Z5J8 1434 aa22.02■■□□□ 1.12
HLA-A-202ENST00000376806 OVOS2A0A0J9YW53 1432 aa22.02■■□□□ 1.12
HLA-A-202ENST00000376806 OVOS2Q6IE36 1432 aa22.02■■□□□ 1.12
HLA-A-202ENST00000376806 TTC21BQ7Z4L5 1316 aa22.01■■□□□ 1.11
HLA-A-202ENST00000376806 NEUROD2Q15784 382 aa22.01■■□□□ 1.11
HLA-A-202ENST00000376806 PLEKHF1Q96S99 279 aa22■■□□□ 1.11
HLA-A-202ENST00000376806 SSH2Q76I76 1423 aa22■■□□□ 1.11
HLA-A-202ENST00000376806 FBLN1P23142 703 aa22■■□□□ 1.11
HLA-A-202ENST00000376806 WDR63Q8IWG1 891 aa21.98■■□□□ 1.11
HLA-A-202ENST00000376806 EXOC6Q8TAG9 804 aa21.98■■□□□ 1.11
HLA-A-202ENST00000376806 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
HLA-A-202ENST00000376806 PIK3C2AO00443 1686 aa21.98■■□□□ 1.11
HLA-A-202ENST00000376806 PLIN1O60240 522 aa21.98■■□□□ 1.11
HLA-A-202ENST00000376806 CCDC136Q96JN2 1154 aa21.98■■□□□ 1.11
HLA-A-202ENST00000376806 MAPK8IP3Q9UPT6 1336 aa21.97■■□□□ 1.11
HLA-A-202ENST00000376806 PPM1GO15355 546 aaPredicted RBP21.97■■□□□ 1.11
HLA-A-202ENST00000376806 NWD1Q149M9 1564 aa21.96■■□□□ 1.11
HLA-A-202ENST00000376806 RBM33Q96EV2 1170 aaKnown RBP21.96■■□□□ 1.11
HLA-A-202ENST00000376806 USP54Q70EL1 1684 aa21.96■■□□□ 1.11
HLA-A-202ENST00000376806 PEAK1Q9H792 1746 aa21.95■■□□□ 1.11
HLA-A-202ENST00000376806 PNNQ9H307 717 aaKnown RBP21.94■■□□□ 1.1
HLA-A-202ENST00000376806 TTC21AQ8NDW8 1320 aa21.94■■□□□ 1.1
HLA-A-202ENST00000376806 ZNF335Q9H4Z2 1342 aaPredicted RBP21.94■■□□□ 1.1
HLA-A-202ENST00000376806 MARF1Q9Y4F3 1742 aaKnown RBP21.94■■□□□ 1.1
HLA-A-202ENST00000376806 STRCP1A6NGW2 1772 aa21.93■■□□□ 1.1
HLA-A-202ENST00000376806 TMPOP42166 694 aaKnown RBP21.93■■□□□ 1.1
HLA-A-202ENST00000376806 PMFBP1Q8TBY8 1022 aa21.93■■□□□ 1.1
HLA-A-202ENST00000376806 USP31Q70CQ4 1352 aa21.92■■□□□ 1.1
HLA-A-202ENST00000376806 FCHSD2O94868 740 aa21.92■■□□□ 1.1
HLA-A-202ENST00000376806 RRS1Q15050 365 aaKnown RBP21.92■■□□□ 1.1
HLA-A-202ENST00000376806 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.92■■□□□ 1.1
HLA-A-202ENST00000376806 RSPH6AQ9H0K4 717 aa21.92■■□□□ 1.1
HLA-A-202ENST00000376806 ADGRL3Q9HAR2 1447 aa21.92■■□□□ 1.1
HLA-A-202ENST00000376806 IL13P35225 146 aa21.91■■□□□ 1.1
HLA-A-202ENST00000376806 DLG5Q8TDM6 1919 aa21.91■■□□□ 1.1
HLA-A-202ENST00000376806 CRBNQ96SW2 442 aa21.9■■□□□ 1.1
HLA-A-202ENST00000376806 NGDNQ8NEJ9 315 aaKnown RBP21.9■■□□□ 1.1
HLA-A-202ENST00000376806 RGPD1P0DJD0 1748 aa21.89■■□□□ 1.1
HLA-A-202ENST00000376806 C20orf194Q5TEA3 1177 aa21.89■■□□□ 1.09
HLA-A-202ENST00000376806 MYH16Q9H6N6 1097 aa21.88■■□□□ 1.09
HLA-A-202ENST00000376806 TRIM35Q9UPQ4 493 aa21.88■■□□□ 1.09
HLA-A-202ENST00000376806 PRKAR2BP31323 418 aa21.88■■□□□ 1.09
HLA-A-202ENST00000376806 PROSER2Q86WR7 435 aaPredicted RBP21.86■■□□□ 1.09
HLA-A-202ENST00000376806 BCAR3O75815 825 aa21.85■■□□□ 1.09
HLA-A-202ENST00000376806 IL16Q14005 1332 aa21.84■■□□□ 1.09
HLA-A-202ENST00000376806 NEFMP07197 916 aa21.84■■□□□ 1.09
HLA-A-202ENST00000376806 HMOX1P09601 288 aa21.84■■□□□ 1.09
HLA-A-202ENST00000376806 RIPK4P57078 832 aa21.84■■□□□ 1.09
HLA-A-202ENST00000376806 FANCIQ9NVI1 1328 aa21.82■■□□□ 1.08
HLA-A-202ENST00000376806 TMEM94Q12767 1356 aa21.8■■□□□ 1.08
HLA-A-202ENST00000376806 NFE2L2Q16236 605 aa21.8■■□□□ 1.08
HLA-A-202ENST00000376806 EIF4A2Q14240 407 aaKnown RBP21.79■■□□□ 1.08
HLA-A-202ENST00000376806 PHACTR3Q96KR7 559 aa21.79■■□□□ 1.08
HLA-A-202ENST00000376806 RARSP54136 660 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms