RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
TRIM40-206ENST00000376724 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
TRIM40-206ENST00000376724 NPHP4O75161 1426 aaPredicted RBP17.05■□□□□ 0.32
TRIM40-206ENST00000376724 MON2Q7Z3U7 1717 aa17.05■□□□□ 0.32
TRIM40-206ENST00000376724 COG3Q96JB2 828 aa17.05■□□□□ 0.32
TRIM40-206ENST00000376724 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
TRIM40-206ENST00000376724 AKAP12Q02952 1782 aa17.05■□□□□ 0.32
TRIM40-206ENST00000376724 NEUROD2Q15784 382 aa17.04■□□□□ 0.32
TRIM40-206ENST00000376724 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
TRIM40-206ENST00000376724 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
TRIM40-206ENST00000376724 GOLGA2Q08379 1002 aa17.04■□□□□ 0.32
TRIM40-206ENST00000376724 RCAN3Q9UKA8 241 aa17.04■□□□□ 0.32
TRIM40-206ENST00000376724 POLKQ9UBT6 870 aa17.03■□□□□ 0.32
TRIM40-206ENST00000376724 RRP7AQ9Y3A4 280 aaKnown RBP17.03■□□□□ 0.32
TRIM40-206ENST00000376724 ZNF521Q96K83 1311 aa17.03■□□□□ 0.32
TRIM40-206ENST00000376724 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
TRIM40-206ENST00000376724 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
TRIM40-206ENST00000376724 TTC21BQ7Z4L5 1316 aa17.02■□□□□ 0.32
TRIM40-206ENST00000376724 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.32
TRIM40-206ENST00000376724 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.32
TRIM40-206ENST00000376724 EMILIN1Q9Y6C2 1016 aa17.01■□□□□ 0.31
TRIM40-206ENST00000376724 USP6P35125 1406 aa17.01■□□□□ 0.31
TRIM40-206ENST00000376724 RGPD8O14715 1765 aaPredicted RBP17.01■□□□□ 0.31
TRIM40-206ENST00000376724 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
TRIM40-206ENST00000376724 RNF123Q5XPI4 1314 aa17■□□□□ 0.31
TRIM40-206ENST00000376724 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
TRIM40-206ENST00000376724 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
TRIM40-206ENST00000376724 C14orf37Q86TY3 774 aa16.99■□□□□ 0.31
TRIM40-206ENST00000376724 PNPLA6Q8IY17 1366 aa16.98■□□□□ 0.31
TRIM40-206ENST00000376724 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
TRIM40-206ENST00000376724 SLFN5Q08AF3 891 aa16.98■□□□□ 0.31
TRIM40-206ENST00000376724 NGEFQ8N5V2 710 aa16.98■□□□□ 0.31
TRIM40-206ENST00000376724 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
TRIM40-206ENST00000376724 ERICH6BQ5W0A0 696 aa16.97■□□□□ 0.31
TRIM40-206ENST00000376724 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
TRIM40-206ENST00000376724 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
TRIM40-206ENST00000376724 NRKQ7Z2Y5 1582 aa16.97■□□□□ 0.31
TRIM40-206ENST00000376724 SOX12O15370 315 aa16.96■□□□□ 0.31
TRIM40-206ENST00000376724 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.31
TRIM40-206ENST00000376724 NALCNQ8IZF0 1738 aa16.96■□□□□ 0.31
TRIM40-206ENST00000376724 ANKARQ7Z5J8 1434 aa16.96■□□□□ 0.31
TRIM40-206ENST00000376724 AATKQ6ZMQ8 1374 aa16.95■□□□□ 0.3
TRIM40-206ENST00000376724 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
TRIM40-206ENST00000376724 PPP4R2Q9NY27 417 aa16.95■□□□□ 0.3
TRIM40-206ENST00000376724 FMN2Q9NZ56 1722 aa16.95■□□□□ 0.3
TRIM40-206ENST00000376724 E9PSI1 815 aa16.94■□□□□ 0.3
TRIM40-206ENST00000376724 MAPK8IP3Q9UPT6 1336 aa16.94■□□□□ 0.3
TRIM40-206ENST00000376724 HSPA2P54652 639 aa16.94■□□□□ 0.3
TRIM40-206ENST00000376724 PLEKHF1Q96S99 279 aa16.94■□□□□ 0.3
TRIM40-206ENST00000376724 SSH2Q76I76 1423 aa16.93■□□□□ 0.3
TRIM40-206ENST00000376724 TTC21AQ8NDW8 1320 aa16.93■□□□□ 0.3
TRIM40-206ENST00000376724 TRMT2AQ8IZ69 625 aaKnown RBP16.92■□□□□ 0.3
TRIM40-206ENST00000376724 PROSER2Q86WR7 435 aaPredicted RBP16.92■□□□□ 0.3
TRIM40-206ENST00000376724 OVOS2A0A0J9YW53 1432 aa16.92■□□□□ 0.3
TRIM40-206ENST00000376724 OVOS2Q6IE36 1432 aa16.92■□□□□ 0.3
TRIM40-206ENST00000376724 ADGRL3Q9HAR2 1447 aa16.92■□□□□ 0.3
TRIM40-206ENST00000376724 PLIN1O60240 522 aa16.91■□□□□ 0.3
TRIM40-206ENST00000376724 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
TRIM40-206ENST00000376724 HMOX1P09601 288 aa16.91■□□□□ 0.3
TRIM40-206ENST00000376724 PHF8Q9UPP1 1060 aa16.91■□□□□ 0.3
TRIM40-206ENST00000376724 IL13P35225 146 aa16.91■□□□□ 0.3
TRIM40-206ENST00000376724 ESCO1Q5FWF5 840 aa16.91■□□□□ 0.3
TRIM40-206ENST00000376724 NUTM2GQ5VZR2 741 aa16.91■□□□□ 0.3
TRIM40-206ENST00000376724 B4GALNT3Q6L9W6 998 aa16.91■□□□□ 0.3
TRIM40-206ENST00000376724 PNNQ9H307 717 aaKnown RBP16.91■□□□□ 0.3
TRIM40-206ENST00000376724 CDK12Q9NYV4 1490 aaPredicted RBP16.9■□□□□ 0.3
TRIM40-206ENST00000376724 KDM4FA0A1W2PPD8 638 aa16.89■□□□□ 0.29
TRIM40-206ENST00000376724 FCHSD2O94868 740 aa16.89■□□□□ 0.29
TRIM40-206ENST00000376724 PRKAR2BP31323 418 aa16.89■□□□□ 0.29
TRIM40-206ENST00000376724 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.29
TRIM40-206ENST00000376724 NLRP6P59044 892 aa16.89■□□□□ 0.29
TRIM40-206ENST00000376724 CCDC27Q2M243 656 aa16.89■□□□□ 0.29
TRIM40-206ENST00000376724 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
TRIM40-206ENST00000376724 WDR63Q8IWG1 891 aa16.88■□□□□ 0.29
TRIM40-206ENST00000376724 RSPH6AQ9H0K4 717 aa16.88■□□□□ 0.29
TRIM40-206ENST00000376724 NEFMP07197 916 aa16.87■□□□□ 0.29
TRIM40-206ENST00000376724 RIPK4P57078 832 aa16.87■□□□□ 0.29
TRIM40-206ENST00000376724 ABTB2Q8N961 1025 aa16.87■□□□□ 0.29
TRIM40-206ENST00000376724 USP31Q70CQ4 1352 aa16.87■□□□□ 0.29
TRIM40-206ENST00000376724 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
TRIM40-206ENST00000376724 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
TRIM40-206ENST00000376724 PSME1Q06323 249 aa16.86■□□□□ 0.29
TRIM40-206ENST00000376724 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
TRIM40-206ENST00000376724 HSP90AB2PQ58FF8 381 aa16.85■□□□□ 0.29
TRIM40-206ENST00000376724 EXOC6Q8TAG9 804 aa16.85■□□□□ 0.29
TRIM40-206ENST00000376724 ORAI2Q96SN7 254 aa16.85■□□□□ 0.29
TRIM40-206ENST00000376724 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
TRIM40-206ENST00000376724 EIF4A2Q14240 407 aaKnown RBP16.84■□□□□ 0.29
TRIM40-206ENST00000376724 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
TRIM40-206ENST00000376724 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
TRIM40-206ENST00000376724 MAP3K19Q56UN5 1328 aa16.84■□□□□ 0.29
TRIM40-206ENST00000376724 CCDC136Q96JN2 1154 aa16.82■□□□□ 0.28
TRIM40-206ENST00000376724 PEAK1Q9H792 1746 aa16.82■□□□□ 0.28
TRIM40-206ENST00000376724 FOXO3O43524 673 aa16.82■□□□□ 0.28
TRIM40-206ENST00000376724 BCAR3O75815 825 aa16.82■□□□□ 0.28
TRIM40-206ENST00000376724 AMPHP49418 695 aa16.82■□□□□ 0.28
TRIM40-206ENST00000376724 XPCQ01831 940 aaPredicted RBP16.82■□□□□ 0.28
TRIM40-206ENST00000376724 MYH16Q9H6N6 1097 aa16.82■□□□□ 0.28
TRIM40-206ENST00000376724 C19orf44Q9H6X5 657 aa16.82■□□□□ 0.28
TRIM40-206ENST00000376724 C20orf194Q5TEA3 1177 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms