RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 SOX12O15370 315 aa16.69■□□□□ 0.26
CLCN6-206ENST00000376496 EMILIN1Q9Y6C2 1016 aa16.69■□□□□ 0.26
CLCN6-206ENST00000376496 INSRP06213 1382 aa16.69■□□□□ 0.26
CLCN6-206ENST00000376496 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
CLCN6-206ENST00000376496 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
CLCN6-206ENST00000376496 RRS1Q15050 365 aaKnown RBP16.67■□□□□ 0.26
CLCN6-206ENST00000376496 POLKQ9UBT6 870 aa16.67■□□□□ 0.26
CLCN6-206ENST00000376496 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
CLCN6-206ENST00000376496 AKAP12Q02952 1782 aa16.66■□□□□ 0.26
CLCN6-206ENST00000376496 MON2Q7Z3U7 1717 aa16.66■□□□□ 0.26
CLCN6-206ENST00000376496 CHD2O14647 1828 aaKnown RBP16.66■□□□□ 0.26
CLCN6-206ENST00000376496 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
CLCN6-206ENST00000376496 NGDNQ8NEJ9 315 aaKnown RBP16.66■□□□□ 0.26
CLCN6-206ENST00000376496 TOPAZ1Q8N9V7 1692 aa16.66■□□□□ 0.26
CLCN6-206ENST00000376496 TTC21BQ7Z4L5 1316 aa16.66■□□□□ 0.26
CLCN6-206ENST00000376496 PIK3R4Q99570 1358 aa16.65■□□□□ 0.26
CLCN6-206ENST00000376496 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
CLCN6-206ENST00000376496 COG3Q96JB2 828 aa16.65■□□□□ 0.26
CLCN6-206ENST00000376496 ZNF692Q9BU19 519 aaPredicted RBP16.65■□□□□ 0.26
CLCN6-206ENST00000376496 PDE3BQ13370 1112 aa16.64■□□□□ 0.25
CLCN6-206ENST00000376496 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
CLCN6-206ENST00000376496 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
CLCN6-206ENST00000376496 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
CLCN6-206ENST00000376496 KDM4FA0A1W2PPD8 638 aa16.63■□□□□ 0.25
CLCN6-206ENST00000376496 MAP2P11137 1827 aaKnown RBP16.63■□□□□ 0.25
CLCN6-206ENST00000376496 NUTM2GQ5VZR2 741 aa16.63■□□□□ 0.25
CLCN6-206ENST00000376496 USP6P35125 1406 aa16.63■□□□□ 0.25
CLCN6-206ENST00000376496 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
CLCN6-206ENST00000376496 NALCNQ8IZF0 1738 aa16.62■□□□□ 0.25
CLCN6-206ENST00000376496 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
CLCN6-206ENST00000376496 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
CLCN6-206ENST00000376496 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
CLCN6-206ENST00000376496 DUSP27Q5VZP5 1158 aa16.6■□□□□ 0.25
CLCN6-206ENST00000376496 HMOX1P09601 288 aa16.59■□□□□ 0.25
CLCN6-206ENST00000376496 NRKQ7Z2Y5 1582 aa16.59■□□□□ 0.25
CLCN6-206ENST00000376496 PLIN1O60240 522 aa16.59■□□□□ 0.25
CLCN6-206ENST00000376496 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
CLCN6-206ENST00000376496 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
CLCN6-206ENST00000376496 PROSER2Q86WR7 435 aaPredicted RBP16.58■□□□□ 0.24
CLCN6-206ENST00000376496 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.24
CLCN6-206ENST00000376496 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
CLCN6-206ENST00000376496 FMN2Q9NZ56 1722 aa16.58■□□□□ 0.24
CLCN6-206ENST00000376496 PNPLA6Q8IY17 1366 aa16.58■□□□□ 0.24
CLCN6-206ENST00000376496 ESCO1Q5FWF5 840 aa16.57■□□□□ 0.24
CLCN6-206ENST00000376496 RNF123Q5XPI4 1314 aa16.56■□□□□ 0.24
CLCN6-206ENST00000376496 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
CLCN6-206ENST00000376496 SSH2Q76I76 1423 aa16.56■□□□□ 0.24
CLCN6-206ENST00000376496 XPCQ01831 940 aaPredicted RBP16.56■□□□□ 0.24
CLCN6-206ENST00000376496 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
CLCN6-206ENST00000376496 RRP1P56182 461 aaKnown RBP16.55■□□□□ 0.24
CLCN6-206ENST00000376496 ORAI2Q96SN7 254 aa16.55■□□□□ 0.24
CLCN6-206ENST00000376496 PHF8Q9UPP1 1060 aa16.55■□□□□ 0.24
CLCN6-206ENST00000376496 ADGRL3Q9HAR2 1447 aa16.55■□□□□ 0.24
CLCN6-206ENST00000376496 B4GALNT3Q6L9W6 998 aa16.55■□□□□ 0.24
CLCN6-206ENST00000376496 OVOS2A0A0J9YW53 1432 aa16.54■□□□□ 0.24
CLCN6-206ENST00000376496 OVOS2Q6IE36 1432 aa16.54■□□□□ 0.24
CLCN6-206ENST00000376496 ANKARQ7Z5J8 1434 aa16.54■□□□□ 0.24
CLCN6-206ENST00000376496 PRKAR2BP31323 418 aa16.53■□□□□ 0.24
CLCN6-206ENST00000376496 NLRP6P59044 892 aa16.53■□□□□ 0.24
CLCN6-206ENST00000376496 IL13P35225 146 aa16.53■□□□□ 0.24
CLCN6-206ENST00000376496 AATKQ6ZMQ8 1374 aa16.53■□□□□ 0.24
CLCN6-206ENST00000376496 HSP90AB2PQ58FF8 381 aa16.52■□□□□ 0.24
CLCN6-206ENST00000376496 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
CLCN6-206ENST00000376496 PHACTR3Q96KR7 559 aa16.52■□□□□ 0.23
CLCN6-206ENST00000376496 TMPOP42166 694 aaKnown RBP16.51■□□□□ 0.23
CLCN6-206ENST00000376496 TRMT2AQ8IZ69 625 aaKnown RBP16.51■□□□□ 0.23
CLCN6-206ENST00000376496 ABTB2Q8N961 1025 aa16.51■□□□□ 0.23
CLCN6-206ENST00000376496 FOXO3O43524 673 aa16.51■□□□□ 0.23
CLCN6-206ENST00000376496 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
CLCN6-206ENST00000376496 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
CLCN6-206ENST00000376496 LRRC7Q96NW7 1537 aa16.5■□□□□ 0.23
CLCN6-206ENST00000376496 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
CLCN6-206ENST00000376496 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
CLCN6-206ENST00000376496 E9PSI1 815 aa16.5■□□□□ 0.23
CLCN6-206ENST00000376496 AEBP1Q8IUX7 1158 aa16.49■□□□□ 0.23
CLCN6-206ENST00000376496 PPP4R2Q9NY27 417 aa16.49■□□□□ 0.23
CLCN6-206ENST00000376496 MAP3K19Q56UN5 1328 aa16.49■□□□□ 0.23
CLCN6-206ENST00000376496 STRCP1A6NGW2 1772 aa16.49■□□□□ 0.23
CLCN6-206ENST00000376496 PSME1Q06323 249 aa16.49■□□□□ 0.23
CLCN6-206ENST00000376496 EIF4A2Q14240 407 aaKnown RBP16.49■□□□□ 0.23
CLCN6-206ENST00000376496 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
CLCN6-206ENST00000376496 PEAK1Q9H792 1746 aa16.49■□□□□ 0.23
CLCN6-206ENST00000376496 RIPK4P57078 832 aa16.49■□□□□ 0.23
CLCN6-206ENST00000376496 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
CLCN6-206ENST00000376496 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
CLCN6-206ENST00000376496 TRIM35Q9UPQ4 493 aa16.49■□□□□ 0.23
CLCN6-206ENST00000376496 NWD1Q149M9 1564 aa16.48■□□□□ 0.23
CLCN6-206ENST00000376496 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
CLCN6-206ENST00000376496 FCHSD2O94868 740 aa16.47■□□□□ 0.23
CLCN6-206ENST00000376496 BCAR3O75815 825 aa16.47■□□□□ 0.23
CLCN6-206ENST00000376496 DDX17Q92841 729 aaKnown RBP16.47■□□□□ 0.23
CLCN6-206ENST00000376496 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
CLCN6-206ENST00000376496 USP31Q70CQ4 1352 aa16.47■□□□□ 0.23
CLCN6-206ENST00000376496 LMTK3Q96Q04 1460 aa16.47■□□□□ 0.23
CLCN6-206ENST00000376496 LMOD2Q6P5Q4 547 aa16.46■□□□□ 0.23
CLCN6-206ENST00000376496 THUMPD2Q9BTF0 503 aaKnown RBP16.46■□□□□ 0.23
CLCN6-206ENST00000376496 ZBTB7CA1YPR0 619 aa16.46■□□□□ 0.23
CLCN6-206ENST00000376496 NGEFQ8N5V2 710 aa16.45■□□□□ 0.22
CLCN6-206ENST00000376496 AMPHP49418 695 aa16.45■□□□□ 0.22
CLCN6-206ENST00000376496 SULT6B1Q6IMI4 303 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms