RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 TMEM2Q9UHN6 1383 aa24.43■■□□□ 1.5
PPP1R3F-202ENST00000376188 PLEKHF1Q96S99 279 aa24.42■■□□□ 1.5
PPP1R3F-202ENST00000376188 BACH2Q9BYV9 841 aa24.42■■□□□ 1.5
PPP1R3F-202ENST00000376188 CPSF1Q10570 1443 aaKnown RBP24.42■■□□□ 1.5
PPP1R3F-202ENST00000376188 MAP2P11137 1827 aaKnown RBP24.41■■□□□ 1.5
PPP1R3F-202ENST00000376188 CANXP27824 592 aaKnown RBP24.41■■□□□ 1.5
PPP1R3F-202ENST00000376188 PNNQ9H307 717 aaKnown RBP24.41■■□□□ 1.5
PPP1R3F-202ENST00000376188 MAPK8IP3Q9UPT6 1336 aa24.41■■□□□ 1.5
PPP1R3F-202ENST00000376188 EDC4Q6P2E9 1401 aaKnown RBP24.41■■□□□ 1.5
PPP1R3F-202ENST00000376188 DIAPH1O60610 1272 aaKnown RBP24.41■■□□□ 1.5
PPP1R3F-202ENST00000376188 PPIP5K1Q6PFW1 1433 aa24.41■■□□□ 1.5
PPP1R3F-202ENST00000376188 RARSP54136 660 aaKnown RBP24.4■■□□□ 1.5
PPP1R3F-202ENST00000376188 MON2Q7Z3U7 1717 aa24.4■■□□□ 1.5
PPP1R3F-202ENST00000376188 ITSN1Q15811 1721 aa24.38■■□□□ 1.49
PPP1R3F-202ENST00000376188 AKAP12Q02952 1782 aa24.38■■□□□ 1.49
PPP1R3F-202ENST00000376188 TXNDC2Q86VQ3 553 aa24.37■■□□□ 1.49
PPP1R3F-202ENST00000376188 IPO9Q96P70 1041 aaKnown RBP24.37■■□□□ 1.49
PPP1R3F-202ENST00000376188 CT47B1P0C2W7 299 aaPredicted RBP24.37■■□□□ 1.49
PPP1R3F-202ENST00000376188 TMPOP42166 694 aaKnown RBP24.37■■□□□ 1.49
PPP1R3F-202ENST00000376188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.37■■□□□ 1.49
PPP1R3F-202ENST00000376188 NOP58Q9Y2X3 529 aaKnown RBP24.36■■□□□ 1.49
PPP1R3F-202ENST00000376188 AAMPQ13685 434 aa24.35■■□□□ 1.49
PPP1R3F-202ENST00000376188 IL16Q14005 1332 aa24.34■■□□□ 1.49
PPP1R3F-202ENST00000376188 ADAMTS13Q76LX8 1427 aa24.34■■□□□ 1.49
PPP1R3F-202ENST00000376188 NUDT16Q96DE0 195 aaKnown RBP24.33■■□□□ 1.49
PPP1R3F-202ENST00000376188 CCDC61Q9Y6R9 512 aa24.33■■□□□ 1.48
PPP1R3F-202ENST00000376188 PLEKHG1Q9ULL1 1385 aa24.32■■□□□ 1.48
PPP1R3F-202ENST00000376188 FRAT1Q92837 279 aaPredicted RBP24.32■■□□□ 1.48
PPP1R3F-202ENST00000376188 POLKQ9UBT6 870 aa24.32■■□□□ 1.48
PPP1R3F-202ENST00000376188 LRRC7Q96NW7 1537 aa24.32■■□□□ 1.48
PPP1R3F-202ENST00000376188 FCHSD2O94868 740 aa24.32■■□□□ 1.48
PPP1R3F-202ENST00000376188 CLUAP1Q96AJ1 413 aa24.32■■□□□ 1.48
PPP1R3F-202ENST00000376188 C3P01024 1663 aa24.31■■□□□ 1.48
PPP1R3F-202ENST00000376188 TRIM35Q9UPQ4 493 aa24.31■■□□□ 1.48
PPP1R3F-202ENST00000376188 PANK1Q8TE04 598 aa24.31■■□□□ 1.48
PPP1R3F-202ENST00000376188 COG6Q9Y2V7 657 aa24.3■■□□□ 1.48
PPP1R3F-202ENST00000376188 CDK12Q9NYV4 1490 aaPredicted RBP24.3■■□□□ 1.48
PPP1R3F-202ENST00000376188 AATKQ6ZMQ8 1374 aa24.3■■□□□ 1.48
PPP1R3F-202ENST00000376188 SKAP1Q86WV1 359 aa24.29■■□□□ 1.48
PPP1R3F-202ENST00000376188 RIPK4P57078 832 aa24.27■■□□□ 1.48
PPP1R3F-202ENST00000376188 ROBO2Q9HCK4 1378 aa24.27■■□□□ 1.48
PPP1R3F-202ENST00000376188 NEFMP07197 916 aa24.27■■□□□ 1.48
PPP1R3F-202ENST00000376188 TOPAZ1Q8N9V7 1692 aa24.27■■□□□ 1.47
PPP1R3F-202ENST00000376188 ZNF692Q9BU19 519 aaPredicted RBP24.26■■□□□ 1.47
PPP1R3F-202ENST00000376188 FER1L4A9Z1Z3 1794 aa24.26■■□□□ 1.47
PPP1R3F-202ENST00000376188 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.26■■□□□ 1.47
PPP1R3F-202ENST00000376188 PPM1GO15355 546 aaPredicted RBP24.25■■□□□ 1.47
PPP1R3F-202ENST00000376188 NME9Q86XW9 330 aa24.25■■□□□ 1.47
PPP1R3F-202ENST00000376188 ZBTB47Q9UFB7 747 aaPredicted RBP24.25■■□□□ 1.47
PPP1R3F-202ENST00000376188 RSPH6AQ9H0K4 717 aa24.25■■□□□ 1.47
PPP1R3F-202ENST00000376188 TSR2Q969E8 191 aaKnown RBP24.24■■□□□ 1.47
PPP1R3F-202ENST00000376188 COG3Q96JB2 828 aa24.24■■□□□ 1.47
PPP1R3F-202ENST00000376188 SLIT1O75093 1534 aa24.24■■□□□ 1.47
PPP1R3F-202ENST00000376188 BCL2L13Q9BXK5 485 aa24.24■■□□□ 1.47
PPP1R3F-202ENST00000376188 LTKP29376 864 aa24.23■■□□□ 1.47
PPP1R3F-202ENST00000376188 NPM2Q86SE8 214 aaKnown RBP24.23■■□□□ 1.47
PPP1R3F-202ENST00000376188 EXOSC9Q06265 439 aaKnown RBP24.22■■□□□ 1.47
PPP1R3F-202ENST00000376188 ZKSCAN2Q63HK3 967 aa24.22■■□□□ 1.47
PPP1R3F-202ENST00000376188 NRKQ7Z2Y5 1582 aa24.22■■□□□ 1.47
PPP1R3F-202ENST00000376188 PRR36Q9H6K5 1346 aa24.22■■□□□ 1.47
PPP1R3F-202ENST00000376188 PRKAR2BP31323 418 aa24.22■■□□□ 1.47
PPP1R3F-202ENST00000376188 FAM161AQ3B820 660 aa24.22■■□□□ 1.47
PPP1R3F-202ENST00000376188 EID1Q9Y6B2 187 aa24.22■■□□□ 1.47
PPP1R3F-202ENST00000376188 ARHGAP23Q9P227 1491 aa24.21■■□□□ 1.47
PPP1R3F-202ENST00000376188 IGHDP01880 384 aa24.21■■□□□ 1.47
PPP1R3F-202ENST00000376188 PMFBP1Q8TBY8 1022 aa24.21■■□□□ 1.47
PPP1R3F-202ENST00000376188 PAK3O75914 559 aaPredicted RBP24.21■■□□□ 1.47
PPP1R3F-202ENST00000376188 RLBP1P12271 317 aa24.21■■□□□ 1.47
PPP1R3F-202ENST00000376188 FBLN1P23142 703 aa24.21■■□□□ 1.47
PPP1R3F-202ENST00000376188 EMILIN1Q9Y6C2 1016 aa24.21■■□□□ 1.47
PPP1R3F-202ENST00000376188 VIRMAQ69YN4 1812 aaKnown RBP24.21■■□□□ 1.47
PPP1R3F-202ENST00000376188 NCKAP5LQ9HCH0 1330 aa24.2■■□□□ 1.46
PPP1R3F-202ENST00000376188 IL13P35225 146 aa24.19■■□□□ 1.46
PPP1R3F-202ENST00000376188 SMC4Q9NTJ3 1288 aa24.19■■□□□ 1.46
PPP1R3F-202ENST00000376188 CEBPAP49715 358 aaPredicted RBP24.18■■□□□ 1.46
PPP1R3F-202ENST00000376188 RGS3P49796 1198 aa24.18■■□□□ 1.46
PPP1R3F-202ENST00000376188 DIP2AQ14689 1571 aa24.17■■□□□ 1.46
PPP1R3F-202ENST00000376188 MVPQ14764 893 aaKnown RBP24.16■■□□□ 1.46
PPP1R3F-202ENST00000376188 NFE2L2Q16236 605 aa24.16■■□□□ 1.46
PPP1R3F-202ENST00000376188 FTSJ3Q8IY81 847 aaKnown RBP24.16■■□□□ 1.46
PPP1R3F-202ENST00000376188 ZRANB1Q9UGI0 708 aa24.16■■□□□ 1.46
PPP1R3F-202ENST00000376188 DZIP1LQ8IYY4 767 aaKnown RBP24.16■■□□□ 1.46
PPP1R3F-202ENST00000376188 TNNQ9UQP3 1299 aa24.16■■□□□ 1.46
PPP1R3F-202ENST00000376188 CALD1Q05682 793 aaKnown RBP24.15■■□□□ 1.46
PPP1R3F-202ENST00000376188 PTPRUQ92729 1446 aa24.15■■□□□ 1.46
PPP1R3F-202ENST00000376188 C8orf34Q49A92 452 aa24.15■■□□□ 1.46
PPP1R3F-202ENST00000376188 DLG5Q8TDM6 1919 aa24.15■■□□□ 1.46
PPP1R3F-202ENST00000376188 PLEKHG3A1L390 1219 aa24.14■■□□□ 1.46
PPP1R3F-202ENST00000376188 PTCH1Q13635 1447 aa24.14■■□□□ 1.46
PPP1R3F-202ENST00000376188 SSH1Q8WYL5 1049 aa24.14■■□□□ 1.45
PPP1R3F-202ENST00000376188 NALCNQ8IZF0 1738 aa24.14■■□□□ 1.45
PPP1R3F-202ENST00000376188 HMOX1P09601 288 aa24.13■■□□□ 1.45
PPP1R3F-202ENST00000376188 ZNF428Q96B54 188 aa24.13■■□□□ 1.45
PPP1R3F-202ENST00000376188 DDRGK1Q96HY6 314 aa24.13■■□□□ 1.45
PPP1R3F-202ENST00000376188 KIF16BQ96L93 1317 aa24.12■■□□□ 1.45
PPP1R3F-202ENST00000376188 TBX22Q9Y458 520 aa24.12■■□□□ 1.45
PPP1R3F-202ENST00000376188 TTC21BQ7Z4L5 1316 aa24.12■■□□□ 1.45
PPP1R3F-202ENST00000376188 SLC26A8Q96RN1 970 aa24.12■■□□□ 1.45
PPP1R3F-202ENST00000376188 PCDHB15Q9Y5E8 787 aa24.12■■□□□ 1.45
PPP1R3F-202ENST00000376188 USP6P35125 1406 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms