RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 PXDNQ92626 1479 aa24.42■■□□□ 1.5
C6orf48-204ENST00000375639 USP6P35125 1406 aa24.42■■□□□ 1.5
C6orf48-204ENST00000375639 AKAP12Q02952 1782 aa24.42■■□□□ 1.5
C6orf48-204ENST00000375639 LMOD2Q6P5Q4 547 aa24.39■■□□□ 1.49
C6orf48-204ENST00000375639 LRRC59Q96AG4 307 aaKnown RBP24.39■■□□□ 1.49
C6orf48-204ENST00000375639 UPF1Q92900 1129 aaKnown RBP eCLIP24.38■■□□□ 1.495e-22■□□□□ 9.9
C6orf48-204ENST00000375639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.37■■□□□ 1.49
C6orf48-204ENST00000375639 CARD14Q9BXL6 1004 aa24.37■■□□□ 1.49
C6orf48-204ENST00000375639 SBNO1A3KN83 1393 aa24.37■■□□□ 1.49
C6orf48-204ENST00000375639 BRD4O60885 1362 aaPredicted RBP24.37■■□□□ 1.49
C6orf48-204ENST00000375639 SPATA31A3Q5VYP0 1347 aa24.36■■□□□ 1.49
C6orf48-204ENST00000375639 TTC21BQ7Z4L5 1316 aa24.36■■□□□ 1.49
C6orf48-204ENST00000375639 COL16A1Q07092 1604 aaPredicted RBP24.36■■□□□ 1.49
C6orf48-204ENST00000375639 MON2Q7Z3U7 1717 aa24.36■■□□□ 1.49
C6orf48-204ENST00000375639 EDC4Q6P2E9 1401 aaKnown RBP24.35■■□□□ 1.49
C6orf48-204ENST00000375639 DDX10Q13206 875 aaKnown RBP24.35■■□□□ 1.49
C6orf48-204ENST00000375639 SSH2Q76I76 1423 aa24.35■■□□□ 1.49
C6orf48-204ENST00000375639 ABTB2Q8N961 1025 aa24.34■■□□□ 1.49
C6orf48-204ENST00000375639 TRPM3Q9HCF6 1732 aaPredicted RBP24.34■■□□□ 1.49
C6orf48-204ENST00000375639 TNS3Q68CZ2 1445 aa24.34■■□□□ 1.49
C6orf48-204ENST00000375639 NSD3Q9BZ95 1437 aa24.34■■□□□ 1.49
C6orf48-204ENST00000375639 JCADQ9P266 1359 aa24.33■■□□□ 1.49
C6orf48-204ENST00000375639 TTC21AQ8NDW8 1320 aa24.33■■□□□ 1.48
C6orf48-204ENST00000375639 NUTM2GQ5VZR2 741 aa24.32■■□□□ 1.48
C6orf48-204ENST00000375639 PLEKHG5O94827 1062 aa24.31■■□□□ 1.48
C6orf48-204ENST00000375639 KNSTRNQ9Y448 316 aa24.31■■□□□ 1.48
C6orf48-204ENST00000375639 NRKQ7Z2Y5 1582 aa24.3■■□□□ 1.48
C6orf48-204ENST00000375639 NME9Q86XW9 330 aa24.3■■□□□ 1.48
C6orf48-204ENST00000375639 ARHGEF10O15013 1369 aa24.29■■□□□ 1.48
C6orf48-204ENST00000375639 NLRP6P59044 892 aa24.28■■□□□ 1.48
C6orf48-204ENST00000375639 PNPLA6Q8IY17 1366 aa24.28■■□□□ 1.48
C6orf48-204ENST00000375639 ALS2Q96Q42 1657 aa24.27■■□□□ 1.48
C6orf48-204ENST00000375639 ZRANB1Q9UGI0 708 aa24.27■■□□□ 1.48
C6orf48-204ENST00000375639 CGNL1Q0VF96 1302 aa24.27■■□□□ 1.48
C6orf48-204ENST00000375639 PER1O15534 1290 aaPredicted RBP24.26■■□□□ 1.47
C6orf48-204ENST00000375639 NLRP13Q86W25 1043 aa24.26■■□□□ 1.47
C6orf48-204ENST00000375639 LRP6O75581 1613 aa24.25■■□□□ 1.47
C6orf48-204ENST00000375639 FYB1O15117 783 aa24.25■■□□□ 1.47
C6orf48-204ENST00000375639 GGNBP2Q9H3C7 697 aa24.25■■□□□ 1.47
C6orf48-204ENST00000375639 CABLES1Q8TDN4 633 aa24.24■■□□□ 1.47
C6orf48-204ENST00000375639 PIK3C2AO00443 1686 aa24.24■■□□□ 1.47
C6orf48-204ENST00000375639 ZNF772Q68DY9 489 aaPredicted RBP24.23■■□□□ 1.47
C6orf48-204ENST00000375639 COG3Q96JB2 828 aa24.22■■□□□ 1.47
C6orf48-204ENST00000375639 USP31Q70CQ4 1352 aa24.21■■□□□ 1.47
C6orf48-204ENST00000375639 HAP1P54257 671 aaPredicted RBP24.21■■□□□ 1.47
C6orf48-204ENST00000375639 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
C6orf48-204ENST00000375639 SPATA31A6Q5VVP1 1343 aa24.2■■□□□ 1.46
C6orf48-204ENST00000375639 NUTM2BA6NNL0 878 aaPredicted RBP24.2■■□□□ 1.46
C6orf48-204ENST00000375639 NUTM2EB1AL46 878 aaPredicted RBP24.2■■□□□ 1.46
C6orf48-204ENST00000375639 NUTM2AQ8IVF1 878 aaPredicted RBP24.2■■□□□ 1.46
C6orf48-204ENST00000375639 SHPRHQ149N8 1683 aa24.2■■□□□ 1.46
C6orf48-204ENST00000375639 KIF20BQ96Q89 1820 aa24.19■■□□□ 1.46
C6orf48-204ENST00000375639 AMER1Q5JTC6 1135 aaPredicted RBP24.19■■□□□ 1.46
C6orf48-204ENST00000375639 SOX12O15370 315 aa24.18■■□□□ 1.46
C6orf48-204ENST00000375639 CC2D1BQ5T0F9 858 aaKnown RBP24.18■■□□□ 1.46
C6orf48-204ENST00000375639 COL22A1Q8NFW1 1626 aaPredicted RBP24.17■■□□□ 1.46
C6orf48-204ENST00000375639 USP19O94966 1318 aa24.17■■□□□ 1.46
C6orf48-204ENST00000375639 MEX3CQ5U5Q3 659 aaKnown RBP24.17■■□□□ 1.46
C6orf48-204ENST00000375639 OVOS2A0A0J9YW53 1432 aa24.17■■□□□ 1.46
C6orf48-204ENST00000375639 OVOS2Q6IE36 1432 aa24.17■■□□□ 1.46
C6orf48-204ENST00000375639 NSD2O96028 1365 aa24.16■■□□□ 1.46
C6orf48-204ENST00000375639 GCP02774 474 aa24.15■■□□□ 1.46
C6orf48-204ENST00000375639 CDK12Q9NYV4 1490 aaPredicted RBP24.14■■□□□ 1.46
C6orf48-204ENST00000375639 MORC1Q86VD1 984 aa24.14■■□□□ 1.45
C6orf48-204ENST00000375639 RXRBP28702 533 aa24.13■■□□□ 1.45
C6orf48-204ENST00000375639 KCNH5Q8NCM2 988 aa24.13■■□□□ 1.45
C6orf48-204ENST00000375639 MARF1Q9Y4F3 1742 aaKnown RBP24.13■■□□□ 1.45
C6orf48-204ENST00000375639 ADAMTS2O95450 1211 aa24.12■■□□□ 1.45
C6orf48-204ENST00000375639 NPC1L1Q9UHC9 1359 aa24.12■■□□□ 1.45
C6orf48-204ENST00000375639 USP54Q70EL1 1684 aa24.11■■□□□ 1.45
C6orf48-204ENST00000375639 SLIT3O75094 1523 aa24.11■■□□□ 1.45
C6orf48-204ENST00000375639 TNNT2P45379 298 aaPredicted RBP24.11■■□□□ 1.45
C6orf48-204ENST00000375639 ZC3H6P61129 1189 aaKnown RBP24.11■■□□□ 1.45
C6orf48-204ENST00000375639 PHRF1Q9P1Y6 1649 aaKnown RBP24.1■■□□□ 1.45
C6orf48-204ENST00000375639 CRYBG1Q9Y4K1 1723 aa24.1■■□□□ 1.45
C6orf48-204ENST00000375639 ABCA3Q99758 1704 aa24.1■■□□□ 1.45
C6orf48-204ENST00000375639 ZBTB7CA1YPR0 619 aa24.09■■□□□ 1.45
C6orf48-204ENST00000375639 FBLN1P23142 703 aa24.09■■□□□ 1.45
C6orf48-204ENST00000375639 SRCAPQ6ZRS2 3230 aa24.09■■□□□ 1.45
C6orf48-204ENST00000375639 ANKRD26Q9UPS8 1709 aa24.09■■□□□ 1.45
C6orf48-204ENST00000375639 PRDM11Q9NQV5 511 aa24.06■■□□□ 1.44
C6orf48-204ENST00000375639 KIAA0232Q92628 1395 aa24.05■■□□□ 1.44
C6orf48-204ENST00000375639 NFAT5O94916 1531 aa24.04■■□□□ 1.44
C6orf48-204ENST00000375639 RRS1Q15050 365 aaKnown RBP24.03■■□□□ 1.44
C6orf48-204ENST00000375639 CHRNA2Q15822 529 aa24.03■■□□□ 1.44
C6orf48-204ENST00000375639 ARHGEF25Q86VW2 580 aa24.03■■□□□ 1.44
C6orf48-204ENST00000375639 C8orf37Q96NL8 207 aa24.02■■□□□ 1.44
C6orf48-204ENST00000375639 CPDO75976 1380 aa24.02■■□□□ 1.44
C6orf48-204ENST00000375639 FAM83GA6ND36 823 aa24.01■■□□□ 1.43
C6orf48-204ENST00000375639 MAP3K19Q56UN5 1328 aa24.01■■□□□ 1.43
C6orf48-204ENST00000375639 AATKQ6ZMQ8 1374 aa24.01■■□□□ 1.43
C6orf48-204ENST00000375639 AMPHP49418 695 aa24■■□□□ 1.43
C6orf48-204ENST00000375639 NGLY1Q96IV0 654 aa24■■□□□ 1.43
C6orf48-204ENST00000375639 PPM1GO15355 546 aaPredicted RBP23.99■■□□□ 1.43
C6orf48-204ENST00000375639 RALBP1Q15311 655 aa23.98■■□□□ 1.43
C6orf48-204ENST00000375639 POLKQ9UBT6 870 aa23.98■■□□□ 1.43
C6orf48-204ENST00000375639 EMILIN1Q9Y6C2 1016 aa23.98■■□□□ 1.43
C6orf48-204ENST00000375639 AFF2P51816 1311 aa23.98■■□□□ 1.43
C6orf48-204ENST00000375639 PARD3Q8TEW0 1356 aa23.98■■□□□ 1.43
C6orf48-204ENST00000375639 RGS12O14924 1447 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms