RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 GPATCH8Q9UKJ3 1502 aaKnown RBP23.64■■□□□ 1.37
TGFBR1-201ENST00000374990 PTPRKQ15262 1439 aa23.63■■□□□ 1.37
TGFBR1-201ENST00000374990 PSMA5P28066 241 aa23.63■■□□□ 1.37
TGFBR1-201ENST00000374990 CHD1LQ86WJ1 897 aa23.63■■□□□ 1.37
TGFBR1-201ENST00000374990 RPAP2Q8IXW5 612 aaPredicted RBP23.63■■□□□ 1.37
TGFBR1-201ENST00000374990 BICD2Q8TD16 824 aa23.63■■□□□ 1.37
TGFBR1-201ENST00000374990 ATF3P18847 181 aa23.62■■□□□ 1.37
TGFBR1-201ENST00000374990 HDGFL1Q5TGJ6 251 aa23.62■■□□□ 1.37
TGFBR1-201ENST00000374990 NUTM2GQ5VZR2 741 aa23.62■■□□□ 1.37
TGFBR1-201ENST00000374990 TRIM29Q14134 588 aa23.61■■□□□ 1.37
TGFBR1-201ENST00000374990 C1orf115Q9H7X2 142 aa23.61■■□□□ 1.37
TGFBR1-201ENST00000374990 SCAF11Q99590 1463 aaKnown RBP23.61■■□□□ 1.37
TGFBR1-201ENST00000374990 CIZ1Q9ULV3 898 aaPredicted RBP23.61■■□□□ 1.37
TGFBR1-201ENST00000374990 RARSP54136 660 aaKnown RBP23.61■■□□□ 1.37
TGFBR1-201ENST00000374990 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
TGFBR1-201ENST00000374990 HIP1O00291 1037 aa23.6■■□□□ 1.37
TGFBR1-201ENST00000374990 ERC1Q8IUD2 1116 aa23.6■■□□□ 1.37
TGFBR1-201ENST00000374990 UGGT2Q9NYU1 1516 aa23.6■■□□□ 1.37
TGFBR1-201ENST00000374990 CWC22Q9HCG8 908 aaKnown RBP23.6■■□□□ 1.37
TGFBR1-201ENST00000374990 NKTRP30414 1462 aaKnown RBP23.6■■□□□ 1.37
TGFBR1-201ENST00000374990 PDCP20941 246 aa23.6■■□□□ 1.37
TGFBR1-201ENST00000374990 FAM43AQ8N2R8 423 aa23.6■■□□□ 1.37
TGFBR1-201ENST00000374990 AIMP1Q12904 312 aaKnown RBP23.58■■□□□ 1.37
TGFBR1-201ENST00000374990 NASPP49321 788 aaPredicted RBP23.58■■□□□ 1.37
TGFBR1-201ENST00000374990 TPM3P06753 285 aa23.58■■□□□ 1.37
TGFBR1-201ENST00000374990 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.58■■□□□ 1.36
TGFBR1-201ENST00000374990 ALDH1L2Q3SY69 923 aa23.57■■□□□ 1.36
TGFBR1-201ENST00000374990 DUSP27Q5VZP5 1158 aa23.57■■□□□ 1.36
TGFBR1-201ENST00000374990 SRCIN1Q9C0H9 1055 aa23.57■■□□□ 1.36
TGFBR1-201ENST00000374990 ADGRL1O94910 1474 aa23.57■■□□□ 1.36
TGFBR1-201ENST00000374990 APPP05067 770 aa23.56■■□□□ 1.36
TGFBR1-201ENST00000374990 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
TGFBR1-201ENST00000374990 CCDC73Q6ZRK6 1079 aa23.56■■□□□ 1.36
TGFBR1-201ENST00000374990 LRRCC1Q9C099 1032 aa23.56■■□□□ 1.36
TGFBR1-201ENST00000374990 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
TGFBR1-201ENST00000374990 CD109Q6YHK3 1445 aa23.55■■□□□ 1.36
TGFBR1-201ENST00000374990 FSD1Q9BTV5 496 aa23.55■■□□□ 1.36
TGFBR1-201ENST00000374990 LRPPRCP42704 1394 aaKnown RBP23.55■■□□□ 1.36
TGFBR1-201ENST00000374990 K7ELQ4 463 aaPredicted RBP23.54■■□□□ 1.36
TGFBR1-201ENST00000374990 RALYLQ86SE5 291 aaKnown RBP23.54■■□□□ 1.36
TGFBR1-201ENST00000374990 NUDT16Q96DE0 195 aaKnown RBP23.54■■□□□ 1.36
TGFBR1-201ENST00000374990 SASS6Q6UVJ0 657 aa23.54■■□□□ 1.36
TGFBR1-201ENST00000374990 NEUROD6Q96NK8 337 aa23.54■■□□□ 1.36
TGFBR1-201ENST00000374990 NSD2O96028 1365 aa23.54■■□□□ 1.36
TGFBR1-201ENST00000374990 TMEM57Q8N5G2 664 aa23.54■■□□□ 1.36
TGFBR1-201ENST00000374990 ARID3AQ99856 593 aa23.54■■□□□ 1.36
TGFBR1-201ENST00000374990 SSH1Q8WYL5 1049 aa23.53■■□□□ 1.36
TGFBR1-201ENST00000374990 HOOK1Q9UJC3 728 aaKnown RBP23.53■■□□□ 1.36
TGFBR1-201ENST00000374990 TPM1P09493 284 aa23.52■■□□□ 1.36
TGFBR1-201ENST00000374990 C20orf194Q5TEA3 1177 aa23.52■■□□□ 1.36
TGFBR1-201ENST00000374990 ESCO1Q5FWF5 840 aa23.52■■□□□ 1.36
TGFBR1-201ENST00000374990 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.36
TGFBR1-201ENST00000374990 TPD52L1Q16890 204 aaPredicted RBP23.52■■□□□ 1.36
TGFBR1-201ENST00000374990 RALGAPBQ86X10 1494 aa23.52■■□□□ 1.35
TGFBR1-201ENST00000374990 LETM1O95202 739 aaPredicted RBP23.51■■□□□ 1.35
TGFBR1-201ENST00000374990 TSR1Q2NL82 804 aaKnown RBP23.51■■□□□ 1.35
TGFBR1-201ENST00000374990 C14orf93Q9H972 538 aaKnown RBP23.5■■□□□ 1.35
TGFBR1-201ENST00000374990 IFT57Q9NWB7 429 aa23.5■■□□□ 1.35
TGFBR1-201ENST00000374990 FAM135AQ9P2D6 1515 aa23.5■■□□□ 1.35
TGFBR1-201ENST00000374990 DHX29Q7Z478 1369 aaKnown RBP23.5■■□□□ 1.35
TGFBR1-201ENST00000374990 RRS1Q15050 365 aaKnown RBP23.5■■□□□ 1.35
TGFBR1-201ENST00000374990 G3V3G9 751 aa23.49■■□□□ 1.35
TGFBR1-201ENST00000374990 DCAF8Q5TAQ9 597 aa23.49■■□□□ 1.35
TGFBR1-201ENST00000374990 CAVIN1Q6NZI2 390 aaKnown RBP23.49■■□□□ 1.35
TGFBR1-201ENST00000374990 ZNF530Q6P9A1 599 aaPredicted RBP23.49■■□□□ 1.35
TGFBR1-201ENST00000374990 MCM4P33991 863 aa23.48■■□□□ 1.35
TGFBR1-201ENST00000374990 CREBRFQ8IUR6 639 aa23.48■■□□□ 1.35
TGFBR1-201ENST00000374990 SLC26A8Q96RN1 970 aa23.48■■□□□ 1.35
TGFBR1-201ENST00000374990 SAFBQ15424 915 aaKnown RBP eCLIP23.48■■□□□ 1.35
TGFBR1-201ENST00000374990 MARCH6O60337 910 aa23.48■■□□□ 1.35
TGFBR1-201ENST00000374990 IDI1Q13907 227 aa23.48■■□□□ 1.35
TGFBR1-201ENST00000374990 NUP160Q12769 1436 aa23.48■■□□□ 1.35
TGFBR1-201ENST00000374990 AMOTL1Q8IY63 956 aa23.48■■□□□ 1.35
TGFBR1-201ENST00000374990 TCOF1Q13428 1488 aaKnown RBP23.47■■□□□ 1.35
TGFBR1-201ENST00000374990 DISP3Q9P2K9 1392 aa23.47■■□□□ 1.35
TGFBR1-201ENST00000374990 CCDC39Q9UFE4 941 aa23.46■■□□□ 1.35
TGFBR1-201ENST00000374990 TATP17735 454 aaPredicted RBP23.46■■□□□ 1.35
TGFBR1-201ENST00000374990 WASHC4Q2M389 1173 aa23.46■■□□□ 1.35
TGFBR1-201ENST00000374990 ERICH2A1L162 156 aa23.46■■□□□ 1.35
TGFBR1-201ENST00000374990 PRPF40AO75400 957 aaKnown RBP23.46■■□□□ 1.35
TGFBR1-201ENST00000374990 PROSER2Q86WR7 435 aaPredicted RBP23.46■■□□□ 1.35
TGFBR1-201ENST00000374990 NUP153P49790 1475 aaKnown RBP23.45■■□□□ 1.34
TGFBR1-201ENST00000374990 NOL10Q9BSC4 688 aaKnown RBP23.45■■□□□ 1.34
TGFBR1-201ENST00000374990 NFXL1Q6ZNB6 911 aa23.45■■□□□ 1.34
TGFBR1-201ENST00000374990 GOLGA6L1Q8N7Z2 621 aa23.45■■□□□ 1.34
TGFBR1-201ENST00000374990 ANKRD20A12PQ8NF67 263 aa23.44■■□□□ 1.34
TGFBR1-201ENST00000374990 WDR33Q9C0J8 1336 aaKnown RBP23.44■■□□□ 1.34
TGFBR1-201ENST00000374990 SYTL4Q96C24 671 aaPredicted RBP23.44■■□□□ 1.34
TGFBR1-201ENST00000374990 CLSTN1O94985 981 aa23.44■■□□□ 1.34
TGFBR1-201ENST00000374990 VPS37DQ86XT2 251 aa23.44■■□□□ 1.34
TGFBR1-201ENST00000374990 ATP10BO94823 1461 aa23.43■■□□□ 1.34
TGFBR1-201ENST00000374990 POGZQ7Z3K3 1410 aa23.43■■□□□ 1.34
TGFBR1-201ENST00000374990 CYP46A1Q9Y6A2 500 aa23.43■■□□□ 1.34
TGFBR1-201ENST00000374990 ANKRD1Q15327 319 aa23.42■■□□□ 1.34
TGFBR1-201ENST00000374990 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
TGFBR1-201ENST00000374990 PDIA4P13667 645 aaKnown RBP23.42■■□□□ 1.34
TGFBR1-201ENST00000374990 RAPGEF6Q8TEU7 1601 aa23.42■■□□□ 1.34
TGFBR1-201ENST00000374990 CCDC173Q0VFZ6 552 aa23.42■■□□□ 1.34
TGFBR1-201ENST00000374990 RNF214Q8ND24 703 aa23.42■■□□□ 1.34
TGFBR1-201ENST00000374990 PES1O00541 588 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms