RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 NME9Q86XW9 330 aa21.82■■□□□ 1.08
RXRB-201ENST00000374680 PIK3C2BO00750 1634 aa21.81■■□□□ 1.08
RXRB-201ENST00000374680 CFAP74Q9C0B2 1584 aa21.81■■□□□ 1.08
RXRB-201ENST00000374680 SHPRHQ149N8 1683 aa21.81■■□□□ 1.08
RXRB-201ENST00000374680 TRIM27P14373 513 aa21.8■■□□□ 1.08
RXRB-201ENST00000374680 PHACTR3Q96KR7 559 aa21.8■■□□□ 1.08
RXRB-201ENST00000374680 ABCC11Q96J66 1382 aa21.8■■□□□ 1.08
RXRB-201ENST00000374680 RRS1Q15050 365 aaKnown RBP21.8■■□□□ 1.08
RXRB-201ENST00000374680 SPRYD3Q8NCJ5 442 aa21.8■■□□□ 1.08
RXRB-201ENST00000374680 MYO5BQ9ULV0 1848 aa21.8■■□□□ 1.08
RXRB-201ENST00000374680 CCDC27Q2M243 656 aa21.79■■□□□ 1.08
RXRB-201ENST00000374680 TSPOAP1O95153 1857 aa21.79■■□□□ 1.08
RXRB-201ENST00000374680 MVPQ14764 893 aaKnown RBP21.79■■□□□ 1.08
RXRB-201ENST00000374680 NFKBIBQ15653 356 aa21.79■■□□□ 1.08
RXRB-201ENST00000374680 PMFBP1Q8TBY8 1022 aa21.79■■□□□ 1.08
RXRB-201ENST00000374680 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
RXRB-201ENST00000374680 ATAD2Q6PL18 1390 aa21.78■■□□□ 1.08
RXRB-201ENST00000374680 SLKQ9H2G2 1235 aaPredicted RBP21.78■■□□□ 1.08
RXRB-201ENST00000374680 ARHGEF28Q8N1W1 1705 aaKnown RBP21.77■■□□□ 1.08
RXRB-201ENST00000374680 PUS7Q96PZ0 661 aaKnown RBP21.77■■□□□ 1.08
RXRB-201ENST00000374680 RWDD1Q9H446 243 aaPredicted RBP21.77■■□□□ 1.08
RXRB-201ENST00000374680 IQSEC2Q5JU85 1478 aa21.76■■□□□ 1.07
RXRB-201ENST00000374680 TMEM57Q8N5G2 664 aa21.76■■□□□ 1.07
RXRB-201ENST00000374680 NSD2O96028 1365 aa21.75■■□□□ 1.07
RXRB-201ENST00000374680 PTPRMP28827 1452 aa21.75■■□□□ 1.07
RXRB-201ENST00000374680 ARHGAP31Q2M1Z3 1444 aa21.75■■□□□ 1.07
RXRB-201ENST00000374680 ZC3H13Q5T200 1668 aaKnown RBP21.75■■□□□ 1.07
RXRB-201ENST00000374680 DCTN1Q14203 1278 aa21.74■■□□□ 1.07
RXRB-201ENST00000374680 FRAT2O75474 233 aaPredicted RBP21.73■■□□□ 1.07
RXRB-201ENST00000374680 USP19O94966 1318 aa21.73■■□□□ 1.07
RXRB-201ENST00000374680 C1orf115Q9H7X2 142 aa21.73■■□□□ 1.07
RXRB-201ENST00000374680 ATF7IPQ6VMQ6 1270 aa21.72■■□□□ 1.07
RXRB-201ENST00000374680 FAM83GA6ND36 823 aa21.72■■□□□ 1.07
RXRB-201ENST00000374680 TSPYL6Q8N831 410 aa21.71■■□□□ 1.07
RXRB-201ENST00000374680 RTN4Q9NQC3 1192 aaKnown RBP21.71■■□□□ 1.07
RXRB-201ENST00000374680 CD163L1Q9NR16 1453 aa21.71■■□□□ 1.07
RXRB-201ENST00000374680 NUDT16Q96DE0 195 aaKnown RBP21.69■■□□□ 1.06
RXRB-201ENST00000374680 RICTORQ6R327 1708 aa21.69■■□□□ 1.06
RXRB-201ENST00000374680 WASLO00401 505 aaPredicted RBP21.68■■□□□ 1.06
RXRB-201ENST00000374680 MFAP1P55081 439 aaKnown RBP21.68■■□□□ 1.06
RXRB-201ENST00000374680 METP08581 1390 aa21.68■■□□□ 1.06
RXRB-201ENST00000374680 CEBPAP49715 358 aaPredicted RBP21.68■■□□□ 1.06
RXRB-201ENST00000374680 RSPH6AQ9H0K4 717 aa21.68■■□□□ 1.06
RXRB-201ENST00000374680 RIMS2Q9UQ26 1411 aa21.68■■□□□ 1.06
RXRB-201ENST00000374680 TMEM131LA2VDJ0 1609 aa21.67■■□□□ 1.06
RXRB-201ENST00000374680 ZFYVE9O95405 1425 aa21.67■■□□□ 1.06
RXRB-201ENST00000374680 NINLQ9Y2I6 1382 aa21.67■■□□□ 1.06
RXRB-201ENST00000374680 ALKQ9UM73 1620 aa21.67■■□□□ 1.06
RXRB-201ENST00000374680 FCHSD2O94868 740 aa21.66■■□□□ 1.06
RXRB-201ENST00000374680 LNPKQ9C0E8 428 aa21.66■■□□□ 1.06
RXRB-201ENST00000374680 SLC26A8Q96RN1 970 aa21.66■■□□□ 1.06
RXRB-201ENST00000374680 PREX1Q8TCU6 1659 aa21.65■■□□□ 1.06
RXRB-201ENST00000374680 COG3Q96JB2 828 aa21.64■■□□□ 1.06
RXRB-201ENST00000374680 UPF2Q9HAU5 1272 aaKnown RBP21.64■■□□□ 1.06
RXRB-201ENST00000374680 DDX19BQ9UMR2 479 aa21.64■■□□□ 1.06
RXRB-201ENST00000374680 IL27Q8NEV9 243 aa21.63■■□□□ 1.05
RXRB-201ENST00000374680 AEBP1Q8IUX7 1158 aa21.62■■□□□ 1.05
RXRB-201ENST00000374680 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
RXRB-201ENST00000374680 ARHGEF40Q8TER5 1519 aa21.61■■□□□ 1.05
RXRB-201ENST00000374680 KRT24Q2M2I5 525 aa21.61■■□□□ 1.05
RXRB-201ENST00000374680 USP35Q9P2H5 1018 aa21.61■■□□□ 1.05
RXRB-201ENST00000374680 PPIP5K1Q6PFW1 1433 aa21.61■■□□□ 1.05
RXRB-201ENST00000374680 NLRP1Q9C000 1473 aa21.61■■□□□ 1.05
RXRB-201ENST00000374680 NFE2L2Q16236 605 aa21.61■■□□□ 1.05
RXRB-201ENST00000374680 CCDC61Q9Y6R9 512 aa21.6■■□□□ 1.05
RXRB-201ENST00000374680 A2ML1A8K2U0 1454 aa21.6■■□□□ 1.05
RXRB-201ENST00000374680 IPO8O15397 1037 aaKnown RBP21.6■■□□□ 1.05
RXRB-201ENST00000374680 ARXQ96QS3 562 aa21.6■■□□□ 1.05
RXRB-201ENST00000374680 MBIPQ9NS73 344 aa21.59■■□□□ 1.05
RXRB-201ENST00000374680 COL3A1P02461 1466 aaPredicted RBP21.59■■□□□ 1.05
RXRB-201ENST00000374680 IL13P35225 146 aa21.59■■□□□ 1.05
RXRB-201ENST00000374680 C8orf58Q8NAV2 365 aa21.59■■□□□ 1.05
RXRB-201ENST00000374680 ZMYM3Q14202 1370 aa21.58■■□□□ 1.05
RXRB-201ENST00000374680 ZBTB40Q9NUA8 1239 aa21.58■■□□□ 1.04
RXRB-201ENST00000374680 VAMP4O75379 141 aa21.57■■□□□ 1.04
RXRB-201ENST00000374680 PLEKHG5O94827 1062 aa21.57■■□□□ 1.04
RXRB-201ENST00000374680 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
RXRB-201ENST00000374680 ANKRD45Q5TZF3 282 aa21.57■■□□□ 1.04
RXRB-201ENST00000374680 MIS18AQ9NYP9 233 aa21.56■■□□□ 1.04
RXRB-201ENST00000374680 USP32Q8NFA0 1604 aa21.56■■□□□ 1.04
RXRB-201ENST00000374680 PRR36Q9H6K5 1346 aa21.56■■□□□ 1.04
RXRB-201ENST00000374680 CT47B1P0C2W7 299 aaPredicted RBP21.56■■□□□ 1.04
RXRB-201ENST00000374680 BECN1Q14457 450 aa21.56■■□□□ 1.04
RXRB-201ENST00000374680 GSE1Q14687 1217 aa21.56■■□□□ 1.04
RXRB-201ENST00000374680 PNPLA6Q8IY17 1366 aa21.56■■□□□ 1.04
RXRB-201ENST00000374680 TWISTNBQ3B726 338 aaPredicted RBP21.55■■□□□ 1.04
RXRB-201ENST00000374680 MCM10Q7L590 875 aa21.55■■□□□ 1.04
RXRB-201ENST00000374680 KIF16BQ96L93 1317 aa21.54■■□□□ 1.04
RXRB-201ENST00000374680 APBB1O00213 710 aa21.54■■□□□ 1.04
RXRB-201ENST00000374680 TBC1D2Q9BYX2 928 aa21.54■■□□□ 1.04
RXRB-201ENST00000374680 CLTCQ00610 1675 aaKnown RBP21.54■■□□□ 1.04
RXRB-201ENST00000374680 IL16Q14005 1332 aa21.53■■□□□ 1.04
RXRB-201ENST00000374680 HSP90AB2PQ58FF8 381 aa21.53■■□□□ 1.04
RXRB-201ENST00000374680 TBC1D32Q96NH3 1257 aa21.53■■□□□ 1.04
RXRB-201ENST00000374680 NUTM2GQ5VZR2 741 aa21.53■■□□□ 1.04
RXRB-201ENST00000374680 LTKP29376 864 aa21.52■■□□□ 1.04
RXRB-201ENST00000374680 AAMPQ13685 434 aa21.52■■□□□ 1.04
RXRB-201ENST00000374680 BRPF3Q9ULD4 1205 aa21.52■■□□□ 1.04
RXRB-201ENST00000374680 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.52■■□□□ 1.03
RXRB-201ENST00000374680 C22orf23Q9BZE7 217 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms