RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 NUTM2FA1L443 756 aa24.23■■□□□ 1.47
PFDN6-201ENST00000374606 SRPK2P78362 688 aaKnown RBP24.23■■□□□ 1.47
PFDN6-201ENST00000374606 KIF1AQ12756 1690 aa24.23■■□□□ 1.47
PFDN6-201ENST00000374606 WASLO00401 505 aaPredicted RBP24.22■■□□□ 1.47
PFDN6-201ENST00000374606 USP32Q8NFA0 1604 aa24.21■■□□□ 1.47
PFDN6-201ENST00000374606 SPATA31A3Q5VYP0 1347 aa24.21■■□□□ 1.47
PFDN6-201ENST00000374606 PUS7Q96PZ0 661 aaKnown RBP24.21■■□□□ 1.47
PFDN6-201ENST00000374606 CDK19Q9BWU1 502 aa24.21■■□□□ 1.47
PFDN6-201ENST00000374606 FMN2Q9NZ56 1722 aa24.21■■□□□ 1.47
PFDN6-201ENST00000374606 DDX10Q13206 875 aaKnown RBP24.2■■□□□ 1.46
PFDN6-201ENST00000374606 CABP2Q9NPB3 220 aa24.2■■□□□ 1.46
PFDN6-201ENST00000374606 BRWD3Q6RI45 1802 aa24.19■■□□□ 1.46
PFDN6-201ENST00000374606 SF3B2Q13435 895 aaKnown RBP24.17■■□□□ 1.46
PFDN6-201ENST00000374606 ITSN1Q15811 1721 aa24.16■■□□□ 1.46
PFDN6-201ENST00000374606 TOPAZ1Q8N9V7 1692 aa24.16■■□□□ 1.46
PFDN6-201ENST00000374606 ATP7BP35670 1465 aa24.16■■□□□ 1.46
PFDN6-201ENST00000374606 HAP1P54257 671 aaPredicted RBP24.15■■□□□ 1.46
PFDN6-201ENST00000374606 KRT28Q7Z3Y7 464 aa24.15■■□□□ 1.46
PFDN6-201ENST00000374606 DEFB132Q7Z7B7 95 aa24.15■■□□□ 1.46
PFDN6-201ENST00000374606 NINLQ9Y2I6 1382 aa24.15■■□□□ 1.46
PFDN6-201ENST00000374606 TNS3Q68CZ2 1445 aa24.14■■□□□ 1.45
PFDN6-201ENST00000374606 SEPT12Q8IYM1 358 aa24.14■■□□□ 1.45
PFDN6-201ENST00000374606 VPS72Q15906 364 aa24.13■■□□□ 1.45
PFDN6-201ENST00000374606 ANKARQ7Z5J8 1434 aa24.12■■□□□ 1.45
PFDN6-201ENST00000374606 NWD2Q9ULI1 1742 aa24.12■■□□□ 1.45
PFDN6-201ENST00000374606 PLCH1Q4KWH8 1693 aa24.11■■□□□ 1.45
PFDN6-201ENST00000374606 TMC1Q8TDI8 760 aa24.11■■□□□ 1.45
PFDN6-201ENST00000374606 LRP5O75197 1615 aa24.1■■□□□ 1.45
PFDN6-201ENST00000374606 PSME1Q06323 249 aa24.1■■□□□ 1.45
PFDN6-201ENST00000374606 DIEXFQ68CQ4 756 aaKnown RBP24.1■■□□□ 1.45
PFDN6-201ENST00000374606 PPIP5K1Q6PFW1 1433 aa24.1■■□□□ 1.45
PFDN6-201ENST00000374606 NUDT16Q96DE0 195 aaKnown RBP24.09■■□□□ 1.45
PFDN6-201ENST00000374606 CCDC9Q9Y3X0 531 aaKnown RBP24.09■■□□□ 1.45
PFDN6-201ENST00000374606 PRR36Q9H6K5 1346 aa24.09■■□□□ 1.45
PFDN6-201ENST00000374606 PHF8Q9UPP1 1060 aa24.08■■□□□ 1.45
PFDN6-201ENST00000374606 RGPD8O14715 1765 aaPredicted RBP24.08■■□□□ 1.44
PFDN6-201ENST00000374606 ABCA3Q99758 1704 aa24.07■■□□□ 1.44
PFDN6-201ENST00000374606 KRT27Q7Z3Y8 459 aa24.07■■□□□ 1.44
PFDN6-201ENST00000374606 SBNO1A3KN83 1393 aa24.06■■□□□ 1.44
PFDN6-201ENST00000374606 ONECUT3O60422 494 aaPredicted RBP24.06■■□□□ 1.44
PFDN6-201ENST00000374606 CABLES1Q8TDN4 633 aa24.06■■□□□ 1.44
PFDN6-201ENST00000374606 SLC12A5Q9H2X9 1139 aa24.06■■□□□ 1.44
PFDN6-201ENST00000374606 CCDC61Q9Y6R9 512 aa24.06■■□□□ 1.44
PFDN6-201ENST00000374606 ARHGEF10O15013 1369 aa24.05■■□□□ 1.44
PFDN6-201ENST00000374606 ANKRD36BQ8N2N9 1353 aa24.04■■□□□ 1.44
PFDN6-201ENST00000374606 PLEKHG5O94827 1062 aa24.04■■□□□ 1.44
PFDN6-201ENST00000374606 PANK3Q9H999 370 aa24.04■■□□□ 1.44
PFDN6-201ENST00000374606 LMOD2Q6P5Q4 547 aa24.03■■□□□ 1.44
PFDN6-201ENST00000374606 CABP1Q9NZU7 370 aa24.03■■□□□ 1.44
PFDN6-201ENST00000374606 AKAP12Q02952 1782 aa24.02■■□□□ 1.44
PFDN6-201ENST00000374606 BAG6P46379 1132 aa24.02■■□□□ 1.44
PFDN6-201ENST00000374606 CD163L1Q9NR16 1453 aa24.01■■□□□ 1.43
PFDN6-201ENST00000374606 A0A0G2JS52 829 aa24.01■■□□□ 1.43
PFDN6-201ENST00000374606 MYT1Q01538 1121 aa24.01■■□□□ 1.43
PFDN6-201ENST00000374606 TERF2IPQ9NYB0 399 aa24.01■■□□□ 1.43
PFDN6-201ENST00000374606 A0A1W2PP64 1363 aa24.01■■□□□ 1.43
PFDN6-201ENST00000374606 MON2Q7Z3U7 1717 aa24.01■■□□□ 1.43
PFDN6-201ENST00000374606 HDGFL2Q7Z4V5 671 aaPredicted RBP23.99■■□□□ 1.43
PFDN6-201ENST00000374606 NRAPQ86VF7 1730 aa23.98■■□□□ 1.43
PFDN6-201ENST00000374606 NSD3Q9BZ95 1437 aa23.98■■□□□ 1.43
PFDN6-201ENST00000374606 PSDA5PKW4 1024 aaPredicted RBP23.97■■□□□ 1.43
PFDN6-201ENST00000374606 FAM83GA6ND36 823 aa23.97■■□□□ 1.43
PFDN6-201ENST00000374606 CPSF1Q10570 1443 aaKnown RBP23.96■■□□□ 1.43
PFDN6-201ENST00000374606 PLEKHG3A1L390 1219 aa23.96■■□□□ 1.43
PFDN6-201ENST00000374606 FAM98CQ17RN3 349 aaKnown RBP23.95■■□□□ 1.42
PFDN6-201ENST00000374606 KNSTRNQ9Y448 316 aa23.95■■□□□ 1.42
PFDN6-201ENST00000374606 KTN1Q86UP2 1357 aaKnown RBP23.94■■□□□ 1.42
PFDN6-201ENST00000374606 PER1O15534 1290 aaPredicted RBP23.94■■□□□ 1.42
PFDN6-201ENST00000374606 NRKQ7Z2Y5 1582 aa23.94■■□□□ 1.42
PFDN6-201ENST00000374606 RGPD1P0DJD0 1748 aa23.93■■□□□ 1.42
PFDN6-201ENST00000374606 POLR3AO14802 1390 aaPredicted RBP23.93■■□□□ 1.42
PFDN6-201ENST00000374606 PMFBP1Q8TBY8 1022 aa23.93■■□□□ 1.42
PFDN6-201ENST00000374606 COL14A1Q05707 1796 aaKnown RBP23.93■■□□□ 1.42
PFDN6-201ENST00000374606 TRPM3Q9HCF6 1732 aaPredicted RBP23.93■■□□□ 1.42
PFDN6-201ENST00000374606 ACEP12821 1306 aa23.92■■□□□ 1.42
PFDN6-201ENST00000374606 CARD14Q9BXL6 1004 aa23.92■■□□□ 1.42
PFDN6-201ENST00000374606 BTG4Q9NY30 223 aa23.92■■□□□ 1.42
PFDN6-201ENST00000374606 EDC4Q6P2E9 1401 aaKnown RBP23.92■■□□□ 1.42
PFDN6-201ENST00000374606 KIF20BQ96Q89 1820 aa23.91■■□□□ 1.42
PFDN6-201ENST00000374606 USP6P35125 1406 aa23.91■■□□□ 1.42
PFDN6-201ENST00000374606 ANP32CO43423 234 aa23.9■■□□□ 1.42
PFDN6-201ENST00000374606 NGDNQ8NEJ9 315 aaKnown RBP23.9■■□□□ 1.42
PFDN6-201ENST00000374606 ZNF692Q9BU19 519 aaPredicted RBP23.9■■□□□ 1.42
PFDN6-201ENST00000374606 ALS2Q96Q42 1657 aa23.89■■□□□ 1.42
PFDN6-201ENST00000374606 EN1Q05925 392 aaPredicted RBP23.88■■□□□ 1.41
PFDN6-201ENST00000374606 CGNL1Q0VF96 1302 aa23.87■■□□□ 1.41
PFDN6-201ENST00000374606 NPC1L1Q9UHC9 1359 aa23.87■■□□□ 1.41
PFDN6-201ENST00000374606 SPATA31A5Q5VU36 1347 aa23.86■■□□□ 1.41
PFDN6-201ENST00000374606 SPATA31A7Q8IWB4 1347 aa23.86■■□□□ 1.41
PFDN6-201ENST00000374606 DISP2A7MBM2 1401 aa23.86■■□□□ 1.41
PFDN6-201ENST00000374606 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
PFDN6-201ENST00000374606 ANKRD26Q9UPS8 1709 aa23.86■■□□□ 1.41
PFDN6-201ENST00000374606 THSD7AQ9UPZ6 1657 aa23.86■■□□□ 1.41
PFDN6-201ENST00000374606 NSD2O96028 1365 aa23.85■■□□□ 1.41
PFDN6-201ENST00000374606 CNGB1Q14028 1251 aaPredicted RBP23.84■■□□□ 1.41
PFDN6-201ENST00000374606 TNS1Q9HBL0 1735 aaKnown RBP23.84■■□□□ 1.41
PFDN6-201ENST00000374606 R3HDM1Q15032 1099 aaKnown RBP23.83■■□□□ 1.41
PFDN6-201ENST00000374606 CC2D1BQ5T0F9 858 aaKnown RBP23.83■■□□□ 1.41
PFDN6-201ENST00000374606 FAM182BQ5T319 152 aa23.83■■□□□ 1.41
PFDN6-201ENST00000374606 CRYBG1Q9Y4K1 1723 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms