RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 BCL11BQ9C0K0 894 aaPredicted RBP17■□□□□ 0.31
A1CF-203ENST00000373995 SALL2Q9Y467 1007 aaPredicted RBP17■□□□□ 0.31
A1CF-203ENST00000373995 ACEP12821 1306 aa17■□□□□ 0.31
A1CF-203ENST00000373995 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
A1CF-203ENST00000373995 ANKRD36BQ8N2N9 1353 aa16.99■□□□□ 0.31
A1CF-203ENST00000373995 FOXO3O43524 673 aa16.98■□□□□ 0.31
A1CF-203ENST00000373995 FBXO3Q9UK99 471 aa16.98■□□□□ 0.31
A1CF-203ENST00000373995 A0A1W2PP64 1363 aa16.98■□□□□ 0.31
A1CF-203ENST00000373995 NHSL1Q5SYE7 1610 aa16.98■□□□□ 0.31
A1CF-203ENST00000373995 PIP4K2BP78356 416 aa16.98■□□□□ 0.31
A1CF-203ENST00000373995 AHDC1Q5TGY3 1603 aaPredicted RBP16.97■□□□□ 0.31
A1CF-203ENST00000373995 NGDNQ8NEJ9 315 aaKnown RBP16.97■□□□□ 0.31
A1CF-203ENST00000373995 NPHP3Q7Z494 1330 aa16.97■□□□□ 0.31
A1CF-203ENST00000373995 AKAP12Q02952 1782 aa16.97■□□□□ 0.31
A1CF-203ENST00000373995 CHMP4AQ9BY43 222 aa16.96■□□□□ 0.31
A1CF-203ENST00000373995 TERF2IPQ9NYB0 399 aa16.96■□□□□ 0.31
A1CF-203ENST00000373995 USP6P35125 1406 aa16.96■□□□□ 0.31
A1CF-203ENST00000373995 SSH2Q76I76 1423 aa16.96■□□□□ 0.31
A1CF-203ENST00000373995 PXDNQ92626 1479 aa16.96■□□□□ 0.31
A1CF-203ENST00000373995 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.3
A1CF-203ENST00000373995 SOS2Q07890 1332 aaPredicted RBP16.95■□□□□ 0.3
A1CF-203ENST00000373995 MON2Q7Z3U7 1717 aa16.95■□□□□ 0.3
A1CF-203ENST00000373995 DDX17Q92841 729 aaKnown RBP16.95■□□□□ 0.3
A1CF-203ENST00000373995 BRD2P25440 801 aaKnown RBP16.94■□□□□ 0.3
A1CF-203ENST00000373995 HDGFL2Q7Z4V5 671 aaPredicted RBP16.94■□□□□ 0.3
A1CF-203ENST00000373995 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
A1CF-203ENST00000373995 BRD4O60885 1362 aaPredicted RBP16.93■□□□□ 0.3
A1CF-203ENST00000373995 KTN1Q86UP2 1357 aaKnown RBP16.93■□□□□ 0.3
A1CF-203ENST00000373995 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
A1CF-203ENST00000373995 PANK3Q9H999 370 aa16.93■□□□□ 0.3
A1CF-203ENST00000373995 PSME1Q06323 249 aa16.93■□□□□ 0.3
A1CF-203ENST00000373995 TPRNQ4KMQ1 711 aa16.92■□□□□ 0.3
A1CF-203ENST00000373995 TRPM3Q9HCF6 1732 aaPredicted RBP16.92■□□□□ 0.3
A1CF-203ENST00000373995 EDC4Q6P2E9 1401 aaKnown RBP16.92■□□□□ 0.3
A1CF-203ENST00000373995 XPCQ01831 940 aaPredicted RBP16.92■□□□□ 0.3
A1CF-203ENST00000373995 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
A1CF-203ENST00000373995 COL16A1Q07092 1604 aaPredicted RBP16.91■□□□□ 0.3
A1CF-203ENST00000373995 SBNO1A3KN83 1393 aa16.9■□□□□ 0.3
A1CF-203ENST00000373995 PER1O15534 1290 aaPredicted RBP16.9■□□□□ 0.3
A1CF-203ENST00000373995 FBXO41Q8TF61 875 aa16.9■□□□□ 0.3
A1CF-203ENST00000373995 NSD3Q9BZ95 1437 aa16.89■□□□□ 0.29
A1CF-203ENST00000373995 TTC21BQ7Z4L5 1316 aa16.88■□□□□ 0.29
A1CF-203ENST00000373995 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
A1CF-203ENST00000373995 DDX10Q13206 875 aaKnown RBP16.88■□□□□ 0.29
A1CF-203ENST00000373995 SPATA31A3Q5VYP0 1347 aa16.87■□□□□ 0.29
A1CF-203ENST00000373995 ALS2Q96Q42 1657 aa16.87■□□□□ 0.29
A1CF-203ENST00000373995 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
A1CF-203ENST00000373995 TTC21AQ8NDW8 1320 aa16.87■□□□□ 0.29
A1CF-203ENST00000373995 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
A1CF-203ENST00000373995 HSPA1LP34931 641 aa16.85■□□□□ 0.29
A1CF-203ENST00000373995 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
A1CF-203ENST00000373995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.84■□□□□ 0.29
A1CF-203ENST00000373995 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
A1CF-203ENST00000373995 FYB1O15117 783 aa16.83■□□□□ 0.28
A1CF-203ENST00000373995 KNSTRNQ9Y448 316 aa16.83■□□□□ 0.28
A1CF-203ENST00000373995 CGNL1Q0VF96 1302 aa16.83■□□□□ 0.28
A1CF-203ENST00000373995 ARHGEF10O15013 1369 aa16.83■□□□□ 0.28
A1CF-203ENST00000373995 NME9Q86XW9 330 aa16.82■□□□□ 0.28
A1CF-203ENST00000373995 USP31Q70CQ4 1352 aa16.82■□□□□ 0.28
A1CF-203ENST00000373995 SAMD1Q6SPF0 538 aaPredicted RBP16.82■□□□□ 0.28
A1CF-203ENST00000373995 ABTB2Q8N961 1025 aa16.82■□□□□ 0.28
A1CF-203ENST00000373995 CCDC136Q96JN2 1154 aa16.82■□□□□ 0.28
A1CF-203ENST00000373995 NPC1L1Q9UHC9 1359 aa16.82■□□□□ 0.28
A1CF-203ENST00000373995 USP54Q70EL1 1684 aa16.82■□□□□ 0.28
A1CF-203ENST00000373995 AAMPQ13685 434 aa16.81■□□□□ 0.28
A1CF-203ENST00000373995 OVOS2A0A0J9YW53 1432 aa16.81■□□□□ 0.28
A1CF-203ENST00000373995 OVOS2Q6IE36 1432 aa16.81■□□□□ 0.28
A1CF-203ENST00000373995 PNPLA6Q8IY17 1366 aa16.81■□□□□ 0.28
A1CF-203ENST00000373995 MED1Q15648 1581 aaPredicted RBP16.81■□□□□ 0.28
A1CF-203ENST00000373995 MARF1Q9Y4F3 1742 aaKnown RBP16.8■□□□□ 0.28
A1CF-203ENST00000373995 COL22A1Q8NFW1 1626 aaPredicted RBP16.8■□□□□ 0.28
A1CF-203ENST00000373995 NSD2O96028 1365 aa16.8■□□□□ 0.28
A1CF-203ENST00000373995 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
A1CF-203ENST00000373995 USP19O94966 1318 aa16.79■□□□□ 0.28
A1CF-203ENST00000373995 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
A1CF-203ENST00000373995 JCADQ9P266 1359 aa16.79■□□□□ 0.28
A1CF-203ENST00000373995 SHPRHQ149N8 1683 aa16.78■□□□□ 0.28
A1CF-203ENST00000373995 CRYBG1Q9Y4K1 1723 aa16.78■□□□□ 0.28
A1CF-203ENST00000373995 NLRP6P59044 892 aa16.78■□□□□ 0.28
A1CF-203ENST00000373995 LMOD2Q6P5Q4 547 aa16.78■□□□□ 0.28
A1CF-203ENST00000373995 NLRP13Q86W25 1043 aa16.78■□□□□ 0.28
A1CF-203ENST00000373995 DHX37Q8IY37 1157 aaKnown RBP16.78■□□□□ 0.28
A1CF-203ENST00000373995 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
A1CF-203ENST00000373995 NUTM2GQ5VZR2 741 aa16.77■□□□□ 0.28
A1CF-203ENST00000373995 SLIT3O75094 1523 aa16.77■□□□□ 0.27
A1CF-203ENST00000373995 HAP1P54257 671 aaPredicted RBP16.77■□□□□ 0.27
A1CF-203ENST00000373995 ANKRD26Q9UPS8 1709 aa16.76■□□□□ 0.27
A1CF-203ENST00000373995 COG3Q96JB2 828 aa16.75■□□□□ 0.27
A1CF-203ENST00000373995 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
A1CF-203ENST00000373995 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
A1CF-203ENST00000373995 ABCA3Q99758 1704 aa16.74■□□□□ 0.27
A1CF-203ENST00000373995 CC2D1BQ5T0F9 858 aaKnown RBP16.73■□□□□ 0.27
A1CF-203ENST00000373995 CABLES1Q8TDN4 633 aa16.73■□□□□ 0.27
A1CF-203ENST00000373995 NFAT5O94916 1531 aa16.73■□□□□ 0.27
A1CF-203ENST00000373995 GCP02774 474 aa16.72■□□□□ 0.27
A1CF-203ENST00000373995 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
A1CF-203ENST00000373995 SPATA31A6Q5VVP1 1343 aa16.72■□□□□ 0.27
A1CF-203ENST00000373995 PARD3Q8TEW0 1356 aa16.71■□□□□ 0.27
A1CF-203ENST00000373995 KCNH5Q8NCM2 988 aa16.7■□□□□ 0.26
A1CF-203ENST00000373995 AATKQ6ZMQ8 1374 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms