RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 NGEFQ8N5V2 710 aa20.8■□□□□ 0.92
HDAC8-209ENST00000373589 CDCA7LQ96GN5 454 aa20.8■□□□□ 0.92
HDAC8-209ENST00000373589 ANKARQ7Z5J8 1434 aa20.8■□□□□ 0.92
HDAC8-209ENST00000373589 RNF123Q5XPI4 1314 aa20.8■□□□□ 0.92
HDAC8-209ENST00000373589 APAF1O14727 1248 aa20.79■□□□□ 0.92
HDAC8-209ENST00000373589 USP6P35125 1406 aa20.79■□□□□ 0.92
HDAC8-209ENST00000373589 SSH2Q76I76 1423 aa20.78■□□□□ 0.92
HDAC8-209ENST00000373589 TTC21BQ7Z4L5 1316 aa20.78■□□□□ 0.92
HDAC8-209ENST00000373589 AATKQ6ZMQ8 1374 aa20.77■□□□□ 0.92
HDAC8-209ENST00000373589 POLKQ9UBT6 870 aa20.77■□□□□ 0.92
HDAC8-209ENST00000373589 ZRANB1Q9UGI0 708 aa20.77■□□□□ 0.92
HDAC8-209ENST00000373589 FMN2Q9NZ56 1722 aa20.77■□□□□ 0.91
HDAC8-209ENST00000373589 RUNDC1Q96C34 613 aa20.76■□□□□ 0.91
HDAC8-209ENST00000373589 COG3Q96JB2 828 aa20.75■□□□□ 0.91
HDAC8-209ENST00000373589 NALCNQ8IZF0 1738 aa20.75■□□□□ 0.91
HDAC8-209ENST00000373589 ERICH6BQ5W0A0 696 aa20.75■□□□□ 0.91
HDAC8-209ENST00000373589 NWD1Q149M9 1564 aa20.74■□□□□ 0.91
HDAC8-209ENST00000373589 IQSEC2Q5JU85 1478 aa20.74■□□□□ 0.91
HDAC8-209ENST00000373589 RGPD8O14715 1765 aaPredicted RBP20.73■□□□□ 0.91
HDAC8-209ENST00000373589 U2AF1L5P0DN76 240 aaPredicted RBP20.73■□□□□ 0.91
HDAC8-209ENST00000373589 FBLN1P23142 703 aa20.73■□□□□ 0.91
HDAC8-209ENST00000373589 U2AF1Q01081 240 aaKnown RBP eCLIP20.73■□□□□ 0.91
HDAC8-209ENST00000373589 GOLGA2Q08379 1002 aa20.73■□□□□ 0.91
HDAC8-209ENST00000373589 PMFBP1Q8TBY8 1022 aa20.73■□□□□ 0.91
HDAC8-209ENST00000373589 OVOS2A0A0J9YW53 1432 aa20.72■□□□□ 0.91
HDAC8-209ENST00000373589 OVOS2Q6IE36 1432 aa20.72■□□□□ 0.91
HDAC8-209ENST00000373589 ADGRL3Q9HAR2 1447 aa20.72■□□□□ 0.91
HDAC8-209ENST00000373589 IRX6P78412 446 aaPredicted RBP20.72■□□□□ 0.91
HDAC8-209ENST00000373589 DIAPH1O60610 1272 aaKnown RBP20.71■□□□□ 0.91
HDAC8-209ENST00000373589 POTEDQ86YR6 584 aa20.71■□□□□ 0.91
HDAC8-209ENST00000373589 TTC21AQ8NDW8 1320 aa20.7■□□□□ 0.9
HDAC8-209ENST00000373589 NCBP3Q53F19 620 aaKnown RBP20.7■□□□□ 0.9
HDAC8-209ENST00000373589 MAP2P11137 1827 aaKnown RBP20.7■□□□□ 0.9
HDAC8-209ENST00000373589 DUSP27Q5VZP5 1158 aa20.7■□□□□ 0.9
HDAC8-209ENST00000373589 TRMT2AQ8IZ69 625 aaKnown RBP20.7■□□□□ 0.9
HDAC8-209ENST00000373589 TCP11L2Q8N4U5 519 aa20.7■□□□□ 0.9
HDAC8-209ENST00000373589 RCAN3Q9UKA8 241 aa20.7■□□□□ 0.9
HDAC8-209ENST00000373589 SLFN5Q08AF3 891 aa20.69■□□□□ 0.9
HDAC8-209ENST00000373589 NGDNQ8NEJ9 315 aaKnown RBP20.69■□□□□ 0.9
HDAC8-209ENST00000373589 PHF23Q9BUL5 403 aaPredicted RBP20.69■□□□□ 0.9
HDAC8-209ENST00000373589 EMILIN1Q9Y6C2 1016 aa20.69■□□□□ 0.9
HDAC8-209ENST00000373589 CDK12Q9NYV4 1490 aaPredicted RBP20.69■□□□□ 0.9
HDAC8-209ENST00000373589 KDM4FA0A1W2PPD8 638 aa20.67■□□□□ 0.9
HDAC8-209ENST00000373589 U2SURPO15042 1029 aaKnown RBP20.67■□□□□ 0.9
HDAC8-209ENST00000373589 RBM33Q96EV2 1170 aaKnown RBP20.67■□□□□ 0.9
HDAC8-209ENST00000373589 PLEKHF1Q96S99 279 aa20.67■□□□□ 0.9
HDAC8-209ENST00000373589 USP31Q70CQ4 1352 aa20.67■□□□□ 0.9
HDAC8-209ENST00000373589 WWC1Q8IX03 1113 aa20.67■□□□□ 0.9
HDAC8-209ENST00000373589 CCDC27Q2M243 656 aa20.66■□□□□ 0.9
HDAC8-209ENST00000373589 PPM1GO15355 546 aaPredicted RBP20.65■□□□□ 0.9
HDAC8-209ENST00000373589 SPINK5Q9NQ38 1064 aaPredicted RBP20.64■□□□□ 0.9
HDAC8-209ENST00000373589 E9PSI1 815 aa20.64■□□□□ 0.89
HDAC8-209ENST00000373589 RRS1Q15050 365 aaKnown RBP20.64■□□□□ 0.89
HDAC8-209ENST00000373589 IL13P35225 146 aa20.63■□□□□ 0.89
HDAC8-209ENST00000373589 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
HDAC8-209ENST00000373589 RRP1P56182 461 aaKnown RBP20.62■□□□□ 0.89
HDAC8-209ENST00000373589 PHF8Q9UPP1 1060 aa20.62■□□□□ 0.89
HDAC8-209ENST00000373589 RRP7AQ9Y3A4 280 aaKnown RBP20.62■□□□□ 0.89
HDAC8-209ENST00000373589 FCHSD2O94868 740 aa20.61■□□□□ 0.89
HDAC8-209ENST00000373589 PNNQ9H307 717 aaKnown RBP20.61■□□□□ 0.89
HDAC8-209ENST00000373589 PIK3C2AO00443 1686 aa20.61■□□□□ 0.89
HDAC8-209ENST00000373589 NEUROD2Q15784 382 aa20.6■□□□□ 0.89
HDAC8-209ENST00000373589 PROSER2Q86WR7 435 aaPredicted RBP20.6■□□□□ 0.89
HDAC8-209ENST00000373589 WDR63Q8IWG1 891 aa20.6■□□□□ 0.89
HDAC8-209ENST00000373589 HSPA2P54652 639 aa20.59■□□□□ 0.89
HDAC8-209ENST00000373589 PPP4R2Q9NY27 417 aa20.59■□□□□ 0.89
HDAC8-209ENST00000373589 C14orf37Q86TY3 774 aa20.58■□□□□ 0.89
HDAC8-209ENST00000373589 RSPH6AQ9H0K4 717 aa20.58■□□□□ 0.89
HDAC8-209ENST00000373589 LMTK3Q96Q04 1460 aa20.58■□□□□ 0.88
HDAC8-209ENST00000373589 LRRC7Q96NW7 1537 aa20.58■□□□□ 0.88
HDAC8-209ENST00000373589 USP54Q70EL1 1684 aa20.58■□□□□ 0.88
HDAC8-209ENST00000373589 TMPOP42166 694 aaKnown RBP20.57■□□□□ 0.88
HDAC8-209ENST00000373589 MAPK8IP3Q9UPT6 1336 aa20.57■□□□□ 0.88
HDAC8-209ENST00000373589 ESCO1Q5FWF5 840 aa20.56■□□□□ 0.88
HDAC8-209ENST00000373589 C19orf44Q9H6X5 657 aa20.55■□□□□ 0.88
HDAC8-209ENST00000373589 NCOA3Q9Y6Q9 1424 aa20.55■□□□□ 0.88
HDAC8-209ENST00000373589 PEAK1Q9H792 1746 aa20.55■□□□□ 0.88
HDAC8-209ENST00000373589 STRCP1A6NGW2 1772 aa20.54■□□□□ 0.88
HDAC8-209ENST00000373589 MARF1Q9Y4F3 1742 aaKnown RBP20.54■□□□□ 0.88
HDAC8-209ENST00000373589 PRKAR2BP31323 418 aa20.53■□□□□ 0.88
HDAC8-209ENST00000373589 NLRP6P59044 892 aa20.53■□□□□ 0.88
HDAC8-209ENST00000373589 TRIM35Q9UPQ4 493 aa20.53■□□□□ 0.88
HDAC8-209ENST00000373589 MAP3K19Q56UN5 1328 aa20.53■□□□□ 0.88
HDAC8-209ENST00000373589 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
HDAC8-209ENST00000373589 SBNO1A3KN83 1393 aa20.51■□□□□ 0.87
HDAC8-209ENST00000373589 TMEM94Q12767 1356 aa20.51■□□□□ 0.87
HDAC8-209ENST00000373589 HMOX1P09601 288 aa20.51■□□□□ 0.87
HDAC8-209ENST00000373589 ABTB2Q8N961 1025 aa20.51■□□□□ 0.87
HDAC8-209ENST00000373589 ORAI2Q96SN7 254 aa20.51■□□□□ 0.87
HDAC8-209ENST00000373589 C1orf167Q5SNV9 1468 aa20.5■□□□□ 0.87
HDAC8-209ENST00000373589 PAK3O75914 559 aaPredicted RBP20.5■□□□□ 0.87
HDAC8-209ENST00000373589 RIPK4P57078 832 aa20.5■□□□□ 0.87
HDAC8-209ENST00000373589 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
HDAC8-209ENST00000373589 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
HDAC8-209ENST00000373589 DCCP43146 1447 aa20.49■□□□□ 0.87
HDAC8-209ENST00000373589 STRCQ7RTU9 1775 aa20.49■□□□□ 0.87
HDAC8-209ENST00000373589 FLT4P35916 1363 aa20.49■□□□□ 0.87
HDAC8-209ENST00000373589 SOX12O15370 315 aa20.49■□□□□ 0.87
HDAC8-209ENST00000373589 PSME1Q06323 249 aa20.49■□□□□ 0.87
HDAC8-209ENST00000373589 PHACTR3Q96KR7 559 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms