RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 BRINP3Q76B58 766 aa13.39□□□□□ -0.27
ITM2A-201ENST00000373298 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
ITM2A-201ENST00000373298 SRPK2P78362 688 aaKnown RBP13.38□□□□□ -0.27
ITM2A-201ENST00000373298 ESCO1Q5FWF5 840 aa13.37□□□□□ -0.27
ITM2A-201ENST00000373298 NUDT16Q96DE0 195 aaKnown RBP13.37□□□□□ -0.27
ITM2A-201ENST00000373298 TOPAZ1Q8N9V7 1692 aa13.37□□□□□ -0.27
ITM2A-201ENST00000373298 EVC2Q86UK5 1308 aa13.36□□□□□ -0.27
ITM2A-201ENST00000373298 CLCN6P51797 869 aa13.36□□□□□ -0.27
ITM2A-201ENST00000373298 PMFBP1Q8TBY8 1022 aa13.36□□□□□ -0.27
ITM2A-201ENST00000373298 XPCQ01831 940 aaPredicted RBP13.35□□□□□ -0.27
ITM2A-201ENST00000373298 FOXO3O43524 673 aa13.34□□□□□ -0.27
ITM2A-201ENST00000373298 ANKARQ7Z5J8 1434 aa13.34□□□□□ -0.27
ITM2A-201ENST00000373298 CABP1Q9NZU7 370 aa13.33□□□□□ -0.28
ITM2A-201ENST00000373298 PPIP5K1Q6PFW1 1433 aa13.32□□□□□ -0.28
ITM2A-201ENST00000373298 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
ITM2A-201ENST00000373298 SLC12A5Q9H2X9 1139 aa13.32□□□□□ -0.28
ITM2A-201ENST00000373298 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
ITM2A-201ENST00000373298 TMF1P82094 1093 aa13.31□□□□□ -0.28
ITM2A-201ENST00000373298 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
ITM2A-201ENST00000373298 MYOM1P52179 1685 aa13.31□□□□□ -0.28
ITM2A-201ENST00000373298 NHSL1Q5SYE7 1610 aa13.31□□□□□ -0.28
ITM2A-201ENST00000373298 ITSN1Q15811 1721 aa13.31□□□□□ -0.28
ITM2A-201ENST00000373298 HSPA1LP34931 641 aa13.31□□□□□ -0.28
ITM2A-201ENST00000373298 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
ITM2A-201ENST00000373298 CD163L1Q9NR16 1453 aa13.3□□□□□ -0.28
ITM2A-201ENST00000373298 KIF7Q2M1P5 1343 aa13.3□□□□□ -0.28
ITM2A-201ENST00000373298 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
ITM2A-201ENST00000373298 ACEP12821 1306 aa13.29□□□□□ -0.28
ITM2A-201ENST00000373298 WASHC2AQ641Q2 1341 aa13.29□□□□□ -0.28
ITM2A-201ENST00000373298 PXDNQ92626 1479 aa13.29□□□□□ -0.28
ITM2A-201ENST00000373298 PHLPP1O60346 1717 aa13.29□□□□□ -0.28
ITM2A-201ENST00000373298 COL16A1Q07092 1604 aaPredicted RBP13.29□□□□□ -0.28
ITM2A-201ENST00000373298 PLEKHG3A1L390 1219 aa13.28□□□□□ -0.28
ITM2A-201ENST00000373298 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
ITM2A-201ENST00000373298 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
ITM2A-201ENST00000373298 POLR3AO14802 1390 aaPredicted RBP13.27□□□□□ -0.29
ITM2A-201ENST00000373298 ATAD2Q6PL18 1390 aa13.27□□□□□ -0.29
ITM2A-201ENST00000373298 AKAP12Q02952 1782 aa13.26□□□□□ -0.29
ITM2A-201ENST00000373298 NGDNQ8NEJ9 315 aaKnown RBP13.26□□□□□ -0.29
ITM2A-201ENST00000373298 SOS2Q07890 1332 aaPredicted RBP13.26□□□□□ -0.29
ITM2A-201ENST00000373298 TRPM3Q9HCF6 1732 aaPredicted RBP13.26□□□□□ -0.29
ITM2A-201ENST00000373298 KRT28Q7Z3Y7 464 aa13.25□□□□□ -0.29
ITM2A-201ENST00000373298 A0A1W2PP64 1363 aa13.25□□□□□ -0.29
ITM2A-201ENST00000373298 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
ITM2A-201ENST00000373298 CPSF1Q10570 1443 aaKnown RBP13.25□□□□□ -0.29
ITM2A-201ENST00000373298 PSME1Q06323 249 aa13.24□□□□□ -0.29
ITM2A-201ENST00000373298 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
ITM2A-201ENST00000373298 CARD14Q9BXL6 1004 aa13.24□□□□□ -0.29
ITM2A-201ENST00000373298 NPHP3Q7Z494 1330 aa13.24□□□□□ -0.29
ITM2A-201ENST00000373298 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
ITM2A-201ENST00000373298 MON2Q7Z3U7 1717 aa13.23□□□□□ -0.29
ITM2A-201ENST00000373298 USP6P35125 1406 aa13.23□□□□□ -0.29
ITM2A-201ENST00000373298 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
ITM2A-201ENST00000373298 NRKQ7Z2Y5 1582 aa13.22□□□□□ -0.29
ITM2A-201ENST00000373298 NUTM2GQ5VZR2 741 aa13.22□□□□□ -0.29
ITM2A-201ENST00000373298 SLC24A1O60721 1099 aa13.21□□□□□ -0.29
ITM2A-201ENST00000373298 CDCA8Q53HL2 280 aa13.21□□□□□ -0.29
ITM2A-201ENST00000373298 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
ITM2A-201ENST00000373298 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
ITM2A-201ENST00000373298 KTN1Q86UP2 1357 aaKnown RBP13.21□□□□□ -0.29
ITM2A-201ENST00000373298 ALS2Q96Q42 1657 aa13.21□□□□□ -0.29
ITM2A-201ENST00000373298 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.3
ITM2A-201ENST00000373298 SPATA31A3Q5VYP0 1347 aa13.2□□□□□ -0.3
ITM2A-201ENST00000373298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
ITM2A-201ENST00000373298 PANK3Q9H999 370 aa13.2□□□□□ -0.3
ITM2A-201ENST00000373298 PIK3C2AO00443 1686 aa13.19□□□□□ -0.3
ITM2A-201ENST00000373298 ANKRD36BQ8N2N9 1353 aa13.19□□□□□ -0.3
ITM2A-201ENST00000373298 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
ITM2A-201ENST00000373298 CABLES1Q8TDN4 633 aa13.19□□□□□ -0.3
ITM2A-201ENST00000373298 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
ITM2A-201ENST00000373298 TNS3Q68CZ2 1445 aa13.18□□□□□ -0.3
ITM2A-201ENST00000373298 PNPLA6Q8IY17 1366 aa13.18□□□□□ -0.3
ITM2A-201ENST00000373298 TTC21BQ7Z4L5 1316 aa13.18□□□□□ -0.3
ITM2A-201ENST00000373298 MARF1Q9Y4F3 1742 aaKnown RBP13.18□□□□□ -0.3
ITM2A-201ENST00000373298 NME9Q86XW9 330 aa13.18□□□□□ -0.3
ITM2A-201ENST00000373298 SBNO1A3KN83 1393 aa13.18□□□□□ -0.3
ITM2A-201ENST00000373298 NINLQ9Y2I6 1382 aa13.18□□□□□ -0.3
ITM2A-201ENST00000373298 HDGFL2Q7Z4V5 671 aaPredicted RBP13.17□□□□□ -0.3
ITM2A-201ENST00000373298 LRRC59Q96AG4 307 aaKnown RBP13.17□□□□□ -0.3
ITM2A-201ENST00000373298 TERF2IPQ9NYB0 399 aa13.17□□□□□ -0.3
ITM2A-201ENST00000373298 NSD3Q9BZ95 1437 aa13.17□□□□□ -0.3
ITM2A-201ENST00000373298 MED1Q15648 1581 aaPredicted RBP13.17□□□□□ -0.3
ITM2A-201ENST00000373298 DCBLD2Q96PD2 775 aa13.17□□□□□ -0.3
ITM2A-201ENST00000373298 SHPRHQ149N8 1683 aa13.16□□□□□ -0.3
ITM2A-201ENST00000373298 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
ITM2A-201ENST00000373298 ABTB2Q8N961 1025 aa13.16□□□□□ -0.3
ITM2A-201ENST00000373298 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
ITM2A-201ENST00000373298 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
ITM2A-201ENST00000373298 LRP6O75581 1613 aa13.15□□□□□ -0.3
ITM2A-201ENST00000373298 ABCA3Q99758 1704 aa13.15□□□□□ -0.3
ITM2A-201ENST00000373298 JCADQ9P266 1359 aa13.15□□□□□ -0.3
ITM2A-201ENST00000373298 COL22A1Q8NFW1 1626 aaPredicted RBP13.14□□□□□ -0.31
ITM2A-201ENST00000373298 PER1O15534 1290 aaPredicted RBP13.14□□□□□ -0.31
ITM2A-201ENST00000373298 FBLN1P23142 703 aa13.14□□□□□ -0.31
ITM2A-201ENST00000373298 NUTM2BA6NNL0 878 aaPredicted RBP13.13□□□□□ -0.31
ITM2A-201ENST00000373298 NUTM2EB1AL46 878 aaPredicted RBP13.13□□□□□ -0.31
ITM2A-201ENST00000373298 FYB1O15117 783 aa13.13□□□□□ -0.31
ITM2A-201ENST00000373298 DDX10Q13206 875 aaKnown RBP13.13□□□□□ -0.31
ITM2A-201ENST00000373298 NUTM2AQ8IVF1 878 aaPredicted RBP13.13□□□□□ -0.31
ITM2A-201ENST00000373298 GGNBP2Q9H3C7 697 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms