RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 SLC4A3P48751 1232 aa30.74■■■□□ 2.51
CDK9-201ENST00000373264 PCDHB15Q9Y5E8 787 aa30.73■■■□□ 2.51
CDK9-201ENST00000373264 NCKAP5LQ9HCH0 1330 aa30.72■■■□□ 2.51
CDK9-201ENST00000373264 MYH16Q9H6N6 1097 aa30.71■■■□□ 2.51
CDK9-201ENST00000373264 AGLP35573 1532 aa30.71■■■□□ 2.51
CDK9-201ENST00000373264 EXOSC9Q06265 439 aaKnown RBP30.7■■■□□ 2.5
CDK9-201ENST00000373264 ANKRD26Q9UPS8 1709 aa30.69■■■□□ 2.5
CDK9-201ENST00000373264 SPATA31D1Q6ZQQ2 1576 aa30.69■■■□□ 2.5
CDK9-201ENST00000373264 METP08581 1390 aa30.69■■■□□ 2.5
CDK9-201ENST00000373264 DIAPH1O60610 1272 aaKnown RBP30.68■■■□□ 2.5
CDK9-201ENST00000373264 TXNDC2Q86VQ3 553 aa30.68■■■□□ 2.5
CDK9-201ENST00000373264 ZRANB1Q9UGI0 708 aa30.68■■■□□ 2.5
CDK9-201ENST00000373264 MAPK8IP3Q9UPT6 1336 aa30.67■■■□□ 2.5
CDK9-201ENST00000373264 SETD1AO15047 1707 aaKnown RBP30.67■■■□□ 2.5
CDK9-201ENST00000373264 REREQ9P2R6 1566 aa30.67■■■□□ 2.5
CDK9-201ENST00000373264 RIPK4P57078 832 aa30.66■■■□□ 2.5
CDK9-201ENST00000373264 DEKP35659 375 aaKnown RBP30.65■■■□□ 2.5
CDK9-201ENST00000373264 MED14O60244 1454 aa30.65■■■□□ 2.5
CDK9-201ENST00000373264 POLKQ9UBT6 870 aa30.64■■■□□ 2.49
CDK9-201ENST00000373264 KIF20BQ96Q89 1820 aa30.63■■■□□ 2.49
CDK9-201ENST00000373264 PPP6R1Q9UPN7 881 aa30.63■■■□□ 2.49
CDK9-201ENST00000373264 NRXN3Q9Y4C0 1643 aa30.62■■■□□ 2.49
CDK9-201ENST00000373264 NME9Q86XW9 330 aa30.62■■■□□ 2.49
CDK9-201ENST00000373264 PNPLA6Q8IY17 1366 aa30.61■■■□□ 2.49
CDK9-201ENST00000373264 ZMYM3Q14202 1370 aa30.61■■■□□ 2.49
CDK9-201ENST00000373264 EMILIN1Q9Y6C2 1016 aa30.61■■■□□ 2.49
CDK9-201ENST00000373264 HMOX1P09601 288 aa30.6■■■□□ 2.49
CDK9-201ENST00000373264 SSH1Q8WYL5 1049 aa30.6■■■□□ 2.49
CDK9-201ENST00000373264 SMC4Q9NTJ3 1288 aa30.6■■■□□ 2.49
CDK9-201ENST00000373264 SEC24BO95487 1268 aa30.58■■■□□ 2.49
CDK9-201ENST00000373264 PRKAR2BP31323 418 aa30.58■■■□□ 2.49
CDK9-201ENST00000373264 DLC1Q96QB1 1528 aa30.58■■■□□ 2.49
CDK9-201ENST00000373264 WASLO00401 505 aaPredicted RBP30.57■■■□□ 2.48
CDK9-201ENST00000373264 NCBP3Q53F19 620 aaKnown RBP30.56■■■□□ 2.48
CDK9-201ENST00000373264 PHACTR3Q96KR7 559 aa30.56■■■□□ 2.48
CDK9-201ENST00000373264 ZKSCAN2Q63HK3 967 aa30.56■■■□□ 2.48
CDK9-201ENST00000373264 ESF1Q9H501 851 aaKnown RBP30.56■■■□□ 2.48
CDK9-201ENST00000373264 PPIP5K1Q6PFW1 1433 aa30.55■■■□□ 2.48
CDK9-201ENST00000373264 LRRC7Q96NW7 1537 aa30.55■■■□□ 2.48
CDK9-201ENST00000373264 THUMPD2Q9BTF0 503 aaKnown RBP30.55■■■□□ 2.48
CDK9-201ENST00000373264 TRIM27P14373 513 aa30.55■■■□□ 2.48
CDK9-201ENST00000373264 MVPQ14764 893 aaKnown RBP30.55■■■□□ 2.48
CDK9-201ENST00000373264 RSPH6AQ9H0K4 717 aa30.54■■■□□ 2.48
CDK9-201ENST00000373264 FTSJ3Q8IY81 847 aaKnown RBP30.54■■■□□ 2.48
CDK9-201ENST00000373264 DZIP1LQ8IYY4 767 aaKnown RBP30.54■■■□□ 2.48
CDK9-201ENST00000373264 MAP2P11137 1827 aaKnown RBP30.54■■■□□ 2.48
CDK9-201ENST00000373264 DDRGK1Q96HY6 314 aa30.53■■■□□ 2.48
CDK9-201ENST00000373264 KIF13AQ9H1H9 1805 aa30.53■■■□□ 2.48
CDK9-201ENST00000373264 ATP7BP35670 1465 aa30.52■■■□□ 2.48
CDK9-201ENST00000373264 NUDT16Q96DE0 195 aaKnown RBP30.52■■■□□ 2.48
CDK9-201ENST00000373264 PDZRN3Q9UPQ7 1066 aa30.52■■■□□ 2.48
CDK9-201ENST00000373264 RTL5Q5HYW3 569 aaPredicted RBP30.51■■■□□ 2.48
CDK9-201ENST00000373264 NOB1Q9ULX3 412 aaKnown RBP30.51■■■□□ 2.48
CDK9-201ENST00000373264 NEFMP07197 916 aa30.5■■■□□ 2.47
CDK9-201ENST00000373264 RRS1Q15050 365 aaKnown RBP30.5■■■□□ 2.47
CDK9-201ENST00000373264 PMFBP1Q8TBY8 1022 aa30.5■■■□□ 2.47
CDK9-201ENST00000373264 USP19O94966 1318 aa30.49■■■□□ 2.47
CDK9-201ENST00000373264 CPSF1Q10570 1443 aaKnown RBP30.49■■■□□ 2.47
CDK9-201ENST00000373264 NUTM2FA1L443 756 aa30.49■■■□□ 2.47
CDK9-201ENST00000373264 FCHSD2O94868 740 aa30.49■■■□□ 2.47
CDK9-201ENST00000373264 CPS1P31327 1500 aa30.48■■■□□ 2.47
CDK9-201ENST00000373264 ITPRIPQ8IWB1 547 aa30.47■■■□□ 2.47
CDK9-201ENST00000373264 FAM135BQ49AJ0 1406 aa30.46■■■□□ 2.47
CDK9-201ENST00000373264 PRR36Q9H6K5 1346 aa30.46■■■□□ 2.47
CDK9-201ENST00000373264 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.45■■■□□ 2.47
CDK9-201ENST00000373264 IL16Q14005 1332 aa30.44■■■□□ 2.46
CDK9-201ENST00000373264 ATF7IPQ6VMQ6 1270 aa30.44■■■□□ 2.46
CDK9-201ENST00000373264 EDC4Q6P2E9 1401 aaKnown RBP30.43■■■□□ 2.46
CDK9-201ENST00000373264 CT47B1P0C2W7 299 aaPredicted RBP30.43■■■□□ 2.46
CDK9-201ENST00000373264 IL13P35225 146 aa30.43■■■□□ 2.46
CDK9-201ENST00000373264 PLPPR3Q6T4P5 718 aa30.43■■■□□ 2.46
CDK9-201ENST00000373264 TMEM57Q8N5G2 664 aa30.43■■■□□ 2.46
CDK9-201ENST00000373264 TNRQ92752 1358 aa30.43■■■□□ 2.46
CDK9-201ENST00000373264 RWDD1Q9H446 243 aaPredicted RBP30.42■■■□□ 2.46
CDK9-201ENST00000373264 CEBPAP49715 358 aaPredicted RBP30.41■■■□□ 2.46
CDK9-201ENST00000373264 BCL11AQ9H165 835 aa30.41■■■□□ 2.46
CDK9-201ENST00000373264 CCDC61Q9Y6R9 512 aa30.41■■■□□ 2.46
CDK9-201ENST00000373264 ROBO2Q9HCK4 1378 aa30.41■■■□□ 2.46
CDK9-201ENST00000373264 CDC42BPGQ6DT37 1551 aa30.41■■■□□ 2.46
CDK9-201ENST00000373264 VIRMAQ69YN4 1812 aaKnown RBP30.41■■■□□ 2.46
CDK9-201ENST00000373264 ELL2O00472 640 aaPredicted RBP30.39■■■□□ 2.46
CDK9-201ENST00000373264 PNNQ9H307 717 aaKnown RBP30.39■■■□□ 2.46
CDK9-201ENST00000373264 TSPYL6Q8N831 410 aa30.38■■■□□ 2.45
CDK9-201ENST00000373264 LTKP29376 864 aa30.38■■■□□ 2.45
CDK9-201ENST00000373264 AAMPQ13685 434 aa30.38■■■□□ 2.45
CDK9-201ENST00000373264 NFE2L2Q16236 605 aa30.38■■■□□ 2.45
CDK9-201ENST00000373264 DAXXQ9UER7 740 aaPredicted RBP30.38■■■□□ 2.45
CDK9-201ENST00000373264 COG3Q96JB2 828 aa30.37■■■□□ 2.45
CDK9-201ENST00000373264 TMEM2Q9UHN6 1383 aa30.37■■■□□ 2.45
CDK9-201ENST00000373264 FAM83GA6ND36 823 aa30.36■■■□□ 2.45
CDK9-201ENST00000373264 DCTN1Q14203 1278 aa30.34■■■□□ 2.45
CDK9-201ENST00000373264 SLC26A8Q96RN1 970 aa30.34■■■□□ 2.45
CDK9-201ENST00000373264 DDX19BQ9UMR2 479 aa30.33■■■□□ 2.45
CDK9-201ENST00000373264 ADAMTS13Q76LX8 1427 aa30.32■■■□□ 2.44
CDK9-201ENST00000373264 UBR1Q8IWV7 1749 aa30.32■■■□□ 2.44
CDK9-201ENST00000373264 TECPR2O15040 1411 aa30.32■■■□□ 2.44
CDK9-201ENST00000373264 MON2Q7Z3U7 1717 aa30.31■■■□□ 2.44
CDK9-201ENST00000373264 CDK12Q9NYV4 1490 aaPredicted RBP30.3■■■□□ 2.44
CDK9-201ENST00000373264 AEBP1Q8IUX7 1158 aa30.3■■■□□ 2.44
CDK9-201ENST00000373264 SOX12O15370 315 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms