RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 WDR63Q8IWG1 891 aa16.67■□□□□ 0.26
NCDN-203ENST00000373253 TRIM27P14373 513 aa16.66■□□□□ 0.26
NCDN-203ENST00000373253 PDE3AQ14432 1141 aa16.66■□□□□ 0.26
NCDN-203ENST00000373253 TSPYL6Q8N831 410 aa16.66■□□□□ 0.26
NCDN-203ENST00000373253 TWISTNBQ3B726 338 aaPredicted RBP16.65■□□□□ 0.26
NCDN-203ENST00000373253 GZF1Q9H116 711 aaPredicted RBP16.65■□□□□ 0.26
NCDN-203ENST00000373253 BECN1Q14457 450 aa16.65■□□□□ 0.26
NCDN-203ENST00000373253 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
NCDN-203ENST00000373253 YTHDC2Q9H6S0 1430 aaKnown RBP16.64■□□□□ 0.25
NCDN-203ENST00000373253 ESCO1Q5FWF5 840 aa16.64■□□□□ 0.25
NCDN-203ENST00000373253 IL27Q8NEV9 243 aa16.64■□□□□ 0.25
NCDN-203ENST00000373253 ZMYM3Q14202 1370 aa16.64■□□□□ 0.25
NCDN-203ENST00000373253 ACEP12821 1306 aa16.63■□□□□ 0.25
NCDN-203ENST00000373253 LTKP29376 864 aa16.63■□□□□ 0.25
NCDN-203ENST00000373253 MVPQ14764 893 aaKnown RBP16.63■□□□□ 0.25
NCDN-203ENST00000373253 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
NCDN-203ENST00000373253 RIMS2Q9UQ26 1411 aa16.63■□□□□ 0.25
NCDN-203ENST00000373253 PSME1Q06323 249 aa16.63■□□□□ 0.25
NCDN-203ENST00000373253 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
NCDN-203ENST00000373253 SEC24BO95487 1268 aa16.62■□□□□ 0.25
NCDN-203ENST00000373253 FOXO3O43524 673 aa16.62■□□□□ 0.25
NCDN-203ENST00000373253 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
NCDN-203ENST00000373253 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
NCDN-203ENST00000373253 TSPYL4Q9UJ04 414 aa16.61■□□□□ 0.25
NCDN-203ENST00000373253 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
NCDN-203ENST00000373253 FCHSD2O94868 740 aa16.61■□□□□ 0.25
NCDN-203ENST00000373253 CEP152O94986 1710 aa16.6■□□□□ 0.25
NCDN-203ENST00000373253 GNAI1P63096 354 aa16.6■□□□□ 0.25
NCDN-203ENST00000373253 NFE2L2Q16236 605 aa16.59■□□□□ 0.25
NCDN-203ENST00000373253 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
NCDN-203ENST00000373253 TRIM35Q9UPQ4 493 aa16.59■□□□□ 0.25
NCDN-203ENST00000373253 CALD1Q05682 793 aaKnown RBP16.59■□□□□ 0.25
NCDN-203ENST00000373253 METP08581 1390 aa16.59■□□□□ 0.25
NCDN-203ENST00000373253 SPHKAPQ2M3C7 1700 aa16.59■□□□□ 0.25
NCDN-203ENST00000373253 MADDQ8WXG6 1647 aa16.58■□□□□ 0.24
NCDN-203ENST00000373253 NOL8Q76FK4 1167 aaKnown RBP16.58■□□□□ 0.24
NCDN-203ENST00000373253 ZNF521Q96K83 1311 aa16.58■□□□□ 0.24
NCDN-203ENST00000373253 EFCAB6Q5THR3 1501 aa16.58■□□□□ 0.24
NCDN-203ENST00000373253 F6X3S4 739 aa16.58■□□□□ 0.24
NCDN-203ENST00000373253 MLH3Q9UHC1 1453 aa16.58■□□□□ 0.24
NCDN-203ENST00000373253 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
NCDN-203ENST00000373253 PPIP5K1Q6PFW1 1433 aa16.57■□□□□ 0.24
NCDN-203ENST00000373253 C8orf58Q8NAV2 365 aa16.57■□□□□ 0.24
NCDN-203ENST00000373253 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
NCDN-203ENST00000373253 MBIPQ9NS73 344 aa16.57■□□□□ 0.24
NCDN-203ENST00000373253 TET3O43151 1660 aa16.57■□□□□ 0.24
NCDN-203ENST00000373253 ZMYM4Q5VZL5 1548 aa16.57■□□□□ 0.24
NCDN-203ENST00000373253 STK31Q9BXU1 1019 aa16.57■□□□□ 0.24
NCDN-203ENST00000373253 FKBP5Q13451 457 aaPredicted RBP16.56■□□□□ 0.24
NCDN-203ENST00000373253 RNF17Q9BXT8 1623 aaKnown RBP16.56■□□□□ 0.24
NCDN-203ENST00000373253 THEMISQ8N1K5 641 aaPredicted RBP16.56■□□□□ 0.24
NCDN-203ENST00000373253 KIF1BO60333 1816 aa16.56■□□□□ 0.24
NCDN-203ENST00000373253 LMOD3Q0VAK6 560 aa16.56■□□□□ 0.24
NCDN-203ENST00000373253 ZNF330Q9Y3S2 320 aaPredicted RBP16.56■□□□□ 0.24
NCDN-203ENST00000373253 TNRQ92752 1358 aa16.55■□□□□ 0.24
NCDN-203ENST00000373253 ABCC3O15438 1527 aa16.55■□□□□ 0.24
NCDN-203ENST00000373253 FRAT2O75474 233 aaPredicted RBP16.55■□□□□ 0.24
NCDN-203ENST00000373253 KIDINS220Q9ULH0 1771 aa16.55■□□□□ 0.24
NCDN-203ENST00000373253 KIF16BQ96L93 1317 aa16.55■□□□□ 0.24
NCDN-203ENST00000373253 ABCA9Q8IUA7 1624 aa16.55■□□□□ 0.24
NCDN-203ENST00000373253 PPRC1Q5VV67 1664 aaKnown RBP16.54■□□□□ 0.24
NCDN-203ENST00000373253 HSP90AB1P08238 724 aaKnown RBP16.54■□□□□ 0.24
NCDN-203ENST00000373253 OS9Q13438 667 aaPredicted RBP16.54■□□□□ 0.24
NCDN-203ENST00000373253 C8orf34Q49A92 452 aa16.54■□□□□ 0.24
NCDN-203ENST00000373253 KCNA6P17658 529 aa16.53■□□□□ 0.24
NCDN-203ENST00000373253 ZNF692Q9BU19 519 aaPredicted RBP16.53■□□□□ 0.24
NCDN-203ENST00000373253 KDM5AP29375 1690 aaKnown RBP16.53■□□□□ 0.24
NCDN-203ENST00000373253 NFKBIBQ15653 356 aa16.53■□□□□ 0.24
NCDN-203ENST00000373253 ABCA6Q8N139 1617 aa16.53■□□□□ 0.24
NCDN-203ENST00000373253 ZC3H6P61129 1189 aaKnown RBP16.52■□□□□ 0.24
NCDN-203ENST00000373253 MAP3K4Q9Y6R4 1608 aa16.52■□□□□ 0.24
NCDN-203ENST00000373253 HECW2Q9P2P5 1572 aa16.52■□□□□ 0.24
NCDN-203ENST00000373253 EIF4A2Q14240 407 aaKnown RBP16.52■□□□□ 0.24
NCDN-203ENST00000373253 FOXD4L5Q5VV16 416 aaPredicted RBP16.52■□□□□ 0.23
NCDN-203ENST00000373253 FOXD4L4Q8WXT5 416 aaPredicted RBP16.52■□□□□ 0.23
NCDN-203ENST00000373253 CCDC9Q9Y3X0 531 aaKnown RBP16.52■□□□□ 0.23
NCDN-203ENST00000373253 NEO1Q92859 1461 aa16.52■□□□□ 0.23
NCDN-203ENST00000373253 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
NCDN-203ENST00000373253 TTC21BQ7Z4L5 1316 aa16.51■□□□□ 0.23
NCDN-203ENST00000373253 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
NCDN-203ENST00000373253 ANXA1P04083 346 aa16.5■□□□□ 0.23
NCDN-203ENST00000373253 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
NCDN-203ENST00000373253 NPC1L1Q9UHC9 1359 aa16.5■□□□□ 0.23
NCDN-203ENST00000373253 HSCBQ8IWL3 235 aa16.5■□□□□ 0.23
NCDN-203ENST00000373253 TRIM6-TRIM34B2RNG4 842 aa16.5■□□□□ 0.23
NCDN-203ENST00000373253 KDM2BQ8NHM5 1336 aa16.49■□□□□ 0.23
NCDN-203ENST00000373253 AIMP1Q12904 312 aaKnown RBP16.49■□□□□ 0.23
NCDN-203ENST00000373253 TAOK2Q9UL54 1235 aa16.49■□□□□ 0.23
NCDN-203ENST00000373253 C22orf23Q9BZE7 217 aa16.48■□□□□ 0.23
NCDN-203ENST00000373253 MYOM2P54296 1465 aa16.48■□□□□ 0.23
NCDN-203ENST00000373253 INO80Q9ULG1 1556 aaPredicted RBP16.48■□□□□ 0.23
NCDN-203ENST00000373253 TRMT2AQ8IZ69 625 aaKnown RBP16.48■□□□□ 0.23
NCDN-203ENST00000373253 TEFQ10587 303 aa16.48■□□□□ 0.23
NCDN-203ENST00000373253 FOXD4L6Q3SYB3 417 aaPredicted RBP16.48■□□□□ 0.23
NCDN-203ENST00000373253 TSHZ3Q63HK5 1081 aa16.48■□□□□ 0.23
NCDN-203ENST00000373253 FOXD4L3Q6VB84 417 aaPredicted RBP16.48■□□□□ 0.23
NCDN-203ENST00000373253 PRR36Q9H6K5 1346 aa16.48■□□□□ 0.23
NCDN-203ENST00000373253 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
NCDN-203ENST00000373253 USP35Q9P2H5 1018 aa16.47■□□□□ 0.23
NCDN-203ENST00000373253 PROSER2Q86WR7 435 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms