RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ATP7BP35670 1465 aa24.27■■□□□ 1.48
USP49-202ENST00000373010 FBLN1P23142 703 aa24.26■■□□□ 1.47
USP49-202ENST00000373010 NCBP3Q53F19 620 aaKnown RBP24.26■■□□□ 1.47
USP49-202ENST00000373010 WASLO00401 505 aaPredicted RBP24.25■■□□□ 1.47
USP49-202ENST00000373010 DIAPH1O60610 1272 aaKnown RBP24.25■■□□□ 1.47
USP49-202ENST00000373010 COG6Q9Y2V7 657 aa24.25■■□□□ 1.47
USP49-202ENST00000373010 TMPOP42166 694 aaKnown RBP24.24■■□□□ 1.47
USP49-202ENST00000373010 BCL2L13Q9BXK5 485 aa24.24■■□□□ 1.47
USP49-202ENST00000373010 MYH16Q9H6N6 1097 aa24.24■■□□□ 1.47
USP49-202ENST00000373010 PNPLA6Q8IY17 1366 aa24.23■■□□□ 1.47
USP49-202ENST00000373010 MAPK8IP3Q9UPT6 1336 aa24.23■■□□□ 1.47
USP49-202ENST00000373010 PPIP5K1Q6PFW1 1433 aa24.22■■□□□ 1.47
USP49-202ENST00000373010 UBR1Q8IWV7 1749 aa24.22■■□□□ 1.47
USP49-202ENST00000373010 TRIM35Q9UPQ4 493 aa24.22■■□□□ 1.47
USP49-202ENST00000373010 TNNQ9UQP3 1299 aa24.22■■□□□ 1.47
USP49-202ENST00000373010 PPM1GO15355 546 aaPredicted RBP24.21■■□□□ 1.47
USP49-202ENST00000373010 TSR2Q969E8 191 aaKnown RBP24.21■■□□□ 1.47
USP49-202ENST00000373010 NCKAP5LQ9HCH0 1330 aa24.21■■□□□ 1.47
USP49-202ENST00000373010 HDGFP51858 240 aaKnown RBP24.21■■□□□ 1.47
USP49-202ENST00000373010 KNDC1Q76NI1 1749 aa24.2■■□□□ 1.47
USP49-202ENST00000373010 POLKQ9UBT6 870 aa24.2■■□□□ 1.46
USP49-202ENST00000373010 TMEM2Q9UHN6 1383 aa24.2■■□□□ 1.46
USP49-202ENST00000373010 CPSF1Q10570 1443 aaKnown RBP24.19■■□□□ 1.46
USP49-202ENST00000373010 IGHDP01880 384 aa24.19■■□□□ 1.46
USP49-202ENST00000373010 MAP2P11137 1827 aaKnown RBP24.19■■□□□ 1.46
USP49-202ENST00000373010 NUDT16Q96DE0 195 aaKnown RBP24.19■■□□□ 1.46
USP49-202ENST00000373010 RLBP1P12271 317 aa24.18■■□□□ 1.46
USP49-202ENST00000373010 CLUAP1Q96AJ1 413 aa24.18■■□□□ 1.46
USP49-202ENST00000373010 NME9Q86XW9 330 aa24.18■■□□□ 1.46
USP49-202ENST00000373010 ZRANB1Q9UGI0 708 aa24.18■■□□□ 1.46
USP49-202ENST00000373010 TECPR2O15040 1411 aa24.17■■□□□ 1.46
USP49-202ENST00000373010 FAM135BQ49AJ0 1406 aa24.17■■□□□ 1.46
USP49-202ENST00000373010 EDC4Q6P2E9 1401 aaKnown RBP24.17■■□□□ 1.46
USP49-202ENST00000373010 RGS3P49796 1198 aa24.16■■□□□ 1.46
USP49-202ENST00000373010 RIPK4P57078 832 aa24.16■■□□□ 1.46
USP49-202ENST00000373010 ZBTB47Q9UFB7 747 aaPredicted RBP24.16■■□□□ 1.46
USP49-202ENST00000373010 CPS1P31327 1500 aa24.16■■□□□ 1.46
USP49-202ENST00000373010 SIRT1Q96EB6 747 aa24.15■■□□□ 1.46
USP49-202ENST00000373010 EXOSC9Q06265 439 aaKnown RBP24.14■■□□□ 1.46
USP49-202ENST00000373010 LRRC7Q96NW7 1537 aa24.14■■□□□ 1.46
USP49-202ENST00000373010 CEBPAP49715 358 aaPredicted RBP24.14■■□□□ 1.45
USP49-202ENST00000373010 EMILIN1Q9Y6C2 1016 aa24.14■■□□□ 1.45
USP49-202ENST00000373010 CDC42BPGQ6DT37 1551 aa24.14■■□□□ 1.45
USP49-202ENST00000373010 ADAMTS13Q76LX8 1427 aa24.13■■□□□ 1.45
USP49-202ENST00000373010 ROBO2Q9HCK4 1378 aa24.13■■□□□ 1.45
USP49-202ENST00000373010 CCDC61Q9Y6R9 512 aa24.13■■□□□ 1.45
USP49-202ENST00000373010 FCHSD2O94868 740 aa24.12■■□□□ 1.45
USP49-202ENST00000373010 LTKP29376 864 aa24.12■■□□□ 1.45
USP49-202ENST00000373010 PNNQ9H307 717 aaKnown RBP24.12■■□□□ 1.45
USP49-202ENST00000373010 PRR36Q9H6K5 1346 aa24.11■■□□□ 1.45
USP49-202ENST00000373010 PRKAR2BP31323 418 aa24.11■■□□□ 1.45
USP49-202ENST00000373010 RSPH6AQ9H0K4 717 aa24.11■■□□□ 1.45
USP49-202ENST00000373010 MON2Q7Z3U7 1717 aa24.11■■□□□ 1.45
USP49-202ENST00000373010 HMOX1P09601 288 aa24.09■■□□□ 1.45
USP49-202ENST00000373010 AKAP12Q02952 1782 aa24.09■■□□□ 1.45
USP49-202ENST00000373010 IL16Q14005 1332 aa24.09■■□□□ 1.45
USP49-202ENST00000373010 FAM161AQ3B820 660 aa24.09■■□□□ 1.45
USP49-202ENST00000373010 C8orf34Q49A92 452 aa24.09■■□□□ 1.45
USP49-202ENST00000373010 ITSN1Q15811 1721 aa24.08■■□□□ 1.45
USP49-202ENST00000373010 CT47B1P0C2W7 299 aaPredicted RBP24.08■■□□□ 1.45
USP49-202ENST00000373010 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.44
USP49-202ENST00000373010 SMC4Q9NTJ3 1288 aa24.07■■□□□ 1.44
USP49-202ENST00000373010 PCDHB15Q9Y5E8 787 aa24.07■■□□□ 1.44
USP49-202ENST00000373010 ZKSCAN2Q63HK3 967 aa24.06■■□□□ 1.44
USP49-202ENST00000373010 COG3Q96JB2 828 aa24.06■■□□□ 1.44
USP49-202ENST00000373010 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.06■■□□□ 1.44
USP49-202ENST00000373010 PHACTR3Q96KR7 559 aa24.06■■□□□ 1.44
USP49-202ENST00000373010 PLEKHG1Q9ULL1 1385 aa24.06■■□□□ 1.44
USP49-202ENST00000373010 SSH1Q8WYL5 1049 aa24.05■■□□□ 1.44
USP49-202ENST00000373010 C3P01024 1663 aa24.05■■□□□ 1.44
USP49-202ENST00000373010 IL13P35225 146 aa24.05■■□□□ 1.44
USP49-202ENST00000373010 RRS1Q15050 365 aaKnown RBP24.05■■□□□ 1.44
USP49-202ENST00000373010 SLC26A8Q96RN1 970 aa24.04■■□□□ 1.44
USP49-202ENST00000373010 CDK12Q9NYV4 1490 aaPredicted RBP24.04■■□□□ 1.44
USP49-202ENST00000373010 NUTM2FA1L443 756 aa24.03■■□□□ 1.44
USP49-202ENST00000373010 AATKQ6ZMQ8 1374 aa24.03■■□□□ 1.44
USP49-202ENST00000373010 NEFMP07197 916 aa24.03■■□□□ 1.44
USP49-202ENST00000373010 MVPQ14764 893 aaKnown RBP24.03■■□□□ 1.44
USP49-202ENST00000373010 DZIP1LQ8IYY4 767 aaKnown RBP24.03■■□□□ 1.44
USP49-202ENST00000373010 AAMPQ13685 434 aa24.02■■□□□ 1.44
USP49-202ENST00000373010 FTSJ3Q8IY81 847 aaKnown RBP24.02■■□□□ 1.44
USP49-202ENST00000373010 PMFBP1Q8TBY8 1022 aa24.02■■□□□ 1.44
USP49-202ENST00000373010 ZNF692Q9BU19 519 aaPredicted RBP24.01■■□□□ 1.43
USP49-202ENST00000373010 NFE2L2Q16236 605 aa24.01■■□□□ 1.43
USP49-202ENST00000373010 PTPRUQ92729 1446 aa24.01■■□□□ 1.43
USP49-202ENST00000373010 NBR1Q14596 966 aa24■■□□□ 1.43
USP49-202ENST00000373010 TRIM27P14373 513 aa24■■□□□ 1.43
USP49-202ENST00000373010 THUMPD2Q9BTF0 503 aaKnown RBP24■■□□□ 1.43
USP49-202ENST00000373010 LAS1LQ9Y4W2 734 aaKnown RBP24■■□□□ 1.43
USP49-202ENST00000373010 NOB1Q9ULX3 412 aaKnown RBP23.98■■□□□ 1.43
USP49-202ENST00000373010 EID1Q9Y6B2 187 aa23.98■■□□□ 1.43
USP49-202ENST00000373010 ACEP12821 1306 aa23.98■■□□□ 1.43
USP49-202ENST00000373010 TOPAZ1Q8N9V7 1692 aa23.97■■□□□ 1.43
USP49-202ENST00000373010 TTC21BQ7Z4L5 1316 aa23.96■■□□□ 1.43
USP49-202ENST00000373010 ATF7IPQ6VMQ6 1270 aa23.96■■□□□ 1.43
USP49-202ENST00000373010 NRKQ7Z2Y5 1582 aa23.95■■□□□ 1.42
USP49-202ENST00000373010 FER1L4A9Z1Z3 1794 aa23.94■■□□□ 1.42
USP49-202ENST00000373010 RWDD1Q9H446 243 aaPredicted RBP23.94■■□□□ 1.42
USP49-202ENST00000373010 DDRGK1Q96HY6 314 aa23.93■■□□□ 1.42
USP49-202ENST00000373010 AMOTL2Q9Y2J4 779 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms