RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 USP6P35125 1406 aa21.79■■□□□ 1.08
C9orf78-201ENST00000372447 PANK3Q9H999 370 aa21.79■■□□□ 1.08
C9orf78-201ENST00000372447 PAK3O75914 559 aaPredicted RBP21.78■■□□□ 1.08
C9orf78-201ENST00000372447 CARD14Q9BXL6 1004 aa21.78■■□□□ 1.08
C9orf78-201ENST00000372447 PHLPP1O60346 1717 aa21.77■■□□□ 1.08
C9orf78-201ENST00000372447 LRRC59Q96AG4 307 aaKnown RBP21.77■■□□□ 1.08
C9orf78-201ENST00000372447 SSH2Q76I76 1423 aa21.77■■□□□ 1.08
C9orf78-201ENST00000372447 CCDC184Q52MB2 194 aa21.76■■□□□ 1.07
C9orf78-201ENST00000372447 SPATA31A3Q5VYP0 1347 aa21.76■■□□□ 1.07
C9orf78-201ENST00000372447 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
C9orf78-201ENST00000372447 COL16A1Q07092 1604 aaPredicted RBP21.75■■□□□ 1.07
C9orf78-201ENST00000372447 SBNO1A3KN83 1393 aa21.75■■□□□ 1.07
C9orf78-201ENST00000372447 TTC21BQ7Z4L5 1316 aa21.75■■□□□ 1.07
C9orf78-201ENST00000372447 BRD4O60885 1362 aaPredicted RBP21.74■■□□□ 1.07
C9orf78-201ENST00000372447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.74■■□□□ 1.07
C9orf78-201ENST00000372447 MRS2Q9HD23 443 aa21.74■■□□□ 1.07
C9orf78-201ENST00000372447 TRPM3Q9HCF6 1732 aaPredicted RBP21.73■■□□□ 1.07
C9orf78-201ENST00000372447 LMOD2Q6P5Q4 547 aa21.73■■□□□ 1.07
C9orf78-201ENST00000372447 EDC4Q6P2E9 1401 aaKnown RBP21.72■■□□□ 1.07
C9orf78-201ENST00000372447 MON2Q7Z3U7 1717 aa21.72■■□□□ 1.07
C9orf78-201ENST00000372447 TNS3Q68CZ2 1445 aa21.72■■□□□ 1.07
C9orf78-201ENST00000372447 ILDR1Q86SU0 546 aaPredicted RBP21.71■■□□□ 1.07
C9orf78-201ENST00000372447 ABTB2Q8N961 1025 aa21.71■■□□□ 1.07
C9orf78-201ENST00000372447 NSD3Q9BZ95 1437 aa21.7■■□□□ 1.06
C9orf78-201ENST00000372447 TTC21AQ8NDW8 1320 aa21.7■■□□□ 1.06
C9orf78-201ENST00000372447 NRKQ7Z2Y5 1582 aa21.7■■□□□ 1.06
C9orf78-201ENST00000372447 NUTM2GQ5VZR2 741 aa21.69■■□□□ 1.06
C9orf78-201ENST00000372447 PER1O15534 1290 aaPredicted RBP21.69■■□□□ 1.06
C9orf78-201ENST00000372447 HNRNPUQ00839 825 aaKnown RBP eCLIP21.69■■□□□ 1.06
C9orf78-201ENST00000372447 NME9Q86XW9 330 aa21.69■■□□□ 1.06
C9orf78-201ENST00000372447 ARHGEF10O15013 1369 aa21.67■■□□□ 1.06
C9orf78-201ENST00000372447 PNPLA6Q8IY17 1366 aa21.67■■□□□ 1.06
C9orf78-201ENST00000372447 ALS2Q96Q42 1657 aa21.67■■□□□ 1.06
C9orf78-201ENST00000372447 JCADQ9P266 1359 aa21.67■■□□□ 1.06
C9orf78-201ENST00000372447 FYB1O15117 783 aa21.66■■□□□ 1.06
C9orf78-201ENST00000372447 NLRP6P59044 892 aa21.66■■□□□ 1.06
C9orf78-201ENST00000372447 ZRANB1Q9UGI0 708 aa21.66■■□□□ 1.06
C9orf78-201ENST00000372447 KNSTRNQ9Y448 316 aa21.66■■□□□ 1.06
C9orf78-201ENST00000372447 PLEKHG5O94827 1062 aa21.65■■□□□ 1.06
C9orf78-201ENST00000372447 CNGB1Q14028 1251 aaPredicted RBP21.65■■□□□ 1.06
C9orf78-201ENST00000372447 FAM9BQ8IZU0 186 aa21.64■■□□□ 1.06
C9orf78-201ENST00000372447 CABLES1Q8TDN4 633 aa21.64■■□□□ 1.06
C9orf78-201ENST00000372447 NLRP13Q86W25 1043 aa21.64■■□□□ 1.05
C9orf78-201ENST00000372447 GGNBP2Q9H3C7 697 aa21.64■■□□□ 1.05
C9orf78-201ENST00000372447 CGNL1Q0VF96 1302 aa21.63■■□□□ 1.05
C9orf78-201ENST00000372447 PIK3C2AO00443 1686 aa21.62■■□□□ 1.05
C9orf78-201ENST00000372447 RALBP1Q15311 655 aa21.61■■□□□ 1.05
C9orf78-201ENST00000372447 USP31Q70CQ4 1352 aa21.61■■□□□ 1.05
C9orf78-201ENST00000372447 AMER1Q5JTC6 1135 aaPredicted RBP21.61■■□□□ 1.05
C9orf78-201ENST00000372447 SHPRHQ149N8 1683 aa21.59■■□□□ 1.05
C9orf78-201ENST00000372447 USP19O94966 1318 aa21.59■■□□□ 1.05
C9orf78-201ENST00000372447 COG3Q96JB2 828 aa21.59■■□□□ 1.05
C9orf78-201ENST00000372447 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.05
C9orf78-201ENST00000372447 MED1Q15648 1581 aaPredicted RBP21.58■■□□□ 1.05
C9orf78-201ENST00000372447 NUTM2BA6NNL0 878 aaPredicted RBP21.58■■□□□ 1.04
C9orf78-201ENST00000372447 NUTM2EB1AL46 878 aaPredicted RBP21.58■■□□□ 1.04
C9orf78-201ENST00000372447 NUTM2AQ8IVF1 878 aaPredicted RBP21.58■■□□□ 1.04
C9orf78-201ENST00000372447 SUPT16HQ9Y5B9 1047 aaKnown RBP21.58■■□□□ 1.04
C9orf78-201ENST00000372447 OVOS2A0A0J9YW53 1432 aa21.58■■□□□ 1.04
C9orf78-201ENST00000372447 OVOS2Q6IE36 1432 aa21.58■■□□□ 1.04
C9orf78-201ENST00000372447 SPATA31A6Q5VVP1 1343 aa21.57■■□□□ 1.04
C9orf78-201ENST00000372447 MYBBP1AQ9BQG0 1328 aaKnown RBP21.57■■□□□ 1.04
C9orf78-201ENST00000372447 GCP02774 474 aa21.56■■□□□ 1.04
C9orf78-201ENST00000372447 CC2D1BQ5T0F9 858 aaKnown RBP21.56■■□□□ 1.04
C9orf78-201ENST00000372447 MARF1Q9Y4F3 1742 aaKnown RBP21.54■■□□□ 1.04
C9orf78-201ENST00000372447 SOX12O15370 315 aa21.54■■□□□ 1.04
C9orf78-201ENST00000372447 HAP1P54257 671 aaPredicted RBP21.54■■□□□ 1.04
C9orf78-201ENST00000372447 NSD2O96028 1365 aa21.54■■□□□ 1.04
C9orf78-201ENST00000372447 PARD3Q8TEW0 1356 aa21.54■■□□□ 1.04
C9orf78-201ENST00000372447 KIF20BQ96Q89 1820 aa21.54■■□□□ 1.04
C9orf78-201ENST00000372447 FBLN1P23142 703 aa21.53■■□□□ 1.04
C9orf78-201ENST00000372447 NPC1L1Q9UHC9 1359 aa21.53■■□□□ 1.04
C9orf78-201ENST00000372447 SLIT3O75094 1523 aa21.52■■□□□ 1.04
C9orf78-201ENST00000372447 CRYBG1Q9Y4K1 1723 aa21.52■■□□□ 1.04
C9orf78-201ENST00000372447 USP54Q70EL1 1684 aa21.52■■□□□ 1.04
C9orf78-201ENST00000372447 KCNH5Q8NCM2 988 aa21.52■■□□□ 1.04
C9orf78-201ENST00000372447 ZBED9Q6R2W3 1325 aa21.52■■□□□ 1.04
C9orf78-201ENST00000372447 ADAMTS2O95450 1211 aa21.51■■□□□ 1.03
C9orf78-201ENST00000372447 ZC3H6P61129 1189 aaKnown RBP21.51■■□□□ 1.03
C9orf78-201ENST00000372447 LRP6O75581 1613 aa21.51■■□□□ 1.03
C9orf78-201ENST00000372447 MORC1Q86VD1 984 aa21.51■■□□□ 1.03
C9orf78-201ENST00000372447 PNISRQ8TF01 805 aaKnown RBP21.51■■□□□ 1.03
C9orf78-201ENST00000372447 PHRF1Q9P1Y6 1649 aaKnown RBP21.5■■□□□ 1.03
C9orf78-201ENST00000372447 TNNT2P45379 298 aaPredicted RBP21.49■■□□□ 1.03
C9orf78-201ENST00000372447 ABCA3Q99758 1704 aa21.49■■□□□ 1.03
C9orf78-201ENST00000372447 NFAT5O94916 1531 aa21.47■■□□□ 1.03
C9orf78-201ENST00000372447 KIAA0232Q92628 1395 aa21.47■■□□□ 1.03
C9orf78-201ENST00000372447 FAM83GA6ND36 823 aa21.46■■□□□ 1.03
C9orf78-201ENST00000372447 ARHGEF25Q86VW2 580 aa21.46■■□□□ 1.03
C9orf78-201ENST00000372447 ANKRD26Q9UPS8 1709 aa21.45■■□□□ 1.02
C9orf78-201ENST00000372447 RRS1Q15050 365 aaKnown RBP21.45■■□□□ 1.02
C9orf78-201ENST00000372447 PRDM11Q9NQV5 511 aa21.45■■□□□ 1.02
C9orf78-201ENST00000372447 CPDO75976 1380 aa21.45■■□□□ 1.02
C9orf78-201ENST00000372447 ZBTB7CA1YPR0 619 aa21.44■■□□□ 1.02
C9orf78-201ENST00000372447 NEFLP07196 543 aa21.44■■□□□ 1.02
C9orf78-201ENST00000372447 CHRNA2Q15822 529 aa21.44■■□□□ 1.02
C9orf78-201ENST00000372447 MEX3CQ5U5Q3 659 aaKnown RBP21.44■■□□□ 1.02
C9orf78-201ENST00000372447 FKBP8Q14318 412 aa21.43■■□□□ 1.02
C9orf78-201ENST00000372447 AATKQ6ZMQ8 1374 aa21.43■■□□□ 1.02
C9orf78-201ENST00000372447 MAP3K19Q56UN5 1328 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms