RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 SSH2Q76I76 1423 aa23.3■■□□□ 1.32
SSBP3-203ENST00000371319 PDE3BQ13370 1112 aa23.3■■□□□ 1.32
SSBP3-203ENST00000371319 CCDC146Q8IYE0 955 aa23.3■■□□□ 1.32
SSBP3-203ENST00000371319 ZRANB1Q9UGI0 708 aa23.3■■□□□ 1.32
SSBP3-203ENST00000371319 ADGRL3Q9HAR2 1447 aa23.29■■□□□ 1.32
SSBP3-203ENST00000371319 TTC21BQ7Z4L5 1316 aa23.29■■□□□ 1.32
SSBP3-203ENST00000371319 MAP2P11137 1827 aaKnown RBP23.29■■□□□ 1.32
SSBP3-203ENST00000371319 PNPLA6Q8IY17 1366 aa23.28■■□□□ 1.32
SSBP3-203ENST00000371319 FKBP8Q14318 412 aa23.27■■□□□ 1.32
SSBP3-203ENST00000371319 AATKQ6ZMQ8 1374 aa23.26■■□□□ 1.31
SSBP3-203ENST00000371319 ZNF521Q96K83 1311 aa23.25■■□□□ 1.31
SSBP3-203ENST00000371319 NEFLP07196 543 aa23.25■■□□□ 1.31
SSBP3-203ENST00000371319 PMFBP1Q8TBY8 1022 aa23.25■■□□□ 1.31
SSBP3-203ENST00000371319 RBM33Q96EV2 1170 aaKnown RBP23.24■■□□□ 1.31
SSBP3-203ENST00000371319 COG3Q96JB2 828 aa23.24■■□□□ 1.31
SSBP3-203ENST00000371319 POLKQ9UBT6 870 aa23.24■■□□□ 1.31
SSBP3-203ENST00000371319 IQSEC2Q5JU85 1478 aa23.24■■□□□ 1.31
SSBP3-203ENST00000371319 OVOS2A0A0J9YW53 1432 aa23.24■■□□□ 1.31
SSBP3-203ENST00000371319 OVOS2Q6IE36 1432 aa23.24■■□□□ 1.31
SSBP3-203ENST00000371319 APAF1O14727 1248 aa23.23■■□□□ 1.31
SSBP3-203ENST00000371319 CDCA7LQ96GN5 454 aa23.23■■□□□ 1.31
SSBP3-203ENST00000371319 STRCP1A6NGW2 1772 aa23.22■■□□□ 1.31
SSBP3-203ENST00000371319 FBLN1P23142 703 aa23.22■■□□□ 1.31
SSBP3-203ENST00000371319 LMTK3Q96Q04 1460 aa23.21■■□□□ 1.31
SSBP3-203ENST00000371319 TTC21AQ8NDW8 1320 aa23.21■■□□□ 1.31
SSBP3-203ENST00000371319 HSPA2P54652 639 aa23.2■■□□□ 1.3
SSBP3-203ENST00000371319 NGDNQ8NEJ9 315 aaKnown RBP23.2■■□□□ 1.3
SSBP3-203ENST00000371319 RUNDC1Q96C34 613 aa23.2■■□□□ 1.3
SSBP3-203ENST00000371319 CDK12Q9NYV4 1490 aaPredicted RBP23.2■■□□□ 1.3
SSBP3-203ENST00000371319 PIK3C2AO00443 1686 aa23.19■■□□□ 1.3
SSBP3-203ENST00000371319 U2AF1L5P0DN76 240 aaPredicted RBP23.18■■□□□ 1.3
SSBP3-203ENST00000371319 U2AF1Q01081 240 aaKnown RBP eCLIP23.18■■□□□ 1.3
SSBP3-203ENST00000371319 NGEFQ8N5V2 710 aa23.18■■□□□ 1.3
SSBP3-203ENST00000371319 USP31Q70CQ4 1352 aa23.17■■□□□ 1.3
SSBP3-203ENST00000371319 STRCQ7RTU9 1775 aa23.17■■□□□ 1.3
SSBP3-203ENST00000371319 USP54Q70EL1 1684 aa23.17■■□□□ 1.3
SSBP3-203ENST00000371319 DIAPH1O60610 1272 aaKnown RBP23.17■■□□□ 1.3
SSBP3-203ENST00000371319 EMILIN1Q9Y6C2 1016 aa23.17■■□□□ 1.3
SSBP3-203ENST00000371319 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
SSBP3-203ENST00000371319 MARF1Q9Y4F3 1742 aaKnown RBP23.16■■□□□ 1.3
SSBP3-203ENST00000371319 PROSER2Q86WR7 435 aaPredicted RBP23.15■■□□□ 1.3
SSBP3-203ENST00000371319 PHF8Q9UPP1 1060 aa23.14■■□□□ 1.29
SSBP3-203ENST00000371319 U2SURPO15042 1029 aaKnown RBP23.13■■□□□ 1.29
SSBP3-203ENST00000371319 PPM1GO15355 546 aaPredicted RBP23.12■■□□□ 1.29
SSBP3-203ENST00000371319 GOLGA2Q08379 1002 aa23.12■■□□□ 1.29
SSBP3-203ENST00000371319 RRS1Q15050 365 aaKnown RBP23.12■■□□□ 1.29
SSBP3-203ENST00000371319 C14orf37Q86TY3 774 aa23.12■■□□□ 1.29
SSBP3-203ENST00000371319 TCP11L2Q8N4U5 519 aa23.12■■□□□ 1.29
SSBP3-203ENST00000371319 PLEKHF1Q96S99 279 aa23.12■■□□□ 1.29
SSBP3-203ENST00000371319 PEAK1Q9H792 1746 aa23.12■■□□□ 1.29
SSBP3-203ENST00000371319 IRX6P78412 446 aaPredicted RBP23.11■■□□□ 1.29
SSBP3-203ENST00000371319 SLFN5Q08AF3 891 aa23.1■■□□□ 1.29
SSBP3-203ENST00000371319 LRRC7Q96NW7 1537 aa23.1■■□□□ 1.29
SSBP3-203ENST00000371319 NCBP3Q53F19 620 aaKnown RBP23.1■■□□□ 1.29
SSBP3-203ENST00000371319 TRMT2AQ8IZ69 625 aaKnown RBP23.1■■□□□ 1.29
SSBP3-203ENST00000371319 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
SSBP3-203ENST00000371319 IL13P35225 146 aa23.09■■□□□ 1.29
SSBP3-203ENST00000371319 DUSP27Q5VZP5 1158 aa23.09■■□□□ 1.29
SSBP3-203ENST00000371319 NCOA3Q9Y6Q9 1424 aa23.08■■□□□ 1.28
SSBP3-203ENST00000371319 WWC1Q8IX03 1113 aa23.07■■□□□ 1.28
SSBP3-203ENST00000371319 RCAN3Q9UKA8 241 aa23.07■■□□□ 1.28
SSBP3-203ENST00000371319 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
SSBP3-203ENST00000371319 CCDC27Q2M243 656 aa23.06■■□□□ 1.28
SSBP3-203ENST00000371319 ESCO1Q5FWF5 840 aa23.06■■□□□ 1.28
SSBP3-203ENST00000371319 SPINK5Q9NQ38 1064 aaPredicted RBP23.06■■□□□ 1.28
SSBP3-203ENST00000371319 DMRT2Q9Y5R5 561 aa23.06■■□□□ 1.28
SSBP3-203ENST00000371319 TMEM94Q12767 1356 aa23.06■■□□□ 1.28
SSBP3-203ENST00000371319 C19orf44Q9H6X5 657 aa23.06■■□□□ 1.28
SSBP3-203ENST00000371319 KIF1AQ12756 1690 aa23.05■■□□□ 1.28
SSBP3-203ENST00000371319 ERICH6BQ5W0A0 696 aa23.05■■□□□ 1.28
SSBP3-203ENST00000371319 C1orf167Q5SNV9 1468 aa23.04■■□□□ 1.28
SSBP3-203ENST00000371319 XIRP1Q702N8 1843 aaKnown RBP23.04■■□□□ 1.28
SSBP3-203ENST00000371319 FCHSD2O94868 740 aa23.04■■□□□ 1.28
SSBP3-203ENST00000371319 RSPH6AQ9H0K4 717 aa23.04■■□□□ 1.28
SSBP3-203ENST00000371319 E9PSI1 815 aa23.03■■□□□ 1.28
SSBP3-203ENST00000371319 NEUROD2Q15784 382 aa23.03■■□□□ 1.28
SSBP3-203ENST00000371319 ORAI2Q96SN7 254 aa23.03■■□□□ 1.28
SSBP3-203ENST00000371319 DCCP43146 1447 aa23.03■■□□□ 1.28
SSBP3-203ENST00000371319 PNNQ9H307 717 aaKnown RBP23.02■■□□□ 1.28
SSBP3-203ENST00000371319 NLRP6P59044 892 aa23.01■■□□□ 1.27
SSBP3-203ENST00000371319 RGPD1P0DJD0 1748 aa23.01■■□□□ 1.27
SSBP3-203ENST00000371319 TRPM3Q9HCF6 1732 aaPredicted RBP23.01■■□□□ 1.27
SSBP3-203ENST00000371319 MST1RQ04912 1400 aa23■■□□□ 1.27
SSBP3-203ENST00000371319 MAP3K19Q56UN5 1328 aa23■■□□□ 1.27
SSBP3-203ENST00000371319 MAPK8IP3Q9UPT6 1336 aa23■■□□□ 1.27
SSBP3-203ENST00000371319 TMPOP42166 694 aaKnown RBP23■■□□□ 1.27
SSBP3-203ENST00000371319 RRP1P56182 461 aaKnown RBP23■■□□□ 1.27
SSBP3-203ENST00000371319 WDR63Q8IWG1 891 aa23■■□□□ 1.27
SSBP3-203ENST00000371319 PAK3O75914 559 aaPredicted RBP22.99■■□□□ 1.27
SSBP3-203ENST00000371319 EIF4A2Q14240 407 aaKnown RBP22.99■■□□□ 1.27
SSBP3-203ENST00000371319 ABTB2Q8N961 1025 aa22.99■■□□□ 1.27
SSBP3-203ENST00000371319 SBNO1A3KN83 1393 aa22.98■■□□□ 1.27
SSBP3-203ENST00000371319 SOX12O15370 315 aa22.98■■□□□ 1.27
SSBP3-203ENST00000371319 PRKAR2BP31323 418 aa22.98■■□□□ 1.27
SSBP3-203ENST00000371319 PSME1Q06323 249 aa22.98■■□□□ 1.27
SSBP3-203ENST00000371319 NUTM2GQ5VZR2 741 aa22.98■■□□□ 1.27
SSBP3-203ENST00000371319 HMOX1P09601 288 aa22.97■■□□□ 1.27
SSBP3-203ENST00000371319 HSP90AB2PQ58FF8 381 aa22.96■■□□□ 1.27
SSBP3-203ENST00000371319 TRIM35Q9UPQ4 493 aa22.96■■□□□ 1.27
SSBP3-203ENST00000371319 FLT4P35916 1363 aa22.95■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms